RNA–Protein interactions for RNA: ENST00000594293.5

SYMPK-205, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-205ENST00000594293 NISCHQ9Y2I1 1504 aa44.75■■■■■ 4.75
SYMPK-205ENST00000594293 CCDC180Q9P1Z9 1646 aa40.29■■■■■ 4.04
SYMPK-205ENST00000594293 ABCC9O60706 1549 aa40.18■■■■■ 4.02
SYMPK-205ENST00000594293 RB1CC1Q8TDY2 1594 aa38.28■■■■□ 3.72
SYMPK-205ENST00000594293 NACADO15069 1562 aa38.02■■■■□ 3.68
SYMPK-205ENST00000594293 DNAJC5BQ9UF47 199 aa37.76■■■■□ 3.64
SYMPK-205ENST00000594293 UNC13AQ9UPW8 1703 aa37.58■■■■□ 3.61
SYMPK-205ENST00000594293 MYO15BQ96JP2 1530 aa37.52■■■■□ 3.6
SYMPK-205ENST00000594293 DCAF8L2P0C7V8 631 aa37.48■■■■□ 3.59
SYMPK-205ENST00000594293 PABPN1Q86U42 306 aaKnown RBP eCLIP37.3■■■■□ 3.56
SYMPK-205ENST00000594293 BICRAQ9NZM4 1560 aa37.27■■■■□ 3.56
SYMPK-205ENST00000594293 ZCCHC6Q5VYS8 1495 aaKnown RBP37.11■■■■□ 3.53
SYMPK-205ENST00000594293 DCAF1Q9Y4B6 1507 aa37.02■■■■□ 3.52
SYMPK-205ENST00000594293 SHROOM4Q9ULL8 1493 aa36.72■■■■□ 3.47
SYMPK-205ENST00000594293 SCRIBQ14160 1630 aa36.59■■■■□ 3.45
SYMPK-205ENST00000594293 CC2D2AQ9P2K1 1620 aa36.37■■■■□ 3.41
SYMPK-205ENST00000594293 EIF4G1Q04637 1599 aaKnown RBP36.29■■■■□ 3.4
SYMPK-205ENST00000594293 CECR2Q9BXF3 1484 aa36.21■■■■□ 3.39
SYMPK-205ENST00000594293 NCAPD3P42695 1498 aa35.08■■■■□ 3.21
SYMPK-205ENST00000594293 SMARCA4P51532 1647 aa34.96■■■■□ 3.19
SYMPK-205ENST00000594293 ATAD2BQ9ULI0 1458 aa34.96■■■■□ 3.19
SYMPK-205ENST00000594293 HMGXB3Q12766 1538 aa34.86■■■■□ 3.17
SYMPK-205ENST00000594293 SMARCA2P51531 1590 aa34.86■■■■□ 3.17
SYMPK-205ENST00000594293 BAZ1AQ9NRL2 1556 aaPredicted RBP34.73■■■■□ 3.15
SYMPK-205ENST00000594293 CUX2O14529 1486 aa34.71■■■■□ 3.15
SYMPK-205ENST00000594293 DNAJC5Q9H3Z4 198 aa34.68■■■■□ 3.14
SYMPK-205ENST00000594293 PEG3Q9GZU2 1588 aa34.67■■■■□ 3.14
SYMPK-205ENST00000594293 ERCC6Q03468 1493 aa34.64■■■■□ 3.14
SYMPK-205ENST00000594293 BAZ1BQ9UIG0 1483 aaKnown RBP34.57■■■■□ 3.12
SYMPK-205ENST00000594293 NESP48681 1621 aa34.55■■■■□ 3.12
SYMPK-205ENST00000594293 MROH2BQ7Z745 1585 aa34.49■■■■□ 3.11
SYMPK-205ENST00000594293 LAMC3Q9Y6N6 1575 aa34.33■■■■□ 3.09
SYMPK-205ENST00000594293 THOC2Q8NI27 1593 aaKnown RBP34.32■■■■□ 3.08
SYMPK-205ENST00000594293 KIF21AQ7Z4S6 1674 aa34.19■■■■□ 3.06
SYMPK-205ENST00000594293 WIZO95785 1651 aa34.09■■■■□ 3.05
SYMPK-205ENST00000594293 PDS5BQ9NTI5 1447 aa34.02■■■■□ 3.04
SYMPK-205ENST00000594293 CADPSQ9ULU8 1353 aa33.95■■■■□ 3.02
SYMPK-205ENST00000594293 MRC2Q9UBG0 1479 aa33.79■■■■□ 3
SYMPK-205ENST00000594293 WDR62O43379 1518 aa33.79■■■■□ 3
SYMPK-205ENST00000594293 RSF1Q96T23 1441 aaPredicted RBP33.7■■■□□ 2.98
SYMPK-205ENST00000594293 TOP2AP11388 1531 aaKnown RBP33.64■■■□□ 2.98
SYMPK-205ENST00000594293 CEP164Q9UPV0 1460 aa33.63■■■□□ 2.97
SYMPK-205ENST00000594293 CFTRP13569 1480 aa33.61■■■□□ 2.97
SYMPK-205ENST00000594293 FANCD2Q9BXW9 1451 aa33.58■■■□□ 2.97
SYMPK-205ENST00000594293 PRDM2Q13029 1718 aa33.42■■■□□ 2.94
SYMPK-205ENST00000594293 URB2Q14146 1524 aaKnown RBP33.37■■■□□ 2.93
SYMPK-205ENST00000594293 CCDC88BA6NC98 1476 aa33.21■■■□□ 2.91
SYMPK-205ENST00000594293 TRIM41Q8WV44 630 aa33.02■■■□□ 2.88
SYMPK-205ENST00000594293 TOPBP1Q92547 1522 aa32.98■■■□□ 2.87
SYMPK-205ENST00000594293 IFT140Q96RY7 1462 aa32.96■■■□□ 2.87
SYMPK-205ENST00000594293 OSCARQ8IYS5 282 aa32.95■■■□□ 2.87
SYMPK-205ENST00000594293 ZNF608Q9ULD9 1512 aaPredicted RBP32.94■■■□□ 2.86
SYMPK-205ENST00000594293 DNMBPQ6XZF7 1577 aa32.87■■■□□ 2.85
SYMPK-205ENST00000594293 ABCC8Q09428 1581 aa32.86■■■□□ 2.85
SYMPK-205ENST00000594293 EIF4G3O43432 1585 aaKnown RBP32.82■■■□□ 2.84
SYMPK-205ENST00000594293 TARBP1Q13395 1621 aaKnown RBP32.77■■■□□ 2.84
SYMPK-205ENST00000594293 RIMBP3CA6NJZ7 1639 aa32.73■■■□□ 2.83
SYMPK-205ENST00000594293 RIMBP3BA6NNM3 1639 aa32.73■■■□□ 2.83
SYMPK-205ENST00000594293 RIMBP3Q9UFD9 1639 aa32.73■■■□□ 2.83
SYMPK-205ENST00000594293 POLA1P09884 1462 aaPredicted RBP32.64■■■□□ 2.82
SYMPK-205ENST00000594293 CHD1O14646 1710 aa32.61■■■□□ 2.81
SYMPK-205ENST00000594293 ARHGEF11O15085 1522 aa32.59■■■□□ 2.81
SYMPK-205ENST00000594293 AQRO60306 1485 aaKnown RBP eCLIP32.58■■■□□ 2.812e-11■■■■■ 48.3
SYMPK-205ENST00000594293 RAD54L2Q9Y4B4 1467 aa32.48■■■□□ 2.79
SYMPK-205ENST00000594293 WDR97A6NE52 1622 aa32.42■■■□□ 2.78
SYMPK-205ENST00000594293 FGD5Q6ZNL6 1462 aa32.41■■■□□ 2.78
SYMPK-205ENST00000594293 CUX1P39880 1505 aa32.41■■■□□ 2.78
SYMPK-205ENST00000594293 SOGA1O94964 1423 aa32.4■■■□□ 2.78
SYMPK-205ENST00000594293 TDRD9Q8NDG6 1382 aaKnown RBP32.33■■■□□ 2.77
SYMPK-205ENST00000594293 SNAPC4Q5SXM2 1469 aa32.29■■■□□ 2.76
SYMPK-205ENST00000594293 ARAP1Q96P48 1450 aa32.28■■■□□ 2.76
SYMPK-205ENST00000594293 CLASP1Q7Z460 1538 aa32.23■■■□□ 2.75
SYMPK-205ENST00000594293 FBLN2P98095 1184 aa32.21■■■□□ 2.75
SYMPK-205ENST00000594293 MAGI1Q96QZ7 1491 aaPredicted RBP32.21■■■□□ 2.75
SYMPK-205ENST00000594293 GRIN2BQ13224 1484 aa32.17■■■□□ 2.74
SYMPK-205ENST00000594293 CYB5RLQ6IPT4 315 aa32.17■■■□□ 2.74
SYMPK-205ENST00000594293 PBRM1Q86U86 1689 aa32.17■■■□□ 2.74
SYMPK-205ENST00000594293 SYNJ1O43426 1573 aa32.12■■■□□ 2.73
SYMPK-205ENST00000594293 ABCA5Q8WWZ7 1642 aa32.09■■■□□ 2.73
SYMPK-205ENST00000594293 SYNJ2O15056 1496 aa32.09■■■□□ 2.73
SYMPK-205ENST00000594293 ABCA10Q8WWZ4 1543 aa32.05■■■□□ 2.72
SYMPK-205ENST00000594293 GAPVD1Q14C86 1478 aa32.04■■■□□ 2.72
SYMPK-205ENST00000594293 CHMP7Q8WUX9 453 aaPredicted RBP32■■■□□ 2.71
SYMPK-205ENST00000594293 BIVM-ERCC5R4GMW8 1640 aa31.94■■■□□ 2.7
SYMPK-205ENST00000594293 SUPT5HO00267 1087 aaKnown RBP31.94■■■□□ 2.7
SYMPK-205ENST00000594293 TOP2BQ02880 1626 aa31.89■■■□□ 2.7
SYMPK-205ENST00000594293 ADAMTS12P58397 1594 aa31.83■■■□□ 2.69
SYMPK-205ENST00000594293 WRNQ14191 1432 aaPredicted RBP eCLIP31.82■■■□□ 2.68
SYMPK-205ENST00000594293 GRIN2AQ12879 1464 aa31.79■■■□□ 2.68
SYMPK-205ENST00000594293 TRHP20396 242 aaPredicted RBP31.77■■■□□ 2.68
SYMPK-205ENST00000594293 CEP170Q5SW79 1584 aa31.73■■■□□ 2.67
SYMPK-205ENST00000594293 NUP160Q12769 1436 aa31.71■■■□□ 2.67
SYMPK-205ENST00000594293 ERCC6L2Q5T890 1561 aa31.7■■■□□ 2.67
SYMPK-205ENST00000594293 ERICH3Q5RHP9 1530 aa31.66■■■□□ 2.66
SYMPK-205ENST00000594293 SHROOM2Q13796 1616 aa31.66■■■□□ 2.66
SYMPK-205ENST00000594293 FHAD1B1AJZ9 1412 aa31.63■■■□□ 2.65
SYMPK-205ENST00000594293 RUSC2Q8N2Y8 1516 aa31.39■■■□□ 2.62
SYMPK-205ENST00000594293 PRG4Q92954 1404 aaPredicted RBP31.32■■■□□ 2.6
SYMPK-205ENST00000594293 KIF13AQ9H1H9 1805 aa31.28■■■□□ 2.6
SYMPK-205ENST00000594293 JPH4Q96JJ6 628 aa31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms