RNA–Protein interactions for RNA: ENST00000595177.1

CAPN12-205, Transcript of calpain 12, humanhuman

TSL 4

Gene CAPN12, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-205ENST00000595177 NISCHQ9Y2I1 1504 aa38.91■■■■□ 3.82
CAPN12-205ENST00000595177 CCDC180Q9P1Z9 1646 aa34.61■■■■□ 3.13
CAPN12-205ENST00000595177 ABCC9O60706 1549 aa33.73■■■□□ 2.99
CAPN12-205ENST00000595177 RB1CC1Q8TDY2 1594 aa32.49■■■□□ 2.79
CAPN12-205ENST00000595177 NACADO15069 1562 aa32.48■■■□□ 2.79
CAPN12-205ENST00000595177 ZCCHC6Q5VYS8 1495 aaKnown RBP32.46■■■□□ 2.79
CAPN12-205ENST00000595177 MYO15BQ96JP2 1530 aa32.37■■■□□ 2.77
CAPN12-205ENST00000595177 DCAF1Q9Y4B6 1507 aa32.24■■■□□ 2.75
CAPN12-205ENST00000595177 DCAF8L2P0C7V8 631 aa32.2■■■□□ 2.75
CAPN12-205ENST00000595177 UNC13AQ9UPW8 1703 aa31.86■■■□□ 2.69
CAPN12-205ENST00000595177 BICRAQ9NZM4 1560 aa31.62■■■□□ 2.65
CAPN12-205ENST00000595177 SCRIBQ14160 1630 aa31.53■■■□□ 2.64
CAPN12-205ENST00000595177 PABPN1Q86U42 306 aaKnown RBP eCLIP31.46■■■□□ 2.633e-7■■■■□ 23.9
CAPN12-205ENST00000595177 SHROOM4Q9ULL8 1493 aa31.25■■■□□ 2.59
CAPN12-205ENST00000595177 DNAJC5BQ9UF47 199 aa30.96■■■□□ 2.55
CAPN12-205ENST00000595177 EIF4G1Q04637 1599 aaKnown RBP30.71■■■□□ 2.51
CAPN12-205ENST00000595177 CC2D2AQ9P2K1 1620 aa30.57■■■□□ 2.48
CAPN12-205ENST00000595177 CECR2Q9BXF3 1484 aa30.31■■■□□ 2.44
CAPN12-205ENST00000595177 SMARCA4P51532 1647 aa30.2■■■□□ 2.43
CAPN12-205ENST00000595177 BAZ1AQ9NRL2 1556 aaPredicted RBP30.13■■■□□ 2.41
CAPN12-205ENST00000595177 ATAD2BQ9ULI0 1458 aa30■■■□□ 2.39
CAPN12-205ENST00000595177 MROH2BQ7Z745 1585 aa29.99■■■□□ 2.39
CAPN12-205ENST00000595177 NCAPD3P42695 1498 aa29.98■■■□□ 2.39
CAPN12-205ENST00000595177 PEG3Q9GZU2 1588 aa29.96■■■□□ 2.39
CAPN12-205ENST00000595177 SMARCA2P51531 1590 aa29.94■■■□□ 2.38
CAPN12-205ENST00000595177 HMGXB3Q12766 1538 aa29.87■■■□□ 2.37
CAPN12-205ENST00000595177 BAZ1BQ9UIG0 1483 aaKnown RBP29.71■■■□□ 2.35
CAPN12-205ENST00000595177 WIZO95785 1651 aa29.66■■■□□ 2.34
CAPN12-205ENST00000595177 RSF1Q96T23 1441 aaPredicted RBP29.65■■■□□ 2.34
CAPN12-205ENST00000595177 TOP2AP11388 1531 aaKnown RBP29.35■■■□□ 2.29
CAPN12-205ENST00000595177 NESP48681 1621 aa29.25■■■□□ 2.27
CAPN12-205ENST00000595177 LAMC3Q9Y6N6 1575 aa29.18■■■□□ 2.26
CAPN12-205ENST00000595177 CADPSQ9ULU8 1353 aa29.06■■■□□ 2.24
CAPN12-205ENST00000595177 ERCC6Q03468 1493 aa29■■■□□ 2.23
CAPN12-205ENST00000595177 CCDC88BA6NC98 1476 aa28.98■■■□□ 2.23
CAPN12-205ENST00000595177 CFTRP13569 1480 aa28.96■■■□□ 2.23
CAPN12-205ENST00000595177 KIF21AQ7Z4S6 1674 aa28.93■■■□□ 2.22
CAPN12-205ENST00000595177 PDS5BQ9NTI5 1447 aa28.9■■■□□ 2.22
CAPN12-205ENST00000595177 THOC2Q8NI27 1593 aaKnown RBP28.87■■■□□ 2.21
CAPN12-205ENST00000595177 CUX2O14529 1486 aa28.78■■■□□ 2.2
CAPN12-205ENST00000595177 PRDM2Q13029 1718 aa28.77■■■□□ 2.2
CAPN12-205ENST00000595177 FANCD2Q9BXW9 1451 aa28.74■■■□□ 2.19
CAPN12-205ENST00000595177 SUPT5HO00267 1087 aaKnown RBP28.72■■■□□ 2.19
CAPN12-205ENST00000595177 CEP164Q9UPV0 1460 aa28.69■■■□□ 2.18
CAPN12-205ENST00000595177 MRC2Q9UBG0 1479 aa28.66■■■□□ 2.18
CAPN12-205ENST00000595177 WDR62O43379 1518 aa28.63■■■□□ 2.17
CAPN12-205ENST00000595177 URB2Q14146 1524 aaKnown RBP28.51■■■□□ 2.15
CAPN12-205ENST00000595177 TOPBP1Q92547 1522 aa28.31■■■□□ 2.12
CAPN12-205ENST00000595177 DNMBPQ6XZF7 1577 aa28.29■■■□□ 2.12
CAPN12-205ENST00000595177 ABCC8Q09428 1581 aa28.24■■■□□ 2.11
CAPN12-205ENST00000595177 CUX1P39880 1505 aa28.15■■■□□ 2.1
CAPN12-205ENST00000595177 POLA1P09884 1462 aaPredicted RBP28.08■■■□□ 2.09
CAPN12-205ENST00000595177 IFT140Q96RY7 1462 aa28.08■■■□□ 2.09
CAPN12-205ENST00000595177 TARBP1Q13395 1621 aaKnown RBP28.06■■■□□ 2.08
CAPN12-205ENST00000595177 ZNF608Q9ULD9 1512 aaPredicted RBP28.01■■■□□ 2.07
CAPN12-205ENST00000595177 FGD5Q6ZNL6 1462 aa28■■■□□ 2.07
CAPN12-205ENST00000595177 RAD54L2Q9Y4B4 1467 aa27.93■■■□□ 2.06
CAPN12-205ENST00000595177 SYNJ1O43426 1573 aa27.92■■■□□ 2.06
CAPN12-205ENST00000595177 EIF4G3O43432 1585 aaKnown RBP27.92■■■□□ 2.06
CAPN12-205ENST00000595177 BIVM-ERCC5R4GMW8 1640 aa27.92■■■□□ 2.06
CAPN12-205ENST00000595177 TOP2BQ02880 1626 aa27.91■■■□□ 2.06
CAPN12-205ENST00000595177 WRNQ14191 1432 aaPredicted RBP eCLIP27.9■■■□□ 2.06
CAPN12-205ENST00000595177 SOGA1O94964 1423 aa27.88■■■□□ 2.05
CAPN12-205ENST00000595177 WDR97A6NE52 1622 aa27.87■■■□□ 2.05
CAPN12-205ENST00000595177 AQRO60306 1485 aaKnown RBP eCLIP27.81■■■□□ 2.047e-8■□□□□ 9.3
CAPN12-205ENST00000595177 DNAJC5Q9H3Z4 198 aa27.79■■■□□ 2.04
CAPN12-205ENST00000595177 ABCA10Q8WWZ4 1543 aa27.76■■■□□ 2.03
CAPN12-205ENST00000595177 TDRD9Q8NDG6 1382 aaKnown RBP27.73■■■□□ 2.03
CAPN12-205ENST00000595177 ABCA5Q8WWZ7 1642 aa27.69■■■□□ 2.02
CAPN12-205ENST00000595177 GAPVD1Q14C86 1478 aa27.6■■■□□ 2.01
CAPN12-205ENST00000595177 PBRM1Q86U86 1689 aa27.59■■■□□ 2.01
CAPN12-205ENST00000595177 GRIN2BQ13224 1484 aa27.59■■■□□ 2.01
CAPN12-205ENST00000595177 SNAPC4Q5SXM2 1469 aa27.57■■■□□ 2
CAPN12-205ENST00000595177 CHD1O14646 1710 aa27.54■■■□□ 2
CAPN12-205ENST00000595177 MAGI1Q96QZ7 1491 aaPredicted RBP27.54■■■□□ 2
CAPN12-205ENST00000595177 OSCARQ8IYS5 282 aa27.46■■□□□ 1.99
CAPN12-205ENST00000595177 SYNJ2O15056 1496 aa27.43■■□□□ 1.98
CAPN12-205ENST00000595177 ERICH3Q5RHP9 1530 aa27.41■■□□□ 1.98
CAPN12-205ENST00000595177 ADAMTS12P58397 1594 aa27.4■■□□□ 1.98
CAPN12-205ENST00000595177 FBLN2P98095 1184 aa27.3■■□□□ 1.96
CAPN12-205ENST00000595177 CLASP1Q7Z460 1538 aa27.29■■□□□ 1.96
CAPN12-205ENST00000595177 FHAD1B1AJZ9 1412 aa27.28■■□□□ 1.96
CAPN12-205ENST00000595177 KIF27Q86VH2 1401 aa27.28■■□□□ 1.96
CAPN12-205ENST00000595177 CHMP7Q8WUX9 453 aaPredicted RBP27.27■■□□□ 1.96
CAPN12-205ENST00000595177 GRIN2AQ12879 1464 aa27.26■■□□□ 1.95
CAPN12-205ENST00000595177 IGF1RP08069 1367 aa27.22■■□□□ 1.95
CAPN12-205ENST00000595177 NUP160Q12769 1436 aa27.18■■□□□ 1.94
CAPN12-205ENST00000595177 CEP170Q5SW79 1584 aa27.17■■□□□ 1.94
CAPN12-205ENST00000595177 CUL7Q14999 1698 aa27.17■■□□□ 1.94
CAPN12-205ENST00000595177 ARHGEF11O15085 1522 aa27.16■■□□□ 1.94
CAPN12-205ENST00000595177 RIMBP3CA6NJZ7 1639 aa27.16■■□□□ 1.94
CAPN12-205ENST00000595177 RIMBP3BA6NNM3 1639 aa27.16■■□□□ 1.94
CAPN12-205ENST00000595177 RIMBP3Q9UFD9 1639 aa27.16■■□□□ 1.94
CAPN12-205ENST00000595177 RUSC2Q8N2Y8 1516 aa27.12■■□□□ 1.93
CAPN12-205ENST00000595177 TRIM41Q8WV44 630 aa27.12■■□□□ 1.93
CAPN12-205ENST00000595177 SHROOM2Q13796 1616 aa27.01■■□□□ 1.91
CAPN12-205ENST00000595177 CARMIL1Q5VZK9 1371 aa27■■□□□ 1.91
CAPN12-205ENST00000595177 ARAP1Q96P48 1450 aa26.97■■□□□ 1.91
CAPN12-205ENST00000595177 CHIC1Q5VXU3 224 aa26.91■■□□□ 1.9
CAPN12-205ENST00000595177 ERCC6L2Q5T890 1561 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms