RNA–Protein interactions for RNA: ENST00000594704.5

STRN4-209, Transcript of striatin 4, humanhuman

TSL 5

Gene STRN4, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-209ENST00000594704 NISCHQ9Y2I1 1504 aa34.5■■■■□ 3.11
STRN4-209ENST00000594704 CCDC180Q9P1Z9 1646 aa30.66■■■□□ 2.5
STRN4-209ENST00000594704 ABCC9O60706 1549 aa29.76■■■□□ 2.36
STRN4-209ENST00000594704 ZCCHC6Q5VYS8 1495 aaKnown RBP28.79■■■□□ 2.2
STRN4-209ENST00000594704 NACADO15069 1562 aa28.75■■■□□ 2.19
STRN4-209ENST00000594704 RB1CC1Q8TDY2 1594 aa28.73■■■□□ 2.19
STRN4-209ENST00000594704 MYO15BQ96JP2 1530 aa28.69■■■□□ 2.18
STRN4-209ENST00000594704 DCAF1Q9Y4B6 1507 aa28.61■■■□□ 2.17
STRN4-209ENST00000594704 DCAF8L2P0C7V8 631 aa28.54■■■□□ 2.16
STRN4-209ENST00000594704 UNC13AQ9UPW8 1703 aa28.19■■■□□ 2.1
STRN4-209ENST00000594704 BICRAQ9NZM4 1560 aa27.94■■■□□ 2.06
STRN4-209ENST00000594704 SCRIBQ14160 1630 aa27.89■■■□□ 2.06
STRN4-209ENST00000594704 PABPN1Q86U42 306 aaKnown RBP eCLIP27.79■■■□□ 2.04
STRN4-209ENST00000594704 SHROOM4Q9ULL8 1493 aa27.64■■■□□ 2.02
STRN4-209ENST00000594704 DNAJC5BQ9UF47 199 aa27.25■■□□□ 1.95
STRN4-209ENST00000594704 EIF4G1Q04637 1599 aaKnown RBP27.15■■□□□ 1.94
STRN4-209ENST00000594704 CC2D2AQ9P2K1 1620 aa26.99■■□□□ 1.91
STRN4-209ENST00000594704 CECR2Q9BXF3 1484 aa26.85■■□□□ 1.89
STRN4-209ENST00000594704 SMARCA4P51532 1647 aa26.75■■□□□ 1.87
STRN4-209ENST00000594704 BAZ1AQ9NRL2 1556 aaPredicted RBP26.72■■□□□ 1.87
STRN4-209ENST00000594704 MROH2BQ7Z745 1585 aa26.58■■□□□ 1.85
STRN4-209ENST00000594704 ATAD2BQ9ULI0 1458 aa26.56■■□□□ 1.84
STRN4-209ENST00000594704 PEG3Q9GZU2 1588 aa26.55■■□□□ 1.84
STRN4-209ENST00000594704 NCAPD3P42695 1498 aa26.55■■□□□ 1.84
STRN4-209ENST00000594704 SMARCA2P51531 1590 aa26.52■■□□□ 1.84
STRN4-209ENST00000594704 HMGXB3Q12766 1538 aa26.44■■□□□ 1.82
STRN4-209ENST00000594704 RSF1Q96T23 1441 aaPredicted RBP26.31■■□□□ 1.8
STRN4-209ENST00000594704 WIZO95785 1651 aa26.31■■□□□ 1.8
STRN4-209ENST00000594704 BAZ1BQ9UIG0 1483 aaKnown RBP26.3■■□□□ 1.8
STRN4-209ENST00000594704 TOP2AP11388 1531 aaKnown RBP26.04■■□□□ 1.76
STRN4-209ENST00000594704 NESP48681 1621 aa25.84■■□□□ 1.73
STRN4-209ENST00000594704 LAMC3Q9Y6N6 1575 aa25.82■■□□□ 1.72
STRN4-209ENST00000594704 CADPSQ9ULU8 1353 aa25.73■■□□□ 1.71
STRN4-209ENST00000594704 CCDC88BA6NC98 1476 aa25.71■■□□□ 1.71
STRN4-209ENST00000594704 CFTRP13569 1480 aa25.65■■□□□ 1.7
STRN4-209ENST00000594704 ERCC6Q03468 1493 aa25.6■■□□□ 1.69
STRN4-209ENST00000594704 PDS5BQ9NTI5 1447 aa25.57■■□□□ 1.68
STRN4-209ENST00000594704 KIF21AQ7Z4S6 1674 aa25.57■■□□□ 1.68
STRN4-209ENST00000594704 SUPT5HO00267 1087 aaKnown RBP25.56■■□□□ 1.68
STRN4-209ENST00000594704 PRDM2Q13029 1718 aa25.51■■□□□ 1.68
STRN4-209ENST00000594704 THOC2Q8NI27 1593 aaKnown RBP25.48■■□□□ 1.67
STRN4-209ENST00000594704 FANCD2Q9BXW9 1451 aa25.43■■□□□ 1.66
STRN4-209ENST00000594704 CUX2O14529 1486 aa25.38■■□□□ 1.65
STRN4-209ENST00000594704 CEP164Q9UPV0 1460 aa25.38■■□□□ 1.65
STRN4-209ENST00000594704 MRC2Q9UBG0 1479 aa25.34■■□□□ 1.65
STRN4-209ENST00000594704 WDR62O43379 1518 aa25.3■■□□□ 1.64
STRN4-209ENST00000594704 URB2Q14146 1524 aaKnown RBP25.21■■□□□ 1.63
STRN4-209ENST00000594704 TOPBP1Q92547 1522 aa25.07■■□□□ 1.6
STRN4-209ENST00000594704 ABCC8Q09428 1581 aa25.05■■□□□ 1.6
STRN4-209ENST00000594704 DNMBPQ6XZF7 1577 aa25.05■■□□□ 1.6
STRN4-209ENST00000594704 CUX1P39880 1505 aa24.93■■□□□ 1.58
STRN4-209ENST00000594704 POLA1P09884 1462 aaPredicted RBP24.86■■□□□ 1.57
STRN4-209ENST00000594704 IFT140Q96RY7 1462 aa24.85■■□□□ 1.57
STRN4-209ENST00000594704 TARBP1Q13395 1621 aaKnown RBP24.83■■□□□ 1.56
STRN4-209ENST00000594704 FGD5Q6ZNL6 1462 aa24.8■■□□□ 1.56
STRN4-209ENST00000594704 BIVM-ERCC5R4GMW8 1640 aa24.78■■□□□ 1.56
STRN4-209ENST00000594704 WRNQ14191 1432 aaPredicted RBP eCLIP24.78■■□□□ 1.56
STRN4-209ENST00000594704 SYNJ1O43426 1573 aa24.76■■□□□ 1.55
STRN4-209ENST00000594704 TOP2BQ02880 1626 aa24.76■■□□□ 1.55
STRN4-209ENST00000594704 ZNF608Q9ULD9 1512 aaPredicted RBP24.75■■□□□ 1.55
STRN4-209ENST00000594704 RAD54L2Q9Y4B4 1467 aa24.72■■□□□ 1.55
STRN4-209ENST00000594704 SOGA1O94964 1423 aa24.7■■□□□ 1.55
STRN4-209ENST00000594704 WDR97A6NE52 1622 aa24.68■■□□□ 1.54
STRN4-209ENST00000594704 EIF4G3O43432 1585 aaKnown RBP24.68■■□□□ 1.54
STRN4-209ENST00000594704 ABCA10Q8WWZ4 1543 aa24.6■■□□□ 1.53
STRN4-209ENST00000594704 AQRO60306 1485 aaKnown RBP eCLIP24.59■■□□□ 1.532e-7■■■□□ 16.4
STRN4-209ENST00000594704 TDRD9Q8NDG6 1382 aaKnown RBP24.54■■□□□ 1.52
STRN4-209ENST00000594704 ABCA5Q8WWZ7 1642 aa24.52■■□□□ 1.52
STRN4-209ENST00000594704 PBRM1Q86U86 1689 aa24.44■■□□□ 1.5
STRN4-209ENST00000594704 GAPVD1Q14C86 1478 aa24.44■■□□□ 1.5
STRN4-209ENST00000594704 DNAJC5Q9H3Z4 198 aa24.42■■□□□ 1.5
STRN4-209ENST00000594704 GRIN2BQ13224 1484 aa24.42■■□□□ 1.5
STRN4-209ENST00000594704 SNAPC4Q5SXM2 1469 aa24.38■■□□□ 1.49
STRN4-209ENST00000594704 MAGI1Q96QZ7 1491 aaPredicted RBP24.37■■□□□ 1.49
STRN4-209ENST00000594704 CHD1O14646 1710 aa24.35■■□□□ 1.49
STRN4-209ENST00000594704 ERICH3Q5RHP9 1530 aa24.3■■□□□ 1.48
STRN4-209ENST00000594704 SYNJ2O15056 1496 aa24.27■■□□□ 1.48
STRN4-209ENST00000594704 OSCARQ8IYS5 282 aa24.26■■□□□ 1.47
STRN4-209ENST00000594704 ADAMTS12P58397 1594 aa24.25■■□□□ 1.47
STRN4-209ENST00000594704 KIF27Q86VH2 1401 aa24.22■■□□□ 1.47
STRN4-209ENST00000594704 TRIM41Q8WV44 630 aa24.17■■□□□ 1.46
STRN4-209ENST00000594704 FHAD1B1AJZ9 1412 aa24.17■■□□□ 1.46
STRN4-209ENST00000594704 IGF1RP08069 1367 aa24.15■■□□□ 1.46
STRN4-209ENST00000594704 FBLN2P98095 1184 aa24.14■■□□□ 1.45
STRN4-209ENST00000594704 CHMP7Q8WUX9 453 aaPredicted RBP24.14■■□□□ 1.45
STRN4-209ENST00000594704 GRIN2AQ12879 1464 aa24.13■■□□□ 1.45
STRN4-209ENST00000594704 CLASP1Q7Z460 1538 aa24.11■■□□□ 1.45
STRN4-209ENST00000594704 CUL7Q14999 1698 aa24.1■■□□□ 1.45
STRN4-209ENST00000594704 RUSC2Q8N2Y8 1516 aa24.09■■□□□ 1.45
STRN4-209ENST00000594704 NUP160Q12769 1436 aa24.05■■□□□ 1.44
STRN4-209ENST00000594704 CEP170Q5SW79 1584 aa24.03■■□□□ 1.44
STRN4-209ENST00000594704 CHIC1Q5VXU3 224 aa24.02■■□□□ 1.44
STRN4-209ENST00000594704 ARHGEF11O15085 1522 aa23.96■■□□□ 1.43
STRN4-209ENST00000594704 CARMIL1Q5VZK9 1371 aa23.96■■□□□ 1.43
STRN4-209ENST00000594704 RIMBP3CA6NJZ7 1639 aa23.95■■□□□ 1.43
STRN4-209ENST00000594704 RIMBP3BA6NNM3 1639 aa23.95■■□□□ 1.43
STRN4-209ENST00000594704 RIMBP3Q9UFD9 1639 aa23.95■■□□□ 1.43
STRN4-209ENST00000594704 SHROOM2Q13796 1616 aa23.9■■□□□ 1.42
STRN4-209ENST00000594704 PRXQ9BXM0 1461 aa23.87■■□□□ 1.41
STRN4-209ENST00000594704 RAPGEF2Q9Y4G8 1499 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms