RNA–Protein interactions for RNA: ENST00000594847.6

STRN4-210, Transcript of striatin 4, humanhuman

TSL 3

Gene STRN4, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-210ENST00000594847 NISCHQ9Y2I1 1504 aa36.81■■■■□ 3.48
STRN4-210ENST00000594847 CCDC180Q9P1Z9 1646 aa32.64■■■□□ 2.82
STRN4-210ENST00000594847 ABCC9O60706 1549 aa31.75■■■□□ 2.67
STRN4-210ENST00000594847 ZCCHC6Q5VYS8 1495 aaKnown RBP30.7■■■□□ 2.51
STRN4-210ENST00000594847 NACADO15069 1562 aa30.66■■■□□ 2.5
STRN4-210ENST00000594847 RB1CC1Q8TDY2 1594 aa30.62■■■□□ 2.49
STRN4-210ENST00000594847 MYO15BQ96JP2 1530 aa30.58■■■□□ 2.49
STRN4-210ENST00000594847 DCAF8L2P0C7V8 631 aa30.52■■■□□ 2.48
STRN4-210ENST00000594847 DCAF1Q9Y4B6 1507 aa30.5■■■□□ 2.47
STRN4-210ENST00000594847 UNC13AQ9UPW8 1703 aa29.97■■■□□ 2.39
STRN4-210ENST00000594847 BICRAQ9NZM4 1560 aa29.78■■■□□ 2.36
STRN4-210ENST00000594847 SCRIBQ14160 1630 aa29.74■■■□□ 2.35
STRN4-210ENST00000594847 PABPN1Q86U42 306 aaKnown RBP eCLIP29.7■■■□□ 2.35
STRN4-210ENST00000594847 SHROOM4Q9ULL8 1493 aa29.44■■■□□ 2.3
STRN4-210ENST00000594847 DNAJC5BQ9UF47 199 aa29.12■■■□□ 2.25
STRN4-210ENST00000594847 EIF4G1Q04637 1599 aaKnown RBP28.92■■■□□ 2.22
STRN4-210ENST00000594847 CC2D2AQ9P2K1 1620 aa28.76■■■□□ 2.19
STRN4-210ENST00000594847 CECR2Q9BXF3 1484 aa28.67■■■□□ 2.18
STRN4-210ENST00000594847 SMARCA4P51532 1647 aa28.51■■■□□ 2.15
STRN4-210ENST00000594847 BAZ1AQ9NRL2 1556 aaPredicted RBP28.48■■■□□ 2.15
STRN4-210ENST00000594847 MROH2BQ7Z745 1585 aa28.37■■■□□ 2.13
STRN4-210ENST00000594847 ATAD2BQ9ULI0 1458 aa28.34■■■□□ 2.13
STRN4-210ENST00000594847 NCAPD3P42695 1498 aa28.33■■■□□ 2.13
STRN4-210ENST00000594847 PEG3Q9GZU2 1588 aa28.29■■■□□ 2.12
STRN4-210ENST00000594847 SMARCA2P51531 1590 aa28.27■■■□□ 2.12
STRN4-210ENST00000594847 HMGXB3Q12766 1538 aa28.17■■■□□ 2.1
STRN4-210ENST00000594847 RSF1Q96T23 1441 aaPredicted RBP28.11■■■□□ 2.09
STRN4-210ENST00000594847 WIZO95785 1651 aa28.05■■■□□ 2.08
STRN4-210ENST00000594847 BAZ1BQ9UIG0 1483 aaKnown RBP28.05■■■□□ 2.08
STRN4-210ENST00000594847 TOP2AP11388 1531 aaKnown RBP27.76■■■□□ 2.03
STRN4-210ENST00000594847 NESP48681 1621 aa27.56■■■□□ 2
STRN4-210ENST00000594847 LAMC3Q9Y6N6 1575 aa27.5■■□□□ 1.99
STRN4-210ENST00000594847 CADPSQ9ULU8 1353 aa27.47■■□□□ 1.99
STRN4-210ENST00000594847 CCDC88BA6NC98 1476 aa27.45■■□□□ 1.99
STRN4-210ENST00000594847 SUPT5HO00267 1087 aaKnown RBP27.37■■□□□ 1.97
STRN4-210ENST00000594847 CFTRP13569 1480 aa27.37■■□□□ 1.97
STRN4-210ENST00000594847 ERCC6Q03468 1493 aa27.3■■□□□ 1.96
STRN4-210ENST00000594847 PDS5BQ9NTI5 1447 aa27.28■■□□□ 1.96
STRN4-210ENST00000594847 KIF21AQ7Z4S6 1674 aa27.21■■□□□ 1.95
STRN4-210ENST00000594847 FANCD2Q9BXW9 1451 aa27.13■■□□□ 1.93
STRN4-210ENST00000594847 THOC2Q8NI27 1593 aaKnown RBP27.13■■□□□ 1.93
STRN4-210ENST00000594847 PRDM2Q13029 1718 aa27.12■■□□□ 1.93
STRN4-210ENST00000594847 CEP164Q9UPV0 1460 aa27.06■■□□□ 1.92
STRN4-210ENST00000594847 CUX2O14529 1486 aa27.04■■□□□ 1.92
STRN4-210ENST00000594847 MRC2Q9UBG0 1479 aa27.01■■□□□ 1.91
STRN4-210ENST00000594847 WDR62O43379 1518 aa26.95■■□□□ 1.9
STRN4-210ENST00000594847 URB2Q14146 1524 aaKnown RBP26.9■■□□□ 1.9
STRN4-210ENST00000594847 TOPBP1Q92547 1522 aa26.74■■□□□ 1.87
STRN4-210ENST00000594847 ABCC8Q09428 1581 aa26.71■■□□□ 1.87
STRN4-210ENST00000594847 DNMBPQ6XZF7 1577 aa26.71■■□□□ 1.87
STRN4-210ENST00000594847 CUX1P39880 1505 aa26.61■■□□□ 1.85
STRN4-210ENST00000594847 POLA1P09884 1462 aaPredicted RBP26.52■■□□□ 1.84
STRN4-210ENST00000594847 IFT140Q96RY7 1462 aa26.51■■□□□ 1.83
STRN4-210ENST00000594847 TARBP1Q13395 1621 aaKnown RBP26.47■■□□□ 1.83
STRN4-210ENST00000594847 FGD5Q6ZNL6 1462 aa26.46■■□□□ 1.83
STRN4-210ENST00000594847 WRNQ14191 1432 aaPredicted RBP eCLIP26.45■■□□□ 1.82
STRN4-210ENST00000594847 ZNF608Q9ULD9 1512 aaPredicted RBP26.41■■□□□ 1.82
STRN4-210ENST00000594847 SYNJ1O43426 1573 aa26.41■■□□□ 1.82
STRN4-210ENST00000594847 TOP2BQ02880 1626 aa26.4■■□□□ 1.82
STRN4-210ENST00000594847 BIVM-ERCC5R4GMW8 1640 aa26.4■■□□□ 1.82
STRN4-210ENST00000594847 RAD54L2Q9Y4B4 1467 aa26.39■■□□□ 1.82
STRN4-210ENST00000594847 SOGA1O94964 1423 aa26.39■■□□□ 1.81
STRN4-210ENST00000594847 EIF4G3O43432 1585 aaKnown RBP26.28■■□□□ 1.8
STRN4-210ENST00000594847 WDR97A6NE52 1622 aa26.27■■□□□ 1.8
STRN4-210ENST00000594847 AQRO60306 1485 aaKnown RBP eCLIP26.25■■□□□ 1.795e-7■■■■□ 23.4
STRN4-210ENST00000594847 ABCA10Q8WWZ4 1543 aa26.24■■□□□ 1.79
STRN4-210ENST00000594847 TDRD9Q8NDG6 1382 aaKnown RBP26.22■■□□□ 1.79
STRN4-210ENST00000594847 ABCA5Q8WWZ7 1642 aa26.12■■□□□ 1.77
STRN4-210ENST00000594847 GAPVD1Q14C86 1478 aa26.09■■□□□ 1.77
STRN4-210ENST00000594847 DNAJC5Q9H3Z4 198 aa26.07■■□□□ 1.76
STRN4-210ENST00000594847 GRIN2BQ13224 1484 aa26.06■■□□□ 1.76
STRN4-210ENST00000594847 PBRM1Q86U86 1689 aa26■■□□□ 1.75
STRN4-210ENST00000594847 SNAPC4Q5SXM2 1469 aa26■■□□□ 1.75
STRN4-210ENST00000594847 MAGI1Q96QZ7 1491 aaPredicted RBP25.98■■□□□ 1.75
STRN4-210ENST00000594847 ERICH3Q5RHP9 1530 aa25.92■■□□□ 1.74
STRN4-210ENST00000594847 OSCARQ8IYS5 282 aa25.91■■□□□ 1.74
STRN4-210ENST00000594847 CHD1O14646 1710 aa25.91■■□□□ 1.74
STRN4-210ENST00000594847 SYNJ2O15056 1496 aa25.88■■□□□ 1.73
STRN4-210ENST00000594847 KIF27Q86VH2 1401 aa25.87■■□□□ 1.73
STRN4-210ENST00000594847 TRIM41Q8WV44 630 aa25.85■■□□□ 1.73
STRN4-210ENST00000594847 ADAMTS12P58397 1594 aa25.83■■□□□ 1.73
STRN4-210ENST00000594847 IGF1RP08069 1367 aa25.82■■□□□ 1.72
STRN4-210ENST00000594847 FBLN2P98095 1184 aa25.8■■□□□ 1.72
STRN4-210ENST00000594847 FHAD1B1AJZ9 1412 aa25.8■■□□□ 1.72
STRN4-210ENST00000594847 CHMP7Q8WUX9 453 aaPredicted RBP25.79■■□□□ 1.72
STRN4-210ENST00000594847 RUSC2Q8N2Y8 1516 aa25.74■■□□□ 1.71
STRN4-210ENST00000594847 GRIN2AQ12879 1464 aa25.73■■□□□ 1.71
STRN4-210ENST00000594847 CHIC1Q5VXU3 224 aa25.73■■□□□ 1.71
STRN4-210ENST00000594847 CLASP1Q7Z460 1538 aa25.69■■□□□ 1.7
STRN4-210ENST00000594847 CUL7Q14999 1698 aa25.68■■□□□ 1.7
STRN4-210ENST00000594847 NUP160Q12769 1436 aa25.66■■□□□ 1.7
STRN4-210ENST00000594847 CEP170Q5SW79 1584 aa25.61■■□□□ 1.69
STRN4-210ENST00000594847 CARMIL1Q5VZK9 1371 aa25.61■■□□□ 1.69
STRN4-210ENST00000594847 ARHGEF11O15085 1522 aa25.53■■□□□ 1.68
STRN4-210ENST00000594847 RIMBP3CA6NJZ7 1639 aa25.51■■□□□ 1.67
STRN4-210ENST00000594847 RIMBP3BA6NNM3 1639 aa25.51■■□□□ 1.67
STRN4-210ENST00000594847 RIMBP3Q9UFD9 1639 aa25.51■■□□□ 1.67
STRN4-210ENST00000594847 PRXQ9BXM0 1461 aa25.48■■□□□ 1.67
STRN4-210ENST00000594847 EEA1Q15075 1411 aa25.48■■□□□ 1.67
STRN4-210ENST00000594847 RAPGEF2Q9Y4G8 1499 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms