RNA–Protein interactions for RNA: ENST00000594662.5

SMIM7-213, Transcript of small integral membrane protein 7, humanhuman

TSL 2

Gene SMIM7, Length 1,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-213ENST00000594662 NISCHQ9Y2I1 1504 aa22.67■■□□□ 1.22
SMIM7-213ENST00000594662 ABCC9O60706 1549 aa20.33■□□□□ 0.85
SMIM7-213ENST00000594662 CCDC180Q9P1Z9 1646 aa20.31■□□□□ 0.84
SMIM7-213ENST00000594662 RB1CC1Q8TDY2 1594 aa19.39■□□□□ 0.69
SMIM7-213ENST00000594662 DCAF8L2P0C7V8 631 aa19.31■□□□□ 0.68
SMIM7-213ENST00000594662 NACADO15069 1562 aa19.25■□□□□ 0.67
SMIM7-213ENST00000594662 DNAJC5BQ9UF47 199 aa19.02■□□□□ 0.64
SMIM7-213ENST00000594662 PABPN1Q86U42 306 aaKnown RBP eCLIP18.98■□□□□ 0.63
SMIM7-213ENST00000594662 MYO15BQ96JP2 1530 aa18.98■□□□□ 0.63
SMIM7-213ENST00000594662 UNC13AQ9UPW8 1703 aa18.82■□□□□ 0.6
SMIM7-213ENST00000594662 ZCCHC6Q5VYS8 1495 aaKnown RBP18.77■□□□□ 0.59
SMIM7-213ENST00000594662 DCAF1Q9Y4B6 1507 aa18.74■□□□□ 0.59
SMIM7-213ENST00000594662 BICRAQ9NZM4 1560 aa18.72■□□□□ 0.59
SMIM7-213ENST00000594662 SHROOM4Q9ULL8 1493 aa18.57■□□□□ 0.56
SMIM7-213ENST00000594662 SCRIBQ14160 1630 aa18.52■□□□□ 0.56
SMIM7-213ENST00000594662 CC2D2AQ9P2K1 1620 aa18.34■□□□□ 0.53
SMIM7-213ENST00000594662 CECR2Q9BXF3 1484 aa18.33■□□□□ 0.53
SMIM7-213ENST00000594662 EIF4G1Q04637 1599 aaKnown RBP18.31■□□□□ 0.52
SMIM7-213ENST00000594662 NCAPD3P42695 1498 aa17.76■□□□□ 0.43
SMIM7-213ENST00000594662 ATAD2BQ9ULI0 1458 aa17.69■□□□□ 0.42
SMIM7-213ENST00000594662 SMARCA2P51531 1590 aa17.69■□□□□ 0.42
SMIM7-213ENST00000594662 SMARCA4P51532 1647 aa17.66■□□□□ 0.42
SMIM7-213ENST00000594662 BAZ1AQ9NRL2 1556 aaPredicted RBP17.63■□□□□ 0.41
SMIM7-213ENST00000594662 ERCC6Q03468 1493 aa17.63■□□□□ 0.41
SMIM7-213ENST00000594662 HMGXB3Q12766 1538 aa17.62■□□□□ 0.41
SMIM7-213ENST00000594662 BAZ1BQ9UIG0 1483 aaKnown RBP17.57■□□□□ 0.4
SMIM7-213ENST00000594662 DNAJC5Q9H3Z4 198 aa17.54■□□□□ 0.4
SMIM7-213ENST00000594662 CUX2O14529 1486 aa17.54■□□□□ 0.4
SMIM7-213ENST00000594662 PEG3Q9GZU2 1588 aa17.49■□□□□ 0.39
SMIM7-213ENST00000594662 MROH2BQ7Z745 1585 aa17.45■□□□□ 0.38
SMIM7-213ENST00000594662 NESP48681 1621 aa17.43■□□□□ 0.38
SMIM7-213ENST00000594662 LAMC3Q9Y6N6 1575 aa17.36■□□□□ 0.37
SMIM7-213ENST00000594662 PDS5BQ9NTI5 1447 aa17.33■□□□□ 0.36
SMIM7-213ENST00000594662 CHIC1Q5VXU3 224 aa17.33■□□□□ 0.36
SMIM7-213ENST00000594662 CADPSQ9ULU8 1353 aa17.26■□□□□ 0.35
SMIM7-213ENST00000594662 WIZO95785 1651 aa17.23■□□□□ 0.35
SMIM7-213ENST00000594662 THOC2Q8NI27 1593 aaKnown RBP17.22■□□□□ 0.35
SMIM7-213ENST00000594662 KIF21AQ7Z4S6 1674 aa17.2■□□□□ 0.34
SMIM7-213ENST00000594662 RSF1Q96T23 1441 aaPredicted RBP17.13■□□□□ 0.33
SMIM7-213ENST00000594662 MRC2Q9UBG0 1479 aa17.12■□□□□ 0.33
SMIM7-213ENST00000594662 CEP164Q9UPV0 1460 aa17.07■□□□□ 0.32
SMIM7-213ENST00000594662 FANCD2Q9BXW9 1451 aa17.05■□□□□ 0.32
SMIM7-213ENST00000594662 TOP2AP11388 1531 aaKnown RBP17.04■□□□□ 0.32
SMIM7-213ENST00000594662 CFTRP13569 1480 aa17.04■□□□□ 0.32
SMIM7-213ENST00000594662 WDR62O43379 1518 aa17.03■□□□□ 0.32
SMIM7-213ENST00000594662 CCDC88BA6NC98 1476 aa16.86■□□□□ 0.29
SMIM7-213ENST00000594662 URB2Q14146 1524 aaKnown RBP16.85■□□□□ 0.29
SMIM7-213ENST00000594662 OSCARQ8IYS5 282 aa16.84■□□□□ 0.29
SMIM7-213ENST00000594662 TRIM41Q8WV44 630 aa16.82■□□□□ 0.28
SMIM7-213ENST00000594662 PRDM2Q13029 1718 aa16.8■□□□□ 0.28
SMIM7-213ENST00000594662 AEBP2Q6ZN18 517 aaPredicted RBP16.75■□□□□ 0.27
SMIM7-213ENST00000594662 ABCC8Q09428 1581 aa16.75■□□□□ 0.27
SMIM7-213ENST00000594662 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
SMIM7-213ENST00000594662 TOPBP1Q92547 1522 aa16.7■□□□□ 0.26
SMIM7-213ENST00000594662 ZNF608Q9ULD9 1512 aaPredicted RBP16.65■□□□□ 0.26
SMIM7-213ENST00000594662 DNMBPQ6XZF7 1577 aa16.64■□□□□ 0.25
SMIM7-213ENST00000594662 FBLN2P98095 1184 aa16.55■□□□□ 0.24
SMIM7-213ENST00000594662 EIF4G3O43432 1585 aaKnown RBP16.55■□□□□ 0.24
SMIM7-213ENST00000594662 AQRO60306 1485 aaKnown RBP eCLIP16.54■□□□□ 0.24
SMIM7-213ENST00000594662 POLA1P09884 1462 aaPredicted RBP16.52■□□□□ 0.23
SMIM7-213ENST00000594662 SOGA1O94964 1423 aa16.52■□□□□ 0.23
SMIM7-213ENST00000594662 TARBP1Q13395 1621 aaKnown RBP16.51■□□□□ 0.23
SMIM7-213ENST00000594662 SUPT5HO00267 1087 aaKnown RBP16.5■□□□□ 0.23
SMIM7-213ENST00000594662 RIMBP3CA6NJZ7 1639 aa16.47■□□□□ 0.23
SMIM7-213ENST00000594662 RIMBP3BA6NNM3 1639 aa16.47■□□□□ 0.23
SMIM7-213ENST00000594662 RIMBP3Q9UFD9 1639 aa16.47■□□□□ 0.23
SMIM7-213ENST00000594662 TDRD9Q8NDG6 1382 aaKnown RBP16.47■□□□□ 0.23
SMIM7-213ENST00000594662 RAD54L2Q9Y4B4 1467 aa16.47■□□□□ 0.23
SMIM7-213ENST00000594662 ARHGEF11O15085 1522 aa16.45■□□□□ 0.22
SMIM7-213ENST00000594662 FGD5Q6ZNL6 1462 aa16.43■□□□□ 0.22
SMIM7-213ENST00000594662 CYB5RLQ6IPT4 315 aa16.42■□□□□ 0.22
SMIM7-213ENST00000594662 CHMP7Q8WUX9 453 aaPredicted RBP16.42■□□□□ 0.22
SMIM7-213ENST00000594662 CHD1O14646 1710 aa16.41■□□□□ 0.22
SMIM7-213ENST00000594662 WDR97A6NE52 1622 aa16.4■□□□□ 0.22
SMIM7-213ENST00000594662 CUX1P39880 1505 aa16.4■□□□□ 0.22
SMIM7-213ENST00000594662 GRIN2BQ13224 1484 aa16.35■□□□□ 0.21
SMIM7-213ENST00000594662 SNAPC4Q5SXM2 1469 aa16.35■□□□□ 0.21
SMIM7-213ENST00000594662 MAGI1Q96QZ7 1491 aaPredicted RBP16.34■□□□□ 0.21
SMIM7-213ENST00000594662 GAPVD1Q14C86 1478 aa16.29■□□□□ 0.2
SMIM7-213ENST00000594662 TRHP20396 242 aaPredicted RBP16.29■□□□□ 0.2
SMIM7-213ENST00000594662 SYNJ1O43426 1573 aa16.29■□□□□ 0.2
SMIM7-213ENST00000594662 SYNJ2O15056 1496 aa16.29■□□□□ 0.2
SMIM7-213ENST00000594662 ARAP1Q96P48 1450 aa16.26■□□□□ 0.19
SMIM7-213ENST00000594662 WRNQ14191 1432 aaPredicted RBP eCLIP16.26■□□□□ 0.19
SMIM7-213ENST00000594662 ABCA10Q8WWZ4 1543 aa16.25■□□□□ 0.19
SMIM7-213ENST00000594662 CLASP1Q7Z460 1538 aa16.22■□□□□ 0.19
SMIM7-213ENST00000594662 PBRM1Q86U86 1689 aa16.21■□□□□ 0.19
SMIM7-213ENST00000594662 ABCA5Q8WWZ7 1642 aa16.17■□□□□ 0.18
SMIM7-213ENST00000594662 TOP2BQ02880 1626 aa16.16■□□□□ 0.18
SMIM7-213ENST00000594662 BIVM-ERCC5R4GMW8 1640 aa16.13■□□□□ 0.17
SMIM7-213ENST00000594662 GRIN2AQ12879 1464 aa16.11■□□□□ 0.17
SMIM7-213ENST00000594662 FHAD1B1AJZ9 1412 aa16.1■□□□□ 0.17
SMIM7-213ENST00000594662 ERICH3Q5RHP9 1530 aa16.07■□□□□ 0.16
SMIM7-213ENST00000594662 ADAMTS12P58397 1594 aa16.06■□□□□ 0.16
SMIM7-213ENST00000594662 NUP160Q12769 1436 aa16.04■□□□□ 0.16
SMIM7-213ENST00000594662 CEP170Q5SW79 1584 aa16■□□□□ 0.15
SMIM7-213ENST00000594662 JPH4Q96JJ6 628 aa15.97■□□□□ 0.15
SMIM7-213ENST00000594662 PRG4Q92954 1404 aaPredicted RBP15.94■□□□□ 0.14
SMIM7-213ENST00000594662 ERCC6L2Q5T890 1561 aa15.94■□□□□ 0.14
SMIM7-213ENST00000594662 SHROOM2Q13796 1616 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms