RNA–Protein interactions for RNA: ENST00000595194.1

GTPBP3-208, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 2

Gene GTPBP3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-208ENST00000595194 NISCHQ9Y2I1 1504 aa51.18■■■■■ 5.78
GTPBP3-208ENST00000595194 CCDC180Q9P1Z9 1646 aa45.75■■■■■ 4.91
GTPBP3-208ENST00000595194 ABCC9O60706 1549 aa45.53■■■■■ 4.88
GTPBP3-208ENST00000595194 RB1CC1Q8TDY2 1594 aa43.45■■■■■ 4.55
GTPBP3-208ENST00000595194 NACADO15069 1562 aa43.23■■■■■ 4.51
GTPBP3-208ENST00000595194 DCAF8L2P0C7V8 631 aa43.16■■■■■ 4.5
GTPBP3-208ENST00000595194 MYO15BQ96JP2 1530 aa42.73■■■■■ 4.43
GTPBP3-208ENST00000595194 DNAJC5BQ9UF47 199 aa42.5■■■■■ 4.39
GTPBP3-208ENST00000595194 PABPN1Q86U42 306 aaKnown RBP eCLIP42.48■■■■■ 4.39
GTPBP3-208ENST00000595194 ZCCHC6Q5VYS8 1495 aaKnown RBP42.46■■■■■ 4.39
GTPBP3-208ENST00000595194 UNC13AQ9UPW8 1703 aa42.41■■■■■ 4.38
GTPBP3-208ENST00000595194 DCAF1Q9Y4B6 1507 aa42.29■■■■■ 4.36
GTPBP3-208ENST00000595194 BICRAQ9NZM4 1560 aa42.16■■■■■ 4.34
GTPBP3-208ENST00000595194 SCRIBQ14160 1630 aa41.73■■■■■ 4.27
GTPBP3-208ENST00000595194 SHROOM4Q9ULL8 1493 aa41.63■■■■■ 4.25
GTPBP3-208ENST00000595194 CC2D2AQ9P2K1 1620 aa41.12■■■■■ 4.17
GTPBP3-208ENST00000595194 EIF4G1Q04637 1599 aaKnown RBP41.12■■■■■ 4.17
GTPBP3-208ENST00000595194 CECR2Q9BXF3 1484 aa41■■■■■ 4.15
GTPBP3-208ENST00000595194 NCAPD3P42695 1498 aa39.93■■■■□ 3.98
GTPBP3-208ENST00000595194 SMARCA4P51532 1647 aa39.84■■■■□ 3.97
GTPBP3-208ENST00000595194 ATAD2BQ9ULI0 1458 aa39.84■■■■□ 3.97
GTPBP3-208ENST00000595194 SMARCA2P51531 1590 aa39.73■■■■□ 3.95
GTPBP3-208ENST00000595194 BAZ1AQ9NRL2 1556 aaPredicted RBP39.7■■■■□ 3.95
GTPBP3-208ENST00000595194 HMGXB3Q12766 1538 aa39.62■■■■□ 3.93
GTPBP3-208ENST00000595194 BAZ1BQ9UIG0 1483 aaKnown RBP39.47■■■■□ 3.91
GTPBP3-208ENST00000595194 PEG3Q9GZU2 1588 aa39.46■■■■□ 3.91
GTPBP3-208ENST00000595194 MROH2BQ7Z745 1585 aa39.43■■■■□ 3.9
GTPBP3-208ENST00000595194 ERCC6Q03468 1493 aa39.3■■■■□ 3.88
GTPBP3-208ENST00000595194 NESP48681 1621 aa39.19■■■■□ 3.86
GTPBP3-208ENST00000595194 CUX2O14529 1486 aa39.12■■■■□ 3.85
GTPBP3-208ENST00000595194 LAMC3Q9Y6N6 1575 aa38.95■■■■□ 3.83
GTPBP3-208ENST00000595194 WIZO95785 1651 aa38.95■■■■□ 3.83
GTPBP3-208ENST00000595194 DNAJC5Q9H3Z4 198 aa38.82■■■■□ 3.8
GTPBP3-208ENST00000595194 PDS5BQ9NTI5 1447 aa38.76■■■■□ 3.8
GTPBP3-208ENST00000595194 RSF1Q96T23 1441 aaPredicted RBP38.74■■■■□ 3.79
GTPBP3-208ENST00000595194 CADPSQ9ULU8 1353 aa38.74■■■■□ 3.79
GTPBP3-208ENST00000595194 THOC2Q8NI27 1593 aaKnown RBP38.7■■■■□ 3.79
GTPBP3-208ENST00000595194 KIF21AQ7Z4S6 1674 aa38.65■■■■□ 3.78
GTPBP3-208ENST00000595194 TOP2AP11388 1531 aaKnown RBP38.49■■■■□ 3.75
GTPBP3-208ENST00000595194 MRC2Q9UBG0 1479 aa38.38■■■■□ 3.73
GTPBP3-208ENST00000595194 CFTRP13569 1480 aa38.35■■■■□ 3.73
GTPBP3-208ENST00000595194 CEP164Q9UPV0 1460 aa38.28■■■■□ 3.72
GTPBP3-208ENST00000595194 FANCD2Q9BXW9 1451 aa38.28■■■■□ 3.72
GTPBP3-208ENST00000595194 WDR62O43379 1518 aa38.26■■■■□ 3.72
GTPBP3-208ENST00000595194 CCDC88BA6NC98 1476 aa38.09■■■■□ 3.69
GTPBP3-208ENST00000595194 URB2Q14146 1524 aaKnown RBP37.93■■■■□ 3.66
GTPBP3-208ENST00000595194 PRDM2Q13029 1718 aa37.9■■■■□ 3.66
GTPBP3-208ENST00000595194 TOPBP1Q92547 1522 aa37.58■■■■□ 3.61
GTPBP3-208ENST00000595194 ABCC8Q09428 1581 aa37.54■■■■□ 3.6
GTPBP3-208ENST00000595194 IFT140Q96RY7 1462 aa37.52■■■■□ 3.6
GTPBP3-208ENST00000595194 DNMBPQ6XZF7 1577 aa37.46■■■■□ 3.59
GTPBP3-208ENST00000595194 OSCARQ8IYS5 282 aa37.45■■■■□ 3.59
GTPBP3-208ENST00000595194 ZNF608Q9ULD9 1512 aaPredicted RBP37.43■■■■□ 3.58
GTPBP3-208ENST00000595194 SUPT5HO00267 1087 aaKnown RBP37.29■■■■□ 3.56
GTPBP3-208ENST00000595194 TRIM41Q8WV44 630 aa37.24■■■■□ 3.55
GTPBP3-208ENST00000595194 POLA1P09884 1462 aaPredicted RBP37.22■■■■□ 3.55
GTPBP3-208ENST00000595194 TARBP1Q13395 1621 aaKnown RBP37.21■■■■□ 3.55
GTPBP3-208ENST00000595194 EIF4G3O43432 1585 aaKnown RBP37.2■■■■□ 3.55
GTPBP3-208ENST00000595194 AQRO60306 1485 aaKnown RBP eCLIP37.15■■■■□ 3.54
GTPBP3-208ENST00000595194 RAD54L2Q9Y4B4 1467 aa37.09■■■■□ 3.53
GTPBP3-208ENST00000595194 SOGA1O94964 1423 aa37.09■■■■□ 3.53
GTPBP3-208ENST00000595194 CUX1P39880 1505 aa37.03■■■■□ 3.52
GTPBP3-208ENST00000595194 FGD5Q6ZNL6 1462 aa37.02■■■■□ 3.52
GTPBP3-208ENST00000595194 TDRD9Q8NDG6 1382 aaKnown RBP36.98■■■■□ 3.51
GTPBP3-208ENST00000595194 FBLN2P98095 1184 aa36.88■■■■□ 3.49
GTPBP3-208ENST00000595194 CHD1O14646 1710 aa36.85■■■■□ 3.49
GTPBP3-208ENST00000595194 WDR97A6NE52 1622 aa36.85■■■■□ 3.49
GTPBP3-208ENST00000595194 RIMBP3CA6NJZ7 1639 aa36.84■■■■□ 3.49
GTPBP3-208ENST00000595194 RIMBP3BA6NNM3 1639 aa36.84■■■■□ 3.49
GTPBP3-208ENST00000595194 RIMBP3Q9UFD9 1639 aa36.84■■■■□ 3.49
GTPBP3-208ENST00000595194 ARHGEF11O15085 1522 aa36.78■■■■□ 3.48
GTPBP3-208ENST00000595194 SNAPC4Q5SXM2 1469 aa36.75■■■■□ 3.47
GTPBP3-208ENST00000595194 GRIN2BQ13224 1484 aa36.71■■■■□ 3.47
GTPBP3-208ENST00000595194 MAGI1Q96QZ7 1491 aaPredicted RBP36.68■■■■□ 3.46
GTPBP3-208ENST00000595194 CHMP7Q8WUX9 453 aaPredicted RBP36.66■■■■□ 3.46
GTPBP3-208ENST00000595194 ABCA10Q8WWZ4 1543 aa36.63■■■■□ 3.45
GTPBP3-208ENST00000595194 GAPVD1Q14C86 1478 aa36.62■■■■□ 3.45
GTPBP3-208ENST00000595194 CYB5RLQ6IPT4 315 aa36.56■■■■□ 3.44
GTPBP3-208ENST00000595194 WRNQ14191 1432 aaPredicted RBP eCLIP36.56■■■■□ 3.44
GTPBP3-208ENST00000595194 SYNJ2O15056 1496 aa36.56■■■■□ 3.44
GTPBP3-208ENST00000595194 PBRM1Q86U86 1689 aa36.52■■■■□ 3.44
GTPBP3-208ENST00000595194 TOP2BQ02880 1626 aa36.51■■■■□ 3.43
GTPBP3-208ENST00000595194 ABCA5Q8WWZ7 1642 aa36.51■■■■□ 3.43
GTPBP3-208ENST00000595194 SYNJ1O43426 1573 aa36.49■■■■□ 3.43
GTPBP3-208ENST00000595194 BIVM-ERCC5R4GMW8 1640 aa36.48■■■■□ 3.43
GTPBP3-208ENST00000595194 CLASP1Q7Z460 1538 aa36.46■■■■□ 3.43
GTPBP3-208ENST00000595194 ARAP1Q96P48 1450 aa36.43■■■■□ 3.42
GTPBP3-208ENST00000595194 GRIN2AQ12879 1464 aa36.23■■■■□ 3.39
GTPBP3-208ENST00000595194 ADAMTS12P58397 1594 aa36.21■■■■□ 3.39
GTPBP3-208ENST00000595194 FHAD1B1AJZ9 1412 aa36.17■■■■□ 3.38
GTPBP3-208ENST00000595194 ERICH3Q5RHP9 1530 aa36.16■■■■□ 3.38
GTPBP3-208ENST00000595194 NUP160Q12769 1436 aa36.1■■■■□ 3.37
GTPBP3-208ENST00000595194 CEP170Q5SW79 1584 aa36.06■■■■□ 3.36
GTPBP3-208ENST00000595194 TRHP20396 242 aaPredicted RBP36.06■■■■□ 3.36
GTPBP3-208ENST00000595194 ERCC6L2Q5T890 1561 aa35.93■■■■□ 3.34
GTPBP3-208ENST00000595194 SHROOM2Q13796 1616 aa35.87■■■■□ 3.33
GTPBP3-208ENST00000595194 KIF27Q86VH2 1401 aa35.84■■■■□ 3.33
GTPBP3-208ENST00000595194 IGF1RP08069 1367 aa35.81■■■■□ 3.32
GTPBP3-208ENST00000595194 JPH4Q96JJ6 628 aa35.78■■■■□ 3.32
GTPBP3-208ENST00000595194 PRG4Q92954 1404 aaPredicted RBP35.75■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms