RNA–Protein interactions for RNA: ENST00000594925.1

GDF15-202, Transcript of growth differentiation factor 15, humanhuman

TSL 3

Gene GDF15, Length 294 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF15-202ENST00000594925 NISCHQ9Y2I1 1504 aa37.75■■■■□ 3.63
GDF15-202ENST00000594925 CCDC180Q9P1Z9 1646 aa33.64■■■□□ 2.98
GDF15-202ENST00000594925 ABCC9O60706 1549 aa33.09■■■□□ 2.89
GDF15-202ENST00000594925 RB1CC1Q8TDY2 1594 aa31.74■■■□□ 2.67
GDF15-202ENST00000594925 NACADO15069 1562 aa31.65■■■□□ 2.66
GDF15-202ENST00000594925 DCAF8L2P0C7V8 631 aa31.6■■■□□ 2.65
GDF15-202ENST00000594925 ZCCHC6Q5VYS8 1495 aaKnown RBP31.42■■■□□ 2.62
GDF15-202ENST00000594925 MYO15BQ96JP2 1530 aa31.39■■■□□ 2.62
GDF15-202ENST00000594925 DCAF1Q9Y4B6 1507 aa31.21■■■□□ 2.59
GDF15-202ENST00000594925 UNC13AQ9UPW8 1703 aa31.03■■■□□ 2.56
GDF15-202ENST00000594925 PABPN1Q86U42 306 aaKnown RBP eCLIP30.88■■■□□ 2.53
GDF15-202ENST00000594925 BICRAQ9NZM4 1560 aa30.8■■■□□ 2.52
GDF15-202ENST00000594925 SCRIBQ14160 1630 aa30.71■■■□□ 2.51
GDF15-202ENST00000594925 DNAJC5BQ9UF47 199 aa30.5■■■□□ 2.47
GDF15-202ENST00000594925 SHROOM4Q9ULL8 1493 aa30.43■■■□□ 2.46
GDF15-202ENST00000594925 EIF4G1Q04637 1599 aaKnown RBP30■■■□□ 2.39
GDF15-202ENST00000594925 CC2D2AQ9P2K1 1620 aa29.92■■■□□ 2.38
GDF15-202ENST00000594925 CECR2Q9BXF3 1484 aa29.74■■■□□ 2.35
GDF15-202ENST00000594925 SMARCA4P51532 1647 aa29.34■■■□□ 2.29
GDF15-202ENST00000594925 BAZ1AQ9NRL2 1556 aaPredicted RBP29.26■■■□□ 2.28
GDF15-202ENST00000594925 ATAD2BQ9ULI0 1458 aa29.21■■■□□ 2.27
GDF15-202ENST00000594925 NCAPD3P42695 1498 aa29.2■■■□□ 2.26
GDF15-202ENST00000594925 SMARCA2P51531 1590 aa29.16■■■□□ 2.26
GDF15-202ENST00000594925 MROH2BQ7Z745 1585 aa29.1■■■□□ 2.25
GDF15-202ENST00000594925 HMGXB3Q12766 1538 aa29.06■■■□□ 2.24
GDF15-202ENST00000594925 PEG3Q9GZU2 1588 aa29.04■■■□□ 2.24
GDF15-202ENST00000594925 BAZ1BQ9UIG0 1483 aaKnown RBP28.97■■■□□ 2.23
GDF15-202ENST00000594925 WIZO95785 1651 aa28.78■■■□□ 2.2
GDF15-202ENST00000594925 RSF1Q96T23 1441 aaPredicted RBP28.69■■■□□ 2.18
GDF15-202ENST00000594925 NESP48681 1621 aa28.59■■■□□ 2.17
GDF15-202ENST00000594925 ERCC6Q03468 1493 aa28.53■■■□□ 2.16
GDF15-202ENST00000594925 LAMC3Q9Y6N6 1575 aa28.47■■■□□ 2.15
GDF15-202ENST00000594925 TOP2AP11388 1531 aaKnown RBP28.46■■■□□ 2.15
GDF15-202ENST00000594925 CADPSQ9ULU8 1353 aa28.34■■■□□ 2.13
GDF15-202ENST00000594925 PDS5BQ9NTI5 1447 aa28.27■■■□□ 2.12
GDF15-202ENST00000594925 CUX2O14529 1486 aa28.27■■■□□ 2.12
GDF15-202ENST00000594925 KIF21AQ7Z4S6 1674 aa28.25■■■□□ 2.11
GDF15-202ENST00000594925 THOC2Q8NI27 1593 aaKnown RBP28.2■■■□□ 2.1
GDF15-202ENST00000594925 CFTRP13569 1480 aa28.15■■■□□ 2.1
GDF15-202ENST00000594925 CCDC88BA6NC98 1476 aa28.12■■■□□ 2.09
GDF15-202ENST00000594925 FANCD2Q9BXW9 1451 aa28.04■■■□□ 2.08
GDF15-202ENST00000594925 MRC2Q9UBG0 1479 aa28.02■■■□□ 2.08
GDF15-202ENST00000594925 CEP164Q9UPV0 1460 aa28.02■■■□□ 2.08
GDF15-202ENST00000594925 WDR62O43379 1518 aa27.93■■■□□ 2.06
GDF15-202ENST00000594925 PRDM2Q13029 1718 aa27.92■■■□□ 2.06
GDF15-202ENST00000594925 SUPT5HO00267 1087 aaKnown RBP27.84■■■□□ 2.05
GDF15-202ENST00000594925 URB2Q14146 1524 aaKnown RBP27.78■■■□□ 2.04
GDF15-202ENST00000594925 TOPBP1Q92547 1522 aa27.57■■■□□ 2
GDF15-202ENST00000594925 DNAJC5Q9H3Z4 198 aa27.57■■■□□ 2
GDF15-202ENST00000594925 ABCC8Q09428 1581 aa27.53■■■□□ 2
GDF15-202ENST00000594925 DNMBPQ6XZF7 1577 aa27.53■■■□□ 2
GDF15-202ENST00000594925 IFT140Q96RY7 1462 aa27.44■■□□□ 1.98
GDF15-202ENST00000594925 ZNF608Q9ULD9 1512 aaPredicted RBP27.34■■□□□ 1.97
GDF15-202ENST00000594925 POLA1P09884 1462 aaPredicted RBP27.33■■□□□ 1.97
GDF15-202ENST00000594925 CUX1P39880 1505 aa27.31■■□□□ 1.96
GDF15-202ENST00000594925 TARBP1Q13395 1621 aaKnown RBP27.3■■□□□ 1.96
GDF15-202ENST00000594925 FGD5Q6ZNL6 1462 aa27.25■■□□□ 1.95
GDF15-202ENST00000594925 EIF4G3O43432 1585 aaKnown RBP27.24■■□□□ 1.95
GDF15-202ENST00000594925 RAD54L2Q9Y4B4 1467 aa27.22■■□□□ 1.95
GDF15-202ENST00000594925 SOGA1O94964 1423 aa27.2■■□□□ 1.94
GDF15-202ENST00000594925 AQRO60306 1485 aaKnown RBP eCLIP27.16■■□□□ 1.944e-28■■■■■ 43.9
GDF15-202ENST00000594925 TDRD9Q8NDG6 1382 aaKnown RBP27.08■■□□□ 1.93
GDF15-202ENST00000594925 WRNQ14191 1432 aaPredicted RBP eCLIP27.07■■□□□ 1.92
GDF15-202ENST00000594925 OSCARQ8IYS5 282 aa27.05■■□□□ 1.92
GDF15-202ENST00000594925 WDR97A6NE52 1622 aa27.05■■□□□ 1.92
GDF15-202ENST00000594925 SYNJ1O43426 1573 aa27.04■■□□□ 1.92
GDF15-202ENST00000594925 TOP2BQ02880 1626 aa27.03■■□□□ 1.92
GDF15-202ENST00000594925 BIVM-ERCC5R4GMW8 1640 aa27.03■■□□□ 1.92
GDF15-202ENST00000594925 ABCA10Q8WWZ4 1543 aa26.95■■□□□ 1.91
GDF15-202ENST00000594925 CHD1O14646 1710 aa26.92■■□□□ 1.9
GDF15-202ENST00000594925 GRIN2BQ13224 1484 aa26.91■■□□□ 1.9
GDF15-202ENST00000594925 SNAPC4Q5SXM2 1469 aa26.91■■□□□ 1.9
GDF15-202ENST00000594925 GAPVD1Q14C86 1478 aa26.89■■□□□ 1.9
GDF15-202ENST00000594925 ABCA5Q8WWZ7 1642 aa26.89■■□□□ 1.9
GDF15-202ENST00000594925 PBRM1Q86U86 1689 aa26.86■■□□□ 1.89
GDF15-202ENST00000594925 MAGI1Q96QZ7 1491 aaPredicted RBP26.86■■□□□ 1.89
GDF15-202ENST00000594925 FBLN2P98095 1184 aa26.85■■□□□ 1.89
GDF15-202ENST00000594925 SYNJ2O15056 1496 aa26.75■■□□□ 1.87
GDF15-202ENST00000594925 CHMP7Q8WUX9 453 aaPredicted RBP26.74■■□□□ 1.87
GDF15-202ENST00000594925 RIMBP3CA6NJZ7 1639 aa26.68■■□□□ 1.86
GDF15-202ENST00000594925 RIMBP3BA6NNM3 1639 aa26.68■■□□□ 1.86
GDF15-202ENST00000594925 RIMBP3Q9UFD9 1639 aa26.68■■□□□ 1.86
GDF15-202ENST00000594925 ARHGEF11O15085 1522 aa26.65■■□□□ 1.86
GDF15-202ENST00000594925 ADAMTS12P58397 1594 aa26.64■■□□□ 1.86
GDF15-202ENST00000594925 TRIM41Q8WV44 630 aa26.64■■□□□ 1.86
GDF15-202ENST00000594925 ERICH3Q5RHP9 1530 aa26.63■■□□□ 1.85
GDF15-202ENST00000594925 CLASP1Q7Z460 1538 aa26.62■■□□□ 1.85
GDF15-202ENST00000594925 GRIN2AQ12879 1464 aa26.57■■□□□ 1.84
GDF15-202ENST00000594925 FHAD1B1AJZ9 1412 aa26.56■■□□□ 1.84
GDF15-202ENST00000594925 KIF27Q86VH2 1401 aa26.5■■□□□ 1.83
GDF15-202ENST00000594925 CEP170Q5SW79 1584 aa26.46■■□□□ 1.83
GDF15-202ENST00000594925 NUP160Q12769 1436 aa26.45■■□□□ 1.82
GDF15-202ENST00000594925 ARAP1Q96P48 1450 aa26.42■■□□□ 1.82
GDF15-202ENST00000594925 IGF1RP08069 1367 aa26.41■■□□□ 1.82
GDF15-202ENST00000594925 CYB5RLQ6IPT4 315 aa26.39■■□□□ 1.82
GDF15-202ENST00000594925 CUL7Q14999 1698 aa26.37■■□□□ 1.81
GDF15-202ENST00000594925 SHROOM2Q13796 1616 aa26.28■■□□□ 1.8
GDF15-202ENST00000594925 ERCC6L2Q5T890 1561 aa26.26■■□□□ 1.79
GDF15-202ENST00000594925 RUSC2Q8N2Y8 1516 aa26.26■■□□□ 1.79
GDF15-202ENST00000594925 CARMIL1Q5VZK9 1371 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms