RNA–Protein interactions for RNA: ENST00000595789.5

XRCC1-205, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 1,147 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-205ENST00000595789 NISCHQ9Y2I1 1504 aa37.38■■■■□ 3.57
XRCC1-205ENST00000595789 ABCC9O60706 1549 aa33.54■■■□□ 2.96
XRCC1-205ENST00000595789 CCDC180Q9P1Z9 1646 aa33.45■■■□□ 2.95
XRCC1-205ENST00000595789 RB1CC1Q8TDY2 1594 aa31.88■■■□□ 2.69
XRCC1-205ENST00000595789 NACADO15069 1562 aa31.68■■■□□ 2.66
XRCC1-205ENST00000595789 DNAJC5BQ9UF47 199 aa31.61■■■□□ 2.65
XRCC1-205ENST00000595789 DCAF8L2P0C7V8 631 aa31.54■■■□□ 2.64
XRCC1-205ENST00000595789 MYO15BQ96JP2 1530 aa31.29■■■□□ 2.6
XRCC1-205ENST00000595789 PABPN1Q86U42 306 aaKnown RBP eCLIP31.28■■■□□ 2.6
XRCC1-205ENST00000595789 UNC13AQ9UPW8 1703 aa31.12■■■□□ 2.57
XRCC1-205ENST00000595789 BICRAQ9NZM4 1560 aa31.02■■■□□ 2.56
XRCC1-205ENST00000595789 ZCCHC6Q5VYS8 1495 aaKnown RBP30.96■■■□□ 2.55
XRCC1-205ENST00000595789 DCAF1Q9Y4B6 1507 aa30.88■■■□□ 2.53
XRCC1-205ENST00000595789 SHROOM4Q9ULL8 1493 aa30.56■■■□□ 2.48
XRCC1-205ENST00000595789 SCRIBQ14160 1630 aa30.48■■■□□ 2.47
XRCC1-205ENST00000595789 CC2D2AQ9P2K1 1620 aa30.28■■■□□ 2.44
XRCC1-205ENST00000595789 CECR2Q9BXF3 1484 aa30.23■■■□□ 2.43
XRCC1-205ENST00000595789 EIF4G1Q04637 1599 aaKnown RBP30.22■■■□□ 2.43
XRCC1-205ENST00000595789 NCAPD3P42695 1498 aa29.32■■■□□ 2.28
XRCC1-205ENST00000595789 ATAD2BQ9ULI0 1458 aa29.21■■■□□ 2.27
XRCC1-205ENST00000595789 SMARCA4P51532 1647 aa29.11■■■□□ 2.25
XRCC1-205ENST00000595789 SMARCA2P51531 1590 aa29.07■■■□□ 2.24
XRCC1-205ENST00000595789 HMGXB3Q12766 1538 aa29.03■■■□□ 2.24
XRCC1-205ENST00000595789 DNAJC5Q9H3Z4 198 aa29■■■□□ 2.23
XRCC1-205ENST00000595789 BAZ1AQ9NRL2 1556 aaPredicted RBP28.96■■■□□ 2.23
XRCC1-205ENST00000595789 ERCC6Q03468 1493 aa28.91■■■□□ 2.22
XRCC1-205ENST00000595789 CUX2O14529 1486 aa28.91■■■□□ 2.22
XRCC1-205ENST00000595789 PEG3Q9GZU2 1588 aa28.88■■■□□ 2.21
XRCC1-205ENST00000595789 BAZ1BQ9UIG0 1483 aaKnown RBP28.87■■■□□ 2.21
XRCC1-205ENST00000595789 NESP48681 1621 aa28.83■■■□□ 2.21
XRCC1-205ENST00000595789 MROH2BQ7Z745 1585 aa28.8■■■□□ 2.2
XRCC1-205ENST00000595789 LAMC3Q9Y6N6 1575 aa28.58■■■□□ 2.17
XRCC1-205ENST00000595789 THOC2Q8NI27 1593 aaKnown RBP28.49■■■□□ 2.15
XRCC1-205ENST00000595789 PDS5BQ9NTI5 1447 aa28.44■■■□□ 2.14
XRCC1-205ENST00000595789 CADPSQ9ULU8 1353 aa28.42■■■□□ 2.14
XRCC1-205ENST00000595789 WIZO95785 1651 aa28.4■■■□□ 2.14
XRCC1-205ENST00000595789 KIF21AQ7Z4S6 1674 aa28.37■■■□□ 2.13
XRCC1-205ENST00000595789 RSF1Q96T23 1441 aaPredicted RBP28.23■■■□□ 2.11
XRCC1-205ENST00000595789 MRC2Q9UBG0 1479 aa28.19■■■□□ 2.1
XRCC1-205ENST00000595789 WDR62O43379 1518 aa28.13■■■□□ 2.09
XRCC1-205ENST00000595789 CFTRP13569 1480 aa28.08■■■□□ 2.09
XRCC1-205ENST00000595789 FANCD2Q9BXW9 1451 aa28.06■■■□□ 2.08
XRCC1-205ENST00000595789 TOP2AP11388 1531 aaKnown RBP28.06■■■□□ 2.08
XRCC1-205ENST00000595789 CEP164Q9UPV0 1460 aa28.05■■■□□ 2.08
XRCC1-205ENST00000595789 URB2Q14146 1524 aaKnown RBP27.84■■■□□ 2.05
XRCC1-205ENST00000595789 CCDC88BA6NC98 1476 aa27.79■■■□□ 2.04
XRCC1-205ENST00000595789 TRIM41Q8WV44 630 aa27.64■■■□□ 2.02
XRCC1-205ENST00000595789 PRDM2Q13029 1718 aa27.64■■■□□ 2.01
XRCC1-205ENST00000595789 OSCARQ8IYS5 282 aa27.63■■■□□ 2.01
XRCC1-205ENST00000595789 TOPBP1Q92547 1522 aa27.52■■■□□ 2
XRCC1-205ENST00000595789 IFT140Q96RY7 1462 aa27.52■■■□□ 2
XRCC1-205ENST00000595789 ZNF608Q9ULD9 1512 aaPredicted RBP27.51■■□□□ 1.99
XRCC1-205ENST00000595789 ABCC8Q09428 1581 aa27.45■■□□□ 1.99
XRCC1-205ENST00000595789 DNMBPQ6XZF7 1577 aa27.39■■□□□ 1.98
XRCC1-205ENST00000595789 TARBP1Q13395 1621 aaKnown RBP27.28■■□□□ 1.96
XRCC1-205ENST00000595789 EIF4G3O43432 1585 aaKnown RBP27.27■■□□□ 1.96
XRCC1-205ENST00000595789 AQRO60306 1485 aaKnown RBP eCLIP27.26■■□□□ 1.956e-6■■■■□ 25.1
XRCC1-205ENST00000595789 POLA1P09884 1462 aaPredicted RBP27.25■■□□□ 1.95
XRCC1-205ENST00000595789 RIMBP3CA6NJZ7 1639 aa27.19■■□□□ 1.94
XRCC1-205ENST00000595789 RIMBP3BA6NNM3 1639 aa27.19■■□□□ 1.94
XRCC1-205ENST00000595789 RIMBP3Q9UFD9 1639 aa27.19■■□□□ 1.94
XRCC1-205ENST00000595789 RAD54L2Q9Y4B4 1467 aa27.17■■□□□ 1.94
XRCC1-205ENST00000595789 ARHGEF11O15085 1522 aa27.15■■□□□ 1.94
XRCC1-205ENST00000595789 SOGA1O94964 1423 aa27.14■■□□□ 1.93
XRCC1-205ENST00000595789 TDRD9Q8NDG6 1382 aaKnown RBP27.1■■□□□ 1.93
XRCC1-205ENST00000595789 FGD5Q6ZNL6 1462 aa27.06■■□□□ 1.92
XRCC1-205ENST00000595789 FBLN2P98095 1184 aa27.05■■□□□ 1.92
XRCC1-205ENST00000595789 CUX1P39880 1505 aa27.05■■□□□ 1.92
XRCC1-205ENST00000595789 CHD1O14646 1710 aa27.04■■□□□ 1.92
XRCC1-205ENST00000595789 CYB5RLQ6IPT4 315 aa26.99■■□□□ 1.91
XRCC1-205ENST00000595789 WDR97A6NE52 1622 aa26.95■■□□□ 1.91
XRCC1-205ENST00000595789 SUPT5HO00267 1087 aaKnown RBP26.94■■□□□ 1.9
XRCC1-205ENST00000595789 SNAPC4Q5SXM2 1469 aa26.93■■□□□ 1.9
XRCC1-205ENST00000595789 ARAP1Q96P48 1450 aa26.89■■□□□ 1.9
XRCC1-205ENST00000595789 GRIN2BQ13224 1484 aa26.88■■□□□ 1.89
XRCC1-205ENST00000595789 MAGI1Q96QZ7 1491 aaPredicted RBP26.87■■□□□ 1.89
XRCC1-205ENST00000595789 CHMP7Q8WUX9 453 aaPredicted RBP26.87■■□□□ 1.89
XRCC1-205ENST00000595789 CLASP1Q7Z460 1538 aa26.82■■□□□ 1.88
XRCC1-205ENST00000595789 SYNJ2O15056 1496 aa26.8■■□□□ 1.88
XRCC1-205ENST00000595789 GAPVD1Q14C86 1478 aa26.79■■□□□ 1.88
XRCC1-205ENST00000595789 ABCA10Q8WWZ4 1543 aa26.78■■□□□ 1.88
XRCC1-205ENST00000595789 SYNJ1O43426 1573 aa26.75■■□□□ 1.87
XRCC1-205ENST00000595789 ABCA5Q8WWZ7 1642 aa26.69■■□□□ 1.86
XRCC1-205ENST00000595789 PBRM1Q86U86 1689 aa26.67■■□□□ 1.86
XRCC1-205ENST00000595789 WRNQ14191 1432 aaPredicted RBP eCLIP26.65■■□□□ 1.86
XRCC1-205ENST00000595789 TRHP20396 242 aaPredicted RBP26.64■■□□□ 1.86
XRCC1-205ENST00000595789 TOP2BQ02880 1626 aa26.58■■□□□ 1.85
XRCC1-205ENST00000595789 BIVM-ERCC5R4GMW8 1640 aa26.56■■□□□ 1.84
XRCC1-205ENST00000595789 GRIN2AQ12879 1464 aa26.54■■□□□ 1.84
XRCC1-205ENST00000595789 NUP160Q12769 1436 aa26.48■■□□□ 1.83
XRCC1-205ENST00000595789 ADAMTS12P58397 1594 aa26.48■■□□□ 1.83
XRCC1-205ENST00000595789 FHAD1B1AJZ9 1412 aa26.46■■□□□ 1.83
XRCC1-205ENST00000595789 CEP170Q5SW79 1584 aa26.43■■□□□ 1.82
XRCC1-205ENST00000595789 ERCC6L2Q5T890 1561 aa26.41■■□□□ 1.82
XRCC1-205ENST00000595789 ERICH3Q5RHP9 1530 aa26.41■■□□□ 1.82
XRCC1-205ENST00000595789 SHROOM2Q13796 1616 aa26.32■■□□□ 1.8
XRCC1-205ENST00000595789 JPH4Q96JJ6 628 aa26.23■■□□□ 1.79
XRCC1-205ENST00000595789 PRG4Q92954 1404 aaPredicted RBP26.21■■□□□ 1.79
XRCC1-205ENST00000595789 IGF1RP08069 1367 aa26.16■■□□□ 1.78
XRCC1-205ENST00000595789 RUSC2Q8N2Y8 1516 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms