RNA–Protein interactions for RNA: ENST00000594656.1

PPFIA4-207, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-207ENST00000594656 NISCHQ9Y2I1 1504 aa32.72■■■□□ 2.83
PPFIA4-207ENST00000594656 ABCC9O60706 1549 aa29.87■■■□□ 2.37
PPFIA4-207ENST00000594656 CCDC180Q9P1Z9 1646 aa29.34■■■□□ 2.29
PPFIA4-207ENST00000594656 DNAJC5BQ9UF47 199 aa28.55■■■□□ 2.16
PPFIA4-207ENST00000594656 RB1CC1Q8TDY2 1594 aa28.18■■■□□ 2.1
PPFIA4-207ENST00000594656 NACADO15069 1562 aa27.93■■■□□ 2.06
PPFIA4-207ENST00000594656 DCAF8L2P0C7V8 631 aa27.88■■■□□ 2.05
PPFIA4-207ENST00000594656 PABPN1Q86U42 306 aaKnown RBP eCLIP27.87■■■□□ 2.05
PPFIA4-207ENST00000594656 UNC13AQ9UPW8 1703 aa27.47■■□□□ 1.99
PPFIA4-207ENST00000594656 MYO15BQ96JP2 1530 aa27.46■■□□□ 1.99
PPFIA4-207ENST00000594656 BICRAQ9NZM4 1560 aa27.45■■□□□ 1.99
PPFIA4-207ENST00000594656 ZCCHC6Q5VYS8 1495 aaKnown RBP27■■□□□ 1.91
PPFIA4-207ENST00000594656 DCAF1Q9Y4B6 1507 aa26.97■■□□□ 1.91
PPFIA4-207ENST00000594656 SHROOM4Q9ULL8 1493 aa26.96■■□□□ 1.91
PPFIA4-207ENST00000594656 CECR2Q9BXF3 1484 aa26.94■■□□□ 1.9
PPFIA4-207ENST00000594656 CC2D2AQ9P2K1 1620 aa26.91■■□□□ 1.9
PPFIA4-207ENST00000594656 SCRIBQ14160 1630 aa26.78■■□□□ 1.88
PPFIA4-207ENST00000594656 EIF4G1Q04637 1599 aaKnown RBP26.77■■□□□ 1.88
PPFIA4-207ENST00000594656 DNAJC5Q9H3Z4 198 aa26.43■■□□□ 1.82
PPFIA4-207ENST00000594656 NCAPD3P42695 1498 aa25.89■■□□□ 1.73
PPFIA4-207ENST00000594656 CUX2O14529 1486 aa25.85■■□□□ 1.73
PPFIA4-207ENST00000594656 ERCC6Q03468 1493 aa25.75■■□□□ 1.71
PPFIA4-207ENST00000594656 ATAD2BQ9ULI0 1458 aa25.74■■□□□ 1.71
PPFIA4-207ENST00000594656 NESP48681 1621 aa25.59■■□□□ 1.69
PPFIA4-207ENST00000594656 SMARCA2P51531 1590 aa25.55■■□□□ 1.68
PPFIA4-207ENST00000594656 HMGXB3Q12766 1538 aa25.54■■□□□ 1.68
PPFIA4-207ENST00000594656 SMARCA4P51532 1647 aa25.52■■□□□ 1.68
PPFIA4-207ENST00000594656 BAZ1BQ9UIG0 1483 aaKnown RBP25.4■■□□□ 1.66
PPFIA4-207ENST00000594656 BAZ1AQ9NRL2 1556 aaPredicted RBP25.35■■□□□ 1.65
PPFIA4-207ENST00000594656 PEG3Q9GZU2 1588 aa25.31■■□□□ 1.64
PPFIA4-207ENST00000594656 THOC2Q8NI27 1593 aaKnown RBP25.27■■□□□ 1.64
PPFIA4-207ENST00000594656 LAMC3Q9Y6N6 1575 aa25.23■■□□□ 1.63
PPFIA4-207ENST00000594656 MROH2BQ7Z745 1585 aa25.22■■□□□ 1.63
PPFIA4-207ENST00000594656 PDS5BQ9NTI5 1447 aa25.19■■□□□ 1.62
PPFIA4-207ENST00000594656 CADPSQ9ULU8 1353 aa25.1■■□□□ 1.61
PPFIA4-207ENST00000594656 KIF21AQ7Z4S6 1674 aa25.08■■□□□ 1.61
PPFIA4-207ENST00000594656 TRIM41Q8WV44 630 aa25.04■■□□□ 1.6
PPFIA4-207ENST00000594656 MRC2Q9UBG0 1479 aa24.96■■□□□ 1.59
PPFIA4-207ENST00000594656 WDR62O43379 1518 aa24.88■■□□□ 1.57
PPFIA4-207ENST00000594656 WIZO95785 1651 aa24.84■■□□□ 1.57
PPFIA4-207ENST00000594656 CEP164Q9UPV0 1460 aa24.76■■□□□ 1.55
PPFIA4-207ENST00000594656 FANCD2Q9BXW9 1451 aa24.75■■□□□ 1.55
PPFIA4-207ENST00000594656 OSCARQ8IYS5 282 aa24.74■■□□□ 1.55
PPFIA4-207ENST00000594656 CFTRP13569 1480 aa24.7■■□□□ 1.55
PPFIA4-207ENST00000594656 RSF1Q96T23 1441 aaPredicted RBP24.61■■□□□ 1.53
PPFIA4-207ENST00000594656 URB2Q14146 1524 aaKnown RBP24.59■■□□□ 1.53
PPFIA4-207ENST00000594656 TOP2AP11388 1531 aaKnown RBP24.48■■□□□ 1.51
PPFIA4-207ENST00000594656 ZNF608Q9ULD9 1512 aaPredicted RBP24.36■■□□□ 1.49
PPFIA4-207ENST00000594656 IFT140Q96RY7 1462 aa24.32■■□□□ 1.48
PPFIA4-207ENST00000594656 CCDC88BA6NC98 1476 aa24.32■■□□□ 1.48
PPFIA4-207ENST00000594656 RIMBP3CA6NJZ7 1639 aa24.3■■□□□ 1.48
PPFIA4-207ENST00000594656 RIMBP3BA6NNM3 1639 aa24.3■■□□□ 1.48
PPFIA4-207ENST00000594656 RIMBP3Q9UFD9 1639 aa24.3■■□□□ 1.48
PPFIA4-207ENST00000594656 TOPBP1Q92547 1522 aa24.24■■□□□ 1.47
PPFIA4-207ENST00000594656 ARHGEF11O15085 1522 aa24.22■■□□□ 1.47
PPFIA4-207ENST00000594656 CYB5RLQ6IPT4 315 aa24.2■■□□□ 1.46
PPFIA4-207ENST00000594656 PRDM2Q13029 1718 aa24.16■■□□□ 1.46
PPFIA4-207ENST00000594656 ABCC8Q09428 1581 aa24.14■■□□□ 1.45
PPFIA4-207ENST00000594656 AQRO60306 1485 aaKnown RBP eCLIP24.13■■□□□ 1.454e-6■■■■□ 21.7
PPFIA4-207ENST00000594656 EIF4G3O43432 1585 aaKnown RBP24.08■■□□□ 1.44
PPFIA4-207ENST00000594656 DNMBPQ6XZF7 1577 aa24.06■■□□□ 1.44
PPFIA4-207ENST00000594656 FBLN2P98095 1184 aa24.04■■□□□ 1.44
PPFIA4-207ENST00000594656 TARBP1Q13395 1621 aaKnown RBP24.02■■□□□ 1.44
PPFIA4-207ENST00000594656 TRHP20396 242 aaPredicted RBP23.99■■□□□ 1.43
PPFIA4-207ENST00000594656 ARAP1Q96P48 1450 aa23.99■■□□□ 1.43
PPFIA4-207ENST00000594656 POLA1P09884 1462 aaPredicted RBP23.97■■□□□ 1.43
PPFIA4-207ENST00000594656 RAD54L2Q9Y4B4 1467 aa23.94■■□□□ 1.42
PPFIA4-207ENST00000594656 TDRD9Q8NDG6 1382 aaKnown RBP23.94■■□□□ 1.42
PPFIA4-207ENST00000594656 CHD1O14646 1710 aa23.93■■□□□ 1.42
PPFIA4-207ENST00000594656 SOGA1O94964 1423 aa23.91■■□□□ 1.42
PPFIA4-207ENST00000594656 CHMP7Q8WUX9 453 aaPredicted RBP23.81■■□□□ 1.4
PPFIA4-207ENST00000594656 SNAPC4Q5SXM2 1469 aa23.79■■□□□ 1.4
PPFIA4-207ENST00000594656 FGD5Q6ZNL6 1462 aa23.75■■□□□ 1.39
PPFIA4-207ENST00000594656 CLASP1Q7Z460 1538 aa23.74■■□□□ 1.39
PPFIA4-207ENST00000594656 CUX1P39880 1505 aa23.69■■□□□ 1.38
PPFIA4-207ENST00000594656 GRIN2BQ13224 1484 aa23.68■■□□□ 1.38
PPFIA4-207ENST00000594656 MAGI1Q96QZ7 1491 aaPredicted RBP23.68■■□□□ 1.38
PPFIA4-207ENST00000594656 WDR97A6NE52 1622 aa23.66■■□□□ 1.38
PPFIA4-207ENST00000594656 SYNJ1O43426 1573 aa23.65■■□□□ 1.38
PPFIA4-207ENST00000594656 SYNJ2O15056 1496 aa23.64■■□□□ 1.38
PPFIA4-207ENST00000594656 GAPVD1Q14C86 1478 aa23.56■■□□□ 1.36
PPFIA4-207ENST00000594656 AEBP2Q6ZN18 517 aaPredicted RBP23.53■■□□□ 1.36
PPFIA4-207ENST00000594656 ABCA10Q8WWZ4 1543 aa23.48■■□□□ 1.35
PPFIA4-207ENST00000594656 PBRM1Q86U86 1689 aa23.41■■□□□ 1.34
PPFIA4-207ENST00000594656 ABCA5Q8WWZ7 1642 aa23.41■■□□□ 1.34
PPFIA4-207ENST00000594656 ERCC6L2Q5T890 1561 aa23.4■■□□□ 1.34
PPFIA4-207ENST00000594656 GRIN2AQ12879 1464 aa23.36■■□□□ 1.33
PPFIA4-207ENST00000594656 NUP160Q12769 1436 aa23.34■■□□□ 1.33
PPFIA4-207ENST00000594656 WRNQ14191 1432 aaPredicted RBP eCLIP23.33■■□□□ 1.32
PPFIA4-207ENST00000594656 SUPT5HO00267 1087 aaKnown RBP23.29■■□□□ 1.32
PPFIA4-207ENST00000594656 CEP170Q5SW79 1584 aa23.29■■□□□ 1.32
PPFIA4-207ENST00000594656 FHAD1B1AJZ9 1412 aa23.26■■□□□ 1.31
PPFIA4-207ENST00000594656 ADAMTS12P58397 1594 aa23.24■■□□□ 1.31
PPFIA4-207ENST00000594656 JPH4Q96JJ6 628 aa23.2■■□□□ 1.3
PPFIA4-207ENST00000594656 SHROOM2Q13796 1616 aa23.19■■□□□ 1.3
PPFIA4-207ENST00000594656 TOP2BQ02880 1626 aa23.16■■□□□ 1.3
PPFIA4-207ENST00000594656 PRG4Q92954 1404 aaPredicted RBP23.16■■□□□ 1.3
PPFIA4-207ENST00000594656 ERICH3Q5RHP9 1530 aa23.13■■□□□ 1.29
PPFIA4-207ENST00000594656 BIVM-ERCC5R4GMW8 1640 aa23.12■■□□□ 1.29
PPFIA4-207ENST00000594656 FAM69CQ0P6D2 419 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms