RNA–Protein interactions for RNA: ENST00000595596.1

GRAMD1A-205, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 881 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-205ENST00000595596 NISCHQ9Y2I1 1504 aa47.51■■■■■ 5.2
GRAMD1A-205ENST00000595596 ABCC9O60706 1549 aa42.92■■■■■ 4.46
GRAMD1A-205ENST00000595596 CCDC180Q9P1Z9 1646 aa42.79■■■■■ 4.44
GRAMD1A-205ENST00000595596 RB1CC1Q8TDY2 1594 aa40.84■■■■■ 4.13
GRAMD1A-205ENST00000595596 NACADO15069 1562 aa40.5■■■■■ 4.07
GRAMD1A-205ENST00000595596 DNAJC5BQ9UF47 199 aa40.43■■■■■ 4.06
GRAMD1A-205ENST00000595596 DCAF8L2P0C7V8 631 aa40.24■■■■■ 4.03
GRAMD1A-205ENST00000595596 PABPN1Q86U42 306 aaKnown RBP eCLIP39.92■■■■□ 3.982e-6■■□□□ 11.5
GRAMD1A-205ENST00000595596 UNC13AQ9UPW8 1703 aa39.89■■■■□ 3.98
GRAMD1A-205ENST00000595596 MYO15BQ96JP2 1530 aa39.87■■■■□ 3.97
GRAMD1A-205ENST00000595596 BICRAQ9NZM4 1560 aa39.57■■■■□ 3.92
GRAMD1A-205ENST00000595596 ZCCHC6Q5VYS8 1495 aaKnown RBP39.3■■■■□ 3.88
GRAMD1A-205ENST00000595596 DCAF1Q9Y4B6 1507 aa39.26■■■■□ 3.88
GRAMD1A-205ENST00000595596 SHROOM4Q9ULL8 1493 aa39.11■■■■□ 3.85
GRAMD1A-205ENST00000595596 SCRIBQ14160 1630 aa38.89■■■■□ 3.82
GRAMD1A-205ENST00000595596 CC2D2AQ9P2K1 1620 aa38.79■■■■□ 3.8
GRAMD1A-205ENST00000595596 CECR2Q9BXF3 1484 aa38.72■■■■□ 3.79
GRAMD1A-205ENST00000595596 EIF4G1Q04637 1599 aaKnown RBP38.65■■■■□ 3.78
GRAMD1A-205ENST00000595596 DNAJC5Q9H3Z4 198 aa37.39■■■■□ 3.58
GRAMD1A-205ENST00000595596 NCAPD3P42695 1498 aa37.37■■■■□ 3.57
GRAMD1A-205ENST00000595596 ATAD2BQ9ULI0 1458 aa37.2■■■■□ 3.54
GRAMD1A-205ENST00000595596 CUX2O14529 1486 aa37.15■■■■□ 3.54
GRAMD1A-205ENST00000595596 SMARCA2P51531 1590 aa37.13■■■■□ 3.53
GRAMD1A-205ENST00000595596 ERCC6Q03468 1493 aa37.13■■■■□ 3.53
GRAMD1A-205ENST00000595596 SMARCA4P51532 1647 aa37.1■■■■□ 3.53
GRAMD1A-205ENST00000595596 HMGXB3Q12766 1538 aa37.07■■■■□ 3.53
GRAMD1A-205ENST00000595596 BAZ1AQ9NRL2 1556 aaPredicted RBP36.92■■■■□ 3.5
GRAMD1A-205ENST00000595596 BAZ1BQ9UIG0 1483 aaKnown RBP36.84■■■■□ 3.49
GRAMD1A-205ENST00000595596 NESP48681 1621 aa36.78■■■■□ 3.48
GRAMD1A-205ENST00000595596 PEG3Q9GZU2 1588 aa36.76■■■■□ 3.48
GRAMD1A-205ENST00000595596 LAMC3Q9Y6N6 1575 aa36.59■■■■□ 3.45
GRAMD1A-205ENST00000595596 MROH2BQ7Z745 1585 aa36.57■■■■□ 3.44
GRAMD1A-205ENST00000595596 THOC2Q8NI27 1593 aaKnown RBP36.49■■■■□ 3.43
GRAMD1A-205ENST00000595596 PDS5BQ9NTI5 1447 aa36.4■■■■□ 3.42
GRAMD1A-205ENST00000595596 KIF21AQ7Z4S6 1674 aa36.36■■■■□ 3.41
GRAMD1A-205ENST00000595596 CADPSQ9ULU8 1353 aa36.22■■■■□ 3.39
GRAMD1A-205ENST00000595596 WIZO95785 1651 aa36.14■■■■□ 3.38
GRAMD1A-205ENST00000595596 MRC2Q9UBG0 1479 aa36.05■■■■□ 3.36
GRAMD1A-205ENST00000595596 WDR62O43379 1518 aa35.95■■■■□ 3.35
GRAMD1A-205ENST00000595596 CEP164Q9UPV0 1460 aa35.87■■■■□ 3.33
GRAMD1A-205ENST00000595596 FANCD2Q9BXW9 1451 aa35.8■■■■□ 3.32
GRAMD1A-205ENST00000595596 CFTRP13569 1480 aa35.74■■■■□ 3.31
GRAMD1A-205ENST00000595596 RSF1Q96T23 1441 aaPredicted RBP35.74■■■■□ 3.31
GRAMD1A-205ENST00000595596 TOP2AP11388 1531 aaKnown RBP35.67■■■■□ 3.3
GRAMD1A-205ENST00000595596 TRIM41Q8WV44 630 aa35.63■■■■□ 3.29
GRAMD1A-205ENST00000595596 URB2Q14146 1524 aaKnown RBP35.48■■■■□ 3.27
GRAMD1A-205ENST00000595596 OSCARQ8IYS5 282 aa35.46■■■■□ 3.27
GRAMD1A-205ENST00000595596 PRDM2Q13029 1718 aa35.45■■■■□ 3.27
GRAMD1A-205ENST00000595596 CCDC88BA6NC98 1476 aa35.27■■■■□ 3.24
GRAMD1A-205ENST00000595596 IFT140Q96RY7 1462 aa35.17■■■■□ 3.22
GRAMD1A-205ENST00000595596 ABCC8Q09428 1581 aa35.09■■■■□ 3.21
GRAMD1A-205ENST00000595596 TOPBP1Q92547 1522 aa35.09■■■■□ 3.21
GRAMD1A-205ENST00000595596 ZNF608Q9ULD9 1512 aaPredicted RBP35.06■■■■□ 3.2
GRAMD1A-205ENST00000595596 DNMBPQ6XZF7 1577 aa34.96■■■■□ 3.19
GRAMD1A-205ENST00000595596 RIMBP3CA6NJZ7 1639 aa34.95■■■■□ 3.19
GRAMD1A-205ENST00000595596 RIMBP3BA6NNM3 1639 aa34.95■■■■□ 3.19
GRAMD1A-205ENST00000595596 RIMBP3Q9UFD9 1639 aa34.95■■■■□ 3.19
GRAMD1A-205ENST00000595596 EIF4G3O43432 1585 aaKnown RBP34.89■■■■□ 3.18
GRAMD1A-205ENST00000595596 ARHGEF11O15085 1522 aa34.81■■■■□ 3.16
GRAMD1A-205ENST00000595596 TARBP1Q13395 1621 aaKnown RBP34.79■■■■□ 3.16
GRAMD1A-205ENST00000595596 AQRO60306 1485 aaKnown RBP eCLIP34.75■■■■□ 3.154e-7■■■■■ 27.3
GRAMD1A-205ENST00000595596 CHD1O14646 1710 aa34.72■■■■□ 3.15
GRAMD1A-205ENST00000595596 POLA1P09884 1462 aaPredicted RBP34.7■■■■□ 3.15
GRAMD1A-205ENST00000595596 FBLN2P98095 1184 aa34.63■■■■□ 3.13
GRAMD1A-205ENST00000595596 CYB5RLQ6IPT4 315 aa34.6■■■■□ 3.13
GRAMD1A-205ENST00000595596 SOGA1O94964 1423 aa34.58■■■■□ 3.13
GRAMD1A-205ENST00000595596 RAD54L2Q9Y4B4 1467 aa34.56■■■■□ 3.12
GRAMD1A-205ENST00000595596 TDRD9Q8NDG6 1382 aaKnown RBP34.5■■■■□ 3.11
GRAMD1A-205ENST00000595596 WDR97A6NE52 1622 aa34.49■■■■□ 3.11
GRAMD1A-205ENST00000595596 FGD5Q6ZNL6 1462 aa34.46■■■■□ 3.11
GRAMD1A-205ENST00000595596 ARAP1Q96P48 1450 aa34.43■■■■□ 3.1
GRAMD1A-205ENST00000595596 SNAPC4Q5SXM2 1469 aa34.39■■■■□ 3.1
GRAMD1A-205ENST00000595596 CUX1P39880 1505 aa34.37■■■■□ 3.09
GRAMD1A-205ENST00000595596 CHMP7Q8WUX9 453 aaPredicted RBP34.36■■■■□ 3.09
GRAMD1A-205ENST00000595596 MAGI1Q96QZ7 1491 aaPredicted RBP34.33■■■■□ 3.09
GRAMD1A-205ENST00000595596 TRHP20396 242 aaPredicted RBP34.32■■■■□ 3.08
GRAMD1A-205ENST00000595596 GRIN2BQ13224 1484 aa34.31■■■■□ 3.08
GRAMD1A-205ENST00000595596 SYNJ1O43426 1573 aa34.29■■■■□ 3.08
GRAMD1A-205ENST00000595596 CLASP1Q7Z460 1538 aa34.27■■■■□ 3.08
GRAMD1A-205ENST00000595596 SYNJ2O15056 1496 aa34.21■■■■□ 3.07
GRAMD1A-205ENST00000595596 PBRM1Q86U86 1689 aa34.16■■■■□ 3.06
GRAMD1A-205ENST00000595596 GAPVD1Q14C86 1478 aa34.15■■■■□ 3.06
GRAMD1A-205ENST00000595596 ABCA10Q8WWZ4 1543 aa34.08■■■■□ 3.05
GRAMD1A-205ENST00000595596 SUPT5HO00267 1087 aaKnown RBP34.03■■■■□ 3.04
GRAMD1A-205ENST00000595596 ABCA5Q8WWZ7 1642 aa34.02■■■■□ 3.04
GRAMD1A-205ENST00000595596 WRNQ14191 1432 aaPredicted RBP eCLIP33.92■■■■□ 3.02
GRAMD1A-205ENST00000595596 GRIN2AQ12879 1464 aa33.84■■■■□ 3.01
GRAMD1A-205ENST00000595596 BIVM-ERCC5R4GMW8 1640 aa33.81■■■■□ 3
GRAMD1A-205ENST00000595596 TOP2BQ02880 1626 aa33.8■■■■□ 3
GRAMD1A-205ENST00000595596 ADAMTS12P58397 1594 aa33.77■■■■□ 3
GRAMD1A-205ENST00000595596 NUP160Q12769 1436 aa33.73■■■□□ 2.99
GRAMD1A-205ENST00000595596 FHAD1B1AJZ9 1412 aa33.71■■■□□ 2.99
GRAMD1A-205ENST00000595596 CEP170Q5SW79 1584 aa33.71■■■□□ 2.99
GRAMD1A-205ENST00000595596 ERCC6L2Q5T890 1561 aa33.68■■■□□ 2.98
GRAMD1A-205ENST00000595596 ERICH3Q5RHP9 1530 aa33.67■■■□□ 2.98
GRAMD1A-205ENST00000595596 SHROOM2Q13796 1616 aa33.62■■■□□ 2.97
GRAMD1A-205ENST00000595596 AEBP2Q6ZN18 517 aaPredicted RBP33.54■■■□□ 2.96
GRAMD1A-205ENST00000595596 PRG4Q92954 1404 aaPredicted RBP33.45■■■□□ 2.94
GRAMD1A-205ENST00000595596 JPH4Q96JJ6 628 aa33.44■■■□□ 2.94
GRAMD1A-205ENST00000595596 KIF13AQ9H1H9 1805 aa33.32■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms