RNA–Protein interactions for RNA: ENST00000595529.1

LTBP4-213, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-213ENST00000595529 NISCHQ9Y2I1 1504 aa36.33■■■■□ 3.41
LTBP4-213ENST00000595529 ABCC9O60706 1549 aa32.91■■■□□ 2.86
LTBP4-213ENST00000595529 CCDC180Q9P1Z9 1646 aa32.72■■■□□ 2.83
LTBP4-213ENST00000595529 RB1CC1Q8TDY2 1594 aa31.26■■■□□ 2.6
LTBP4-213ENST00000595529 DNAJC5BQ9UF47 199 aa31.12■■■□□ 2.57
LTBP4-213ENST00000595529 NACADO15069 1562 aa31■■■□□ 2.55
LTBP4-213ENST00000595529 DCAF8L2P0C7V8 631 aa30.66■■■□□ 2.5
LTBP4-213ENST00000595529 PABPN1Q86U42 306 aaKnown RBP eCLIP30.57■■■□□ 2.48
LTBP4-213ENST00000595529 MYO15BQ96JP2 1530 aa30.55■■■□□ 2.48
LTBP4-213ENST00000595529 UNC13AQ9UPW8 1703 aa30.5■■■□□ 2.47
LTBP4-213ENST00000595529 BICRAQ9NZM4 1560 aa30.36■■■□□ 2.45
LTBP4-213ENST00000595529 ZCCHC6Q5VYS8 1495 aaKnown RBP30.06■■■□□ 2.4
LTBP4-213ENST00000595529 DCAF1Q9Y4B6 1507 aa30.04■■■□□ 2.4
LTBP4-213ENST00000595529 SHROOM4Q9ULL8 1493 aa30■■■□□ 2.39
LTBP4-213ENST00000595529 CC2D2AQ9P2K1 1620 aa29.74■■■□□ 2.35
LTBP4-213ENST00000595529 SCRIBQ14160 1630 aa29.73■■■□□ 2.35
LTBP4-213ENST00000595529 CECR2Q9BXF3 1484 aa29.71■■■□□ 2.35
LTBP4-213ENST00000595529 EIF4G1Q04637 1599 aaKnown RBP29.63■■■□□ 2.33
LTBP4-213ENST00000595529 DNAJC5Q9H3Z4 198 aa28.8■■■□□ 2.2
LTBP4-213ENST00000595529 NCAPD3P42695 1498 aa28.64■■■□□ 2.17
LTBP4-213ENST00000595529 CUX2O14529 1486 aa28.54■■■□□ 2.16
LTBP4-213ENST00000595529 ATAD2BQ9ULI0 1458 aa28.48■■■□□ 2.15
LTBP4-213ENST00000595529 ERCC6Q03468 1493 aa28.45■■■□□ 2.14
LTBP4-213ENST00000595529 SMARCA2P51531 1590 aa28.4■■■□□ 2.14
LTBP4-213ENST00000595529 HMGXB3Q12766 1538 aa28.39■■■□□ 2.14
LTBP4-213ENST00000595529 SMARCA4P51532 1647 aa28.37■■■□□ 2.13
LTBP4-213ENST00000595529 BAZ1AQ9NRL2 1556 aaPredicted RBP28.21■■■□□ 2.11
LTBP4-213ENST00000595529 NESP48681 1621 aa28.2■■■□□ 2.1
LTBP4-213ENST00000595529 BAZ1BQ9UIG0 1483 aaKnown RBP28.18■■■□□ 2.1
LTBP4-213ENST00000595529 PEG3Q9GZU2 1588 aa28.15■■■□□ 2.1
LTBP4-213ENST00000595529 LAMC3Q9Y6N6 1575 aa28.01■■■□□ 2.07
LTBP4-213ENST00000595529 THOC2Q8NI27 1593 aaKnown RBP28■■■□□ 2.07
LTBP4-213ENST00000595529 MROH2BQ7Z745 1585 aa27.96■■■□□ 2.07
LTBP4-213ENST00000595529 PDS5BQ9NTI5 1447 aa27.86■■■□□ 2.05
LTBP4-213ENST00000595529 KIF21AQ7Z4S6 1674 aa27.81■■■□□ 2.04
LTBP4-213ENST00000595529 CADPSQ9ULU8 1353 aa27.73■■■□□ 2.03
LTBP4-213ENST00000595529 MRC2Q9UBG0 1479 aa27.62■■■□□ 2.01
LTBP4-213ENST00000595529 WIZO95785 1651 aa27.59■■■□□ 2.01
LTBP4-213ENST00000595529 WDR62O43379 1518 aa27.57■■■□□ 2
LTBP4-213ENST00000595529 CEP164Q9UPV0 1460 aa27.45■■□□□ 1.99
LTBP4-213ENST00000595529 FANCD2Q9BXW9 1451 aa27.4■■□□□ 1.98
LTBP4-213ENST00000595529 CFTRP13569 1480 aa27.38■■□□□ 1.97
LTBP4-213ENST00000595529 TRIM41Q8WV44 630 aa27.34■■□□□ 1.97
LTBP4-213ENST00000595529 RSF1Q96T23 1441 aaPredicted RBP27.3■■□□□ 1.96
LTBP4-213ENST00000595529 TOP2AP11388 1531 aaKnown RBP27.26■■□□□ 1.96
LTBP4-213ENST00000595529 URB2Q14146 1524 aaKnown RBP27.19■■□□□ 1.94
LTBP4-213ENST00000595529 OSCARQ8IYS5 282 aa27.16■■□□□ 1.94
LTBP4-213ENST00000595529 PRDM2Q13029 1718 aa27.03■■□□□ 1.92
LTBP4-213ENST00000595529 CCDC88BA6NC98 1476 aa26.94■■□□□ 1.9
LTBP4-213ENST00000595529 IFT140Q96RY7 1462 aa26.93■■□□□ 1.9
LTBP4-213ENST00000595529 ZNF608Q9ULD9 1512 aaPredicted RBP26.88■■□□□ 1.89
LTBP4-213ENST00000595529 TOPBP1Q92547 1522 aa26.85■■□□□ 1.89
LTBP4-213ENST00000595529 SUPT5HO00267 1087 aaKnown RBP26.83■■□□□ 1.89
LTBP4-213ENST00000595529 RIMBP3CA6NJZ7 1639 aa26.82■■□□□ 1.88
LTBP4-213ENST00000595529 RIMBP3BA6NNM3 1639 aa26.82■■□□□ 1.88
LTBP4-213ENST00000595529 RIMBP3Q9UFD9 1639 aa26.82■■□□□ 1.88
LTBP4-213ENST00000595529 ABCC8Q09428 1581 aa26.81■■□□□ 1.88
LTBP4-213ENST00000595529 DNMBPQ6XZF7 1577 aa26.74■■□□□ 1.87
LTBP4-213ENST00000595529 ARHGEF11O15085 1522 aa26.73■■□□□ 1.87
LTBP4-213ENST00000595529 EIF4G3O43432 1585 aaKnown RBP26.72■■□□□ 1.87
LTBP4-213ENST00000595529 TARBP1Q13395 1621 aaKnown RBP26.64■■□□□ 1.85
LTBP4-213ENST00000595529 AQRO60306 1485 aaKnown RBP eCLIP26.61■■□□□ 1.858e-9■■■■□ 24
LTBP4-213ENST00000595529 POLA1P09884 1462 aaPredicted RBP26.57■■□□□ 1.84
LTBP4-213ENST00000595529 CHD1O14646 1710 aa26.55■■□□□ 1.84
LTBP4-213ENST00000595529 CYB5RLQ6IPT4 315 aa26.51■■□□□ 1.83
LTBP4-213ENST00000595529 ARAP1Q96P48 1450 aa26.45■■□□□ 1.82
LTBP4-213ENST00000595529 RAD54L2Q9Y4B4 1467 aa26.44■■□□□ 1.82
LTBP4-213ENST00000595529 FBLN2P98095 1184 aa26.44■■□□□ 1.82
LTBP4-213ENST00000595529 SOGA1O94964 1423 aa26.43■■□□□ 1.82
LTBP4-213ENST00000595529 WDR97A6NE52 1622 aa26.4■■□□□ 1.82
LTBP4-213ENST00000595529 TDRD9Q8NDG6 1382 aaKnown RBP26.39■■□□□ 1.82
LTBP4-213ENST00000595529 FGD5Q6ZNL6 1462 aa26.35■■□□□ 1.81
LTBP4-213ENST00000595529 SNAPC4Q5SXM2 1469 aa26.34■■□□□ 1.81
LTBP4-213ENST00000595529 MAGI1Q96QZ7 1491 aaPredicted RBP26.3■■□□□ 1.8
LTBP4-213ENST00000595529 CUX1P39880 1505 aa26.29■■□□□ 1.8
LTBP4-213ENST00000595529 CLASP1Q7Z460 1538 aa26.29■■□□□ 1.8
LTBP4-213ENST00000595529 TRHP20396 242 aaPredicted RBP26.27■■□□□ 1.8
LTBP4-213ENST00000595529 GRIN2BQ13224 1484 aa26.25■■□□□ 1.79
LTBP4-213ENST00000595529 SYNJ1O43426 1573 aa26.24■■□□□ 1.79
LTBP4-213ENST00000595529 CHMP7Q8WUX9 453 aaPredicted RBP26.24■■□□□ 1.79
LTBP4-213ENST00000595529 SYNJ2O15056 1496 aa26.19■■□□□ 1.78
LTBP4-213ENST00000595529 GAPVD1Q14C86 1478 aa26.11■■□□□ 1.77
LTBP4-213ENST00000595529 PBRM1Q86U86 1689 aa26.09■■□□□ 1.77
LTBP4-213ENST00000595529 ABCA10Q8WWZ4 1543 aa26.07■■□□□ 1.76
LTBP4-213ENST00000595529 ABCA5Q8WWZ7 1642 aa26.04■■□□□ 1.76
LTBP4-213ENST00000595529 GRIN2AQ12879 1464 aa25.91■■□□□ 1.74
LTBP4-213ENST00000595529 WRNQ14191 1432 aaPredicted RBP eCLIP25.9■■□□□ 1.74
LTBP4-213ENST00000595529 ADAMTS12P58397 1594 aa25.86■■□□□ 1.73
LTBP4-213ENST00000595529 NUP160Q12769 1436 aa25.85■■□□□ 1.73
LTBP4-213ENST00000595529 ERCC6L2Q5T890 1561 aa25.82■■□□□ 1.72
LTBP4-213ENST00000595529 CEP170Q5SW79 1584 aa25.82■■□□□ 1.72
LTBP4-213ENST00000595529 TOP2BQ02880 1626 aa25.81■■□□□ 1.72
LTBP4-213ENST00000595529 BIVM-ERCC5R4GMW8 1640 aa25.81■■□□□ 1.72
LTBP4-213ENST00000595529 FHAD1B1AJZ9 1412 aa25.79■■□□□ 1.72
LTBP4-213ENST00000595529 SHROOM2Q13796 1616 aa25.76■■□□□ 1.71
LTBP4-213ENST00000595529 ERICH3Q5RHP9 1530 aa25.73■■□□□ 1.71
LTBP4-213ENST00000595529 AEBP2Q6ZN18 517 aaPredicted RBP25.7■■□□□ 1.7
LTBP4-213ENST00000595529 PRG4Q92954 1404 aaPredicted RBP25.58■■□□□ 1.69
LTBP4-213ENST00000595529 JPH4Q96JJ6 628 aa25.55■■□□□ 1.68
LTBP4-213ENST00000595529 KIF13AQ9H1H9 1805 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 179.6 ms