RNA–Protein interactions for RNA: ENST00000594745.5

KHSRP-203, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 3

Gene KHSRP, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-203ENST00000594745 NISCHQ9Y2I1 1504 aa35.87■■■■□ 3.33
KHSRP-203ENST00000594745 ABCC9O60706 1549 aa32.46■■■□□ 2.79
KHSRP-203ENST00000594745 CCDC180Q9P1Z9 1646 aa32.27■■■□□ 2.76
KHSRP-203ENST00000594745 RB1CC1Q8TDY2 1594 aa30.83■■■□□ 2.53
KHSRP-203ENST00000594745 DCAF8L2P0C7V8 631 aa30.59■■■□□ 2.49
KHSRP-203ENST00000594745 NACADO15069 1562 aa30.53■■■□□ 2.48
KHSRP-203ENST00000594745 DNAJC5BQ9UF47 199 aa30.4■■■□□ 2.46
KHSRP-203ENST00000594745 PABPN1Q86U42 306 aaKnown RBP eCLIP30.21■■■□□ 2.435e-7■□□□□ 8.6
KHSRP-203ENST00000594745 UNC13AQ9UPW8 1703 aa30.08■■■□□ 2.41
KHSRP-203ENST00000594745 MYO15BQ96JP2 1530 aa29.96■■■□□ 2.39
KHSRP-203ENST00000594745 BICRAQ9NZM4 1560 aa29.8■■■□□ 2.36
KHSRP-203ENST00000594745 ZCCHC6Q5VYS8 1495 aaKnown RBP29.69■■■□□ 2.34
KHSRP-203ENST00000594745 DCAF1Q9Y4B6 1507 aa29.55■■■□□ 2.32
KHSRP-203ENST00000594745 SCRIBQ14160 1630 aa29.49■■■□□ 2.31
KHSRP-203ENST00000594745 SHROOM4Q9ULL8 1493 aa29.42■■■□□ 2.3
KHSRP-203ENST00000594745 CC2D2AQ9P2K1 1620 aa29.27■■■□□ 2.28
KHSRP-203ENST00000594745 CECR2Q9BXF3 1484 aa29.23■■■□□ 2.27
KHSRP-203ENST00000594745 EIF4G1Q04637 1599 aaKnown RBP29.17■■■□□ 2.26
KHSRP-203ENST00000594745 NCAPD3P42695 1498 aa28.13■■■□□ 2.09
KHSRP-203ENST00000594745 ERCC6Q03468 1493 aa28.13■■■□□ 2.09
KHSRP-203ENST00000594745 DNAJC5Q9H3Z4 198 aa28.06■■■□□ 2.08
KHSRP-203ENST00000594745 ATAD2BQ9ULI0 1458 aa28.06■■■□□ 2.08
KHSRP-203ENST00000594745 SMARCA4P51532 1647 aa28.04■■■□□ 2.08
KHSRP-203ENST00000594745 SMARCA2P51531 1590 aa28.04■■■□□ 2.08
KHSRP-203ENST00000594745 CUX2O14529 1486 aa27.97■■■□□ 2.07
KHSRP-203ENST00000594745 HMGXB3Q12766 1538 aa27.96■■■□□ 2.07
KHSRP-203ENST00000594745 BAZ1AQ9NRL2 1556 aaPredicted RBP27.9■■■□□ 2.06
KHSRP-203ENST00000594745 BAZ1BQ9UIG0 1483 aaKnown RBP27.89■■■□□ 2.05
KHSRP-203ENST00000594745 NESP48681 1621 aa27.8■■■□□ 2.04
KHSRP-203ENST00000594745 PEG3Q9GZU2 1588 aa27.68■■■□□ 2.02
KHSRP-203ENST00000594745 MROH2BQ7Z745 1585 aa27.65■■■□□ 2.02
KHSRP-203ENST00000594745 LAMC3Q9Y6N6 1575 aa27.6■■■□□ 2.01
KHSRP-203ENST00000594745 THOC2Q8NI27 1593 aaKnown RBP27.52■■■□□ 2
KHSRP-203ENST00000594745 KIF21AQ7Z4S6 1674 aa27.48■■□□□ 1.99
KHSRP-203ENST00000594745 PDS5BQ9NTI5 1447 aa27.48■■□□□ 1.99
KHSRP-203ENST00000594745 WIZO95785 1651 aa27.35■■□□□ 1.97
KHSRP-203ENST00000594745 CADPSQ9ULU8 1353 aa27.33■■□□□ 1.97
KHSRP-203ENST00000594745 MRC2Q9UBG0 1479 aa27.24■■□□□ 1.95
KHSRP-203ENST00000594745 CEP164Q9UPV0 1460 aa27.14■■□□□ 1.94
KHSRP-203ENST00000594745 WDR62O43379 1518 aa27.11■■□□□ 1.93
KHSRP-203ENST00000594745 FANCD2Q9BXW9 1451 aa27.06■■□□□ 1.92
KHSRP-203ENST00000594745 RSF1Q96T23 1441 aaPredicted RBP27.02■■□□□ 1.92
KHSRP-203ENST00000594745 TRIM41Q8WV44 630 aa26.99■■□□□ 1.91
KHSRP-203ENST00000594745 TOP2AP11388 1531 aaKnown RBP26.99■■□□□ 1.91
KHSRP-203ENST00000594745 CFTRP13569 1480 aa26.95■■□□□ 1.91
KHSRP-203ENST00000594745 URB2Q14146 1524 aaKnown RBP26.8■■□□□ 1.88
KHSRP-203ENST00000594745 PRDM2Q13029 1718 aa26.76■■□□□ 1.88
KHSRP-203ENST00000594745 OSCARQ8IYS5 282 aa26.73■■□□□ 1.87
KHSRP-203ENST00000594745 CCDC88BA6NC98 1476 aa26.67■■□□□ 1.86
KHSRP-203ENST00000594745 IFT140Q96RY7 1462 aa26.56■■□□□ 1.84
KHSRP-203ENST00000594745 TOPBP1Q92547 1522 aa26.51■■□□□ 1.83
KHSRP-203ENST00000594745 ZNF608Q9ULD9 1512 aaPredicted RBP26.49■■□□□ 1.83
KHSRP-203ENST00000594745 ABCC8Q09428 1581 aa26.46■■□□□ 1.83
KHSRP-203ENST00000594745 DNMBPQ6XZF7 1577 aa26.42■■□□□ 1.82
KHSRP-203ENST00000594745 EIF4G3O43432 1585 aaKnown RBP26.39■■□□□ 1.82
KHSRP-203ENST00000594745 RIMBP3CA6NJZ7 1639 aa26.37■■□□□ 1.81
KHSRP-203ENST00000594745 RIMBP3BA6NNM3 1639 aa26.37■■□□□ 1.81
KHSRP-203ENST00000594745 RIMBP3Q9UFD9 1639 aa26.37■■□□□ 1.81
KHSRP-203ENST00000594745 FBLN2P98095 1184 aa26.3■■□□□ 1.8
KHSRP-203ENST00000594745 AQRO60306 1485 aaKnown RBP eCLIP26.27■■□□□ 1.82e-6■□□□□ 10.2
KHSRP-203ENST00000594745 ARHGEF11O15085 1522 aa26.26■■□□□ 1.79
KHSRP-203ENST00000594745 CHD1O14646 1710 aa26.25■■□□□ 1.79
KHSRP-203ENST00000594745 TARBP1Q13395 1621 aaKnown RBP26.25■■□□□ 1.79
KHSRP-203ENST00000594745 POLA1P09884 1462 aaPredicted RBP26.23■■□□□ 1.79
KHSRP-203ENST00000594745 CYB5RLQ6IPT4 315 aa26.16■■□□□ 1.78
KHSRP-203ENST00000594745 RAD54L2Q9Y4B4 1467 aa26.15■■□□□ 1.78
KHSRP-203ENST00000594745 SOGA1O94964 1423 aa26.14■■□□□ 1.78
KHSRP-203ENST00000594745 TDRD9Q8NDG6 1382 aaKnown RBP26.11■■□□□ 1.77
KHSRP-203ENST00000594745 FGD5Q6ZNL6 1462 aa26.08■■□□□ 1.77
KHSRP-203ENST00000594745 SNAPC4Q5SXM2 1469 aa26.03■■□□□ 1.76
KHSRP-203ENST00000594745 TRHP20396 242 aaPredicted RBP26.01■■□□□ 1.75
KHSRP-203ENST00000594745 CHMP7Q8WUX9 453 aaPredicted RBP26.01■■□□□ 1.75
KHSRP-203ENST00000594745 CUX1P39880 1505 aa25.99■■□□□ 1.75
KHSRP-203ENST00000594745 WDR97A6NE52 1622 aa25.99■■□□□ 1.75
KHSRP-203ENST00000594745 ARAP1Q96P48 1450 aa25.98■■□□□ 1.75
KHSRP-203ENST00000594745 SUPT5HO00267 1087 aaKnown RBP25.95■■□□□ 1.74
KHSRP-203ENST00000594745 GRIN2BQ13224 1484 aa25.93■■□□□ 1.74
KHSRP-203ENST00000594745 MAGI1Q96QZ7 1491 aaPredicted RBP25.93■■□□□ 1.74
KHSRP-203ENST00000594745 SYNJ1O43426 1573 aa25.92■■□□□ 1.74
KHSRP-203ENST00000594745 PBRM1Q86U86 1689 aa25.85■■□□□ 1.73
KHSRP-203ENST00000594745 SYNJ2O15056 1496 aa25.85■■□□□ 1.73
KHSRP-203ENST00000594745 CLASP1Q7Z460 1538 aa25.84■■□□□ 1.73
KHSRP-203ENST00000594745 GAPVD1Q14C86 1478 aa25.83■■□□□ 1.73
KHSRP-203ENST00000594745 ABCA10Q8WWZ4 1543 aa25.73■■□□□ 1.71
KHSRP-203ENST00000594745 ABCA5Q8WWZ7 1642 aa25.7■■□□□ 1.7
KHSRP-203ENST00000594745 WRNQ14191 1432 aaPredicted RBP eCLIP25.68■■□□□ 1.7
KHSRP-203ENST00000594745 GRIN2AQ12879 1464 aa25.59■■□□□ 1.69
KHSRP-203ENST00000594745 ADAMTS12P58397 1594 aa25.56■■□□□ 1.68
KHSRP-203ENST00000594745 TOP2BQ02880 1626 aa25.55■■□□□ 1.68
KHSRP-203ENST00000594745 BIVM-ERCC5R4GMW8 1640 aa25.55■■□□□ 1.68
KHSRP-203ENST00000594745 FHAD1B1AJZ9 1412 aa25.48■■□□□ 1.67
KHSRP-203ENST00000594745 CEP170Q5SW79 1584 aa25.48■■□□□ 1.67
KHSRP-203ENST00000594745 ERCC6L2Q5T890 1561 aa25.45■■□□□ 1.66
KHSRP-203ENST00000594745 NUP160Q12769 1436 aa25.44■■□□□ 1.66
KHSRP-203ENST00000594745 ERICH3Q5RHP9 1530 aa25.42■■□□□ 1.66
KHSRP-203ENST00000594745 AEBP2Q6ZN18 517 aaPredicted RBP25.39■■□□□ 1.66
KHSRP-203ENST00000594745 SHROOM2Q13796 1616 aa25.34■■□□□ 1.65
KHSRP-203ENST00000594745 PRG4Q92954 1404 aaPredicted RBP25.3■■□□□ 1.64
KHSRP-203ENST00000594745 JPH4Q96JJ6 628 aa25.25■■□□□ 1.63
KHSRP-203ENST00000594745 RUSC2Q8N2Y8 1516 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms