RNA–Protein interactions for RNA: ENST00000594258.1

ARHGEF1-207, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 919 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-207ENST00000594258 NISCHQ9Y2I1 1504 aa48.69■■■■■ 5.39
ARHGEF1-207ENST00000594258 CCDC180Q9P1Z9 1646 aa43.51■■■■■ 4.56
ARHGEF1-207ENST00000594258 ABCC9O60706 1549 aa42.87■■■■■ 4.45
ARHGEF1-207ENST00000594258 RB1CC1Q8TDY2 1594 aa41.12■■■■■ 4.17
ARHGEF1-207ENST00000594258 NACADO15069 1562 aa40.99■■■■■ 4.15
ARHGEF1-207ENST00000594258 DCAF8L2P0C7V8 631 aa40.68■■■■■ 4.1
ARHGEF1-207ENST00000594258 MYO15BQ96JP2 1530 aa40.65■■■■■ 4.1
ARHGEF1-207ENST00000594258 ZCCHC6Q5VYS8 1495 aaKnown RBP40.5■■■■■ 4.07
ARHGEF1-207ENST00000594258 DCAF1Q9Y4B6 1507 aa40.32■■■■■ 4.04
ARHGEF1-207ENST00000594258 UNC13AQ9UPW8 1703 aa40.19■■■■■ 4.02
ARHGEF1-207ENST00000594258 PABPN1Q86U42 306 aaKnown RBP eCLIP39.94■■■■□ 3.981e-6■■■□□ 17.1
ARHGEF1-207ENST00000594258 BICRAQ9NZM4 1560 aa39.91■■■■□ 3.98
ARHGEF1-207ENST00000594258 DNAJC5BQ9UF47 199 aa39.7■■■■□ 3.95
ARHGEF1-207ENST00000594258 SCRIBQ14160 1630 aa39.6■■■■□ 3.93
ARHGEF1-207ENST00000594258 SHROOM4Q9ULL8 1493 aa39.49■■■■□ 3.91
ARHGEF1-207ENST00000594258 EIF4G1Q04637 1599 aaKnown RBP38.87■■■■□ 3.81
ARHGEF1-207ENST00000594258 CC2D2AQ9P2K1 1620 aa38.8■■■■□ 3.8
ARHGEF1-207ENST00000594258 CECR2Q9BXF3 1484 aa38.59■■■■□ 3.77
ARHGEF1-207ENST00000594258 SMARCA4P51532 1647 aa37.87■■■■□ 3.65
ARHGEF1-207ENST00000594258 NCAPD3P42695 1498 aa37.82■■■■□ 3.64
ARHGEF1-207ENST00000594258 BAZ1AQ9NRL2 1556 aaPredicted RBP37.77■■■■□ 3.64
ARHGEF1-207ENST00000594258 ATAD2BQ9ULI0 1458 aa37.76■■■■□ 3.63
ARHGEF1-207ENST00000594258 SMARCA2P51531 1590 aa37.71■■■■□ 3.63
ARHGEF1-207ENST00000594258 HMGXB3Q12766 1538 aa37.62■■■■□ 3.61
ARHGEF1-207ENST00000594258 PEG3Q9GZU2 1588 aa37.55■■■■□ 3.6
ARHGEF1-207ENST00000594258 MROH2BQ7Z745 1585 aa37.51■■■■□ 3.59
ARHGEF1-207ENST00000594258 BAZ1BQ9UIG0 1483 aaKnown RBP37.42■■■■□ 3.58
ARHGEF1-207ENST00000594258 WIZO95785 1651 aa37.07■■■■□ 3.52
ARHGEF1-207ENST00000594258 NESP48681 1621 aa36.99■■■■□ 3.51
ARHGEF1-207ENST00000594258 ERCC6Q03468 1493 aa36.99■■■■□ 3.51
ARHGEF1-207ENST00000594258 RSF1Q96T23 1441 aaPredicted RBP36.93■■■■□ 3.5
ARHGEF1-207ENST00000594258 LAMC3Q9Y6N6 1575 aa36.89■■■■□ 3.5
ARHGEF1-207ENST00000594258 CUX2O14529 1486 aa36.81■■■■□ 3.48
ARHGEF1-207ENST00000594258 TOP2AP11388 1531 aaKnown RBP36.69■■■■□ 3.46
ARHGEF1-207ENST00000594258 CADPSQ9ULU8 1353 aa36.66■■■■□ 3.46
ARHGEF1-207ENST00000594258 PDS5BQ9NTI5 1447 aa36.61■■■■□ 3.45
ARHGEF1-207ENST00000594258 THOC2Q8NI27 1593 aaKnown RBP36.58■■■■□ 3.45
ARHGEF1-207ENST00000594258 KIF21AQ7Z4S6 1674 aa36.58■■■■□ 3.45
ARHGEF1-207ENST00000594258 CFTRP13569 1480 aa36.38■■■■□ 3.41
ARHGEF1-207ENST00000594258 MRC2Q9UBG0 1479 aa36.29■■■■□ 3.4
ARHGEF1-207ENST00000594258 CEP164Q9UPV0 1460 aa36.25■■■■□ 3.39
ARHGEF1-207ENST00000594258 FANCD2Q9BXW9 1451 aa36.24■■■■□ 3.39
ARHGEF1-207ENST00000594258 CCDC88BA6NC98 1476 aa36.22■■■■□ 3.39
ARHGEF1-207ENST00000594258 WDR62O43379 1518 aa36.21■■■■□ 3.39
ARHGEF1-207ENST00000594258 PRDM2Q13029 1718 aa36.1■■■■□ 3.37
ARHGEF1-207ENST00000594258 DNAJC5Q9H3Z4 198 aa36.09■■■■□ 3.37
ARHGEF1-207ENST00000594258 URB2Q14146 1524 aaKnown RBP35.93■■■■□ 3.34
ARHGEF1-207ENST00000594258 TOPBP1Q92547 1522 aa35.63■■■■□ 3.29
ARHGEF1-207ENST00000594258 ABCC8Q09428 1581 aa35.61■■■■□ 3.29
ARHGEF1-207ENST00000594258 DNMBPQ6XZF7 1577 aa35.57■■■■□ 3.28
ARHGEF1-207ENST00000594258 SUPT5HO00267 1087 aaKnown RBP35.56■■■■□ 3.28
ARHGEF1-207ENST00000594258 IFT140Q96RY7 1462 aa35.51■■■■□ 3.28
ARHGEF1-207ENST00000594258 ZNF608Q9ULD9 1512 aaPredicted RBP35.37■■■■□ 3.25
ARHGEF1-207ENST00000594258 POLA1P09884 1462 aaPredicted RBP35.3■■■■□ 3.24
ARHGEF1-207ENST00000594258 TARBP1Q13395 1621 aaKnown RBP35.29■■■■□ 3.24
ARHGEF1-207ENST00000594258 EIF4G3O43432 1585 aaKnown RBP35.25■■■■□ 3.23
ARHGEF1-207ENST00000594258 CUX1P39880 1505 aa35.22■■■■□ 3.23
ARHGEF1-207ENST00000594258 FGD5Q6ZNL6 1462 aa35.16■■■■□ 3.22
ARHGEF1-207ENST00000594258 RAD54L2Q9Y4B4 1467 aa35.12■■■■□ 3.21
ARHGEF1-207ENST00000594258 OSCARQ8IYS5 282 aa35.12■■■■□ 3.21
ARHGEF1-207ENST00000594258 SOGA1O94964 1423 aa35.11■■■■□ 3.21
ARHGEF1-207ENST00000594258 AQRO60306 1485 aaKnown RBP eCLIP35.09■■■■□ 3.212e-6■□□□□ 8.5
ARHGEF1-207ENST00000594258 WDR97A6NE52 1622 aa35.03■■■■□ 3.2
ARHGEF1-207ENST00000594258 TDRD9Q8NDG6 1382 aaKnown RBP34.96■■■■□ 3.19
ARHGEF1-207ENST00000594258 CHD1O14646 1710 aa34.86■■■■□ 3.17
ARHGEF1-207ENST00000594258 BIVM-ERCC5R4GMW8 1640 aa34.84■■■■□ 3.17
ARHGEF1-207ENST00000594258 WRNQ14191 1432 aaPredicted RBP eCLIP34.82■■■■□ 3.17
ARHGEF1-207ENST00000594258 TOP2BQ02880 1626 aa34.82■■■■□ 3.16
ARHGEF1-207ENST00000594258 ABCA10Q8WWZ4 1543 aa34.81■■■■□ 3.16
ARHGEF1-207ENST00000594258 SNAPC4Q5SXM2 1469 aa34.79■■■■□ 3.16
ARHGEF1-207ENST00000594258 GRIN2BQ13224 1484 aa34.78■■■■□ 3.16
ARHGEF1-207ENST00000594258 SYNJ1O43426 1573 aa34.77■■■■□ 3.16
ARHGEF1-207ENST00000594258 MAGI1Q96QZ7 1491 aaPredicted RBP34.75■■■■□ 3.15
ARHGEF1-207ENST00000594258 ABCA5Q8WWZ7 1642 aa34.73■■■■□ 3.15
ARHGEF1-207ENST00000594258 GAPVD1Q14C86 1478 aa34.71■■■■□ 3.15
ARHGEF1-207ENST00000594258 PBRM1Q86U86 1689 aa34.7■■■■□ 3.15
ARHGEF1-207ENST00000594258 FBLN2P98095 1184 aa34.68■■■■□ 3.14
ARHGEF1-207ENST00000594258 RIMBP3CA6NJZ7 1639 aa34.66■■■■□ 3.14
ARHGEF1-207ENST00000594258 RIMBP3BA6NNM3 1639 aa34.66■■■■□ 3.14
ARHGEF1-207ENST00000594258 RIMBP3Q9UFD9 1639 aa34.66■■■■□ 3.14
ARHGEF1-207ENST00000594258 TRIM41Q8WV44 630 aa34.66■■■■□ 3.14
ARHGEF1-207ENST00000594258 ARHGEF11O15085 1522 aa34.62■■■■□ 3.13
ARHGEF1-207ENST00000594258 SYNJ2O15056 1496 aa34.62■■■■□ 3.13
ARHGEF1-207ENST00000594258 CHMP7Q8WUX9 453 aaPredicted RBP34.55■■■■□ 3.12
ARHGEF1-207ENST00000594258 CLASP1Q7Z460 1538 aa34.51■■■■□ 3.12
ARHGEF1-207ENST00000594258 ADAMTS12P58397 1594 aa34.42■■■■□ 3.1
ARHGEF1-207ENST00000594258 ERICH3Q5RHP9 1530 aa34.39■■■■□ 3.1
ARHGEF1-207ENST00000594258 GRIN2AQ12879 1464 aa34.34■■■■□ 3.09
ARHGEF1-207ENST00000594258 ARAP1Q96P48 1450 aa34.32■■■■□ 3.08
ARHGEF1-207ENST00000594258 FHAD1B1AJZ9 1412 aa34.31■■■■□ 3.08
ARHGEF1-207ENST00000594258 CYB5RLQ6IPT4 315 aa34.23■■■■□ 3.07
ARHGEF1-207ENST00000594258 NUP160Q12769 1436 aa34.22■■■■□ 3.07
ARHGEF1-207ENST00000594258 CEP170Q5SW79 1584 aa34.2■■■■□ 3.07
ARHGEF1-207ENST00000594258 KIF27Q86VH2 1401 aa34.12■■■■□ 3.05
ARHGEF1-207ENST00000594258 SHROOM2Q13796 1616 aa34.04■■■■□ 3.04
ARHGEF1-207ENST00000594258 IGF1RP08069 1367 aa34.02■■■■□ 3.04
ARHGEF1-207ENST00000594258 CUL7Q14999 1698 aa34■■■■□ 3.03
ARHGEF1-207ENST00000594258 ERCC6L2Q5T890 1561 aa33.96■■■■□ 3.03
ARHGEF1-207ENST00000594258 RUSC2Q8N2Y8 1516 aa33.94■■■■□ 3.02
ARHGEF1-207ENST00000594258 CARMIL1Q5VZK9 1371 aa33.8■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms