RNA–Protein interactions for RNA: ENST00000594257.1

NPAS1-203, Transcript of neuronal PAS domain protein 1, humanhuman

TSL 5

Gene NPAS1, Length 498 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-203ENST00000594257 NISCHQ9Y2I1 1504 aa40.79■■■■■ 4.12
NPAS1-203ENST00000594257 ABCC9O60706 1549 aa36.86■■■■□ 3.49
NPAS1-203ENST00000594257 CCDC180Q9P1Z9 1646 aa36.68■■■■□ 3.46
NPAS1-203ENST00000594257 RB1CC1Q8TDY2 1594 aa35.04■■■■□ 3.2
NPAS1-203ENST00000594257 NACADO15069 1562 aa34.74■■■■□ 3.15
NPAS1-203ENST00000594257 DNAJC5BQ9UF47 199 aa34.68■■■■□ 3.14
NPAS1-203ENST00000594257 DCAF8L2P0C7V8 631 aa34.67■■■■□ 3.14
NPAS1-203ENST00000594257 PABPN1Q86U42 306 aaKnown RBP eCLIP34.32■■■■□ 3.08
NPAS1-203ENST00000594257 UNC13AQ9UPW8 1703 aa34.21■■■■□ 3.07
NPAS1-203ENST00000594257 MYO15BQ96JP2 1530 aa34.16■■■■□ 3.06
NPAS1-203ENST00000594257 BICRAQ9NZM4 1560 aa33.93■■■■□ 3.02
NPAS1-203ENST00000594257 ZCCHC6Q5VYS8 1495 aaKnown RBP33.74■■■□□ 2.99
NPAS1-203ENST00000594257 DCAF1Q9Y4B6 1507 aa33.67■■■□□ 2.98
NPAS1-203ENST00000594257 SHROOM4Q9ULL8 1493 aa33.5■■■□□ 2.95
NPAS1-203ENST00000594257 SCRIBQ14160 1630 aa33.42■■■□□ 2.94
NPAS1-203ENST00000594257 CC2D2AQ9P2K1 1620 aa33.28■■■□□ 2.92
NPAS1-203ENST00000594257 CECR2Q9BXF3 1484 aa33.24■■■□□ 2.91
NPAS1-203ENST00000594257 EIF4G1Q04637 1599 aaKnown RBP33.16■■■□□ 2.9
NPAS1-203ENST00000594257 NCAPD3P42695 1498 aa32.05■■■□□ 2.72
NPAS1-203ENST00000594257 DNAJC5Q9H3Z4 198 aa32.03■■■□□ 2.72
NPAS1-203ENST00000594257 ATAD2BQ9ULI0 1458 aa31.92■■■□□ 2.7
NPAS1-203ENST00000594257 ERCC6Q03468 1493 aa31.91■■■□□ 2.7
NPAS1-203ENST00000594257 SMARCA2P51531 1590 aa31.87■■■□□ 2.69
NPAS1-203ENST00000594257 SMARCA4P51532 1647 aa31.86■■■□□ 2.69
NPAS1-203ENST00000594257 CUX2O14529 1486 aa31.84■■■□□ 2.69
NPAS1-203ENST00000594257 HMGXB3Q12766 1538 aa31.8■■■□□ 2.68
NPAS1-203ENST00000594257 BAZ1AQ9NRL2 1556 aaPredicted RBP31.7■■■□□ 2.67
NPAS1-203ENST00000594257 BAZ1BQ9UIG0 1483 aaKnown RBP31.65■■■□□ 2.66
NPAS1-203ENST00000594257 NESP48681 1621 aa31.59■■■□□ 2.65
NPAS1-203ENST00000594257 PEG3Q9GZU2 1588 aa31.51■■■□□ 2.64
NPAS1-203ENST00000594257 MROH2BQ7Z745 1585 aa31.41■■■□□ 2.62
NPAS1-203ENST00000594257 LAMC3Q9Y6N6 1575 aa31.38■■■□□ 2.61
NPAS1-203ENST00000594257 THOC2Q8NI27 1593 aaKnown RBP31.28■■■□□ 2.6
NPAS1-203ENST00000594257 PDS5BQ9NTI5 1447 aa31.24■■■□□ 2.59
NPAS1-203ENST00000594257 KIF21AQ7Z4S6 1674 aa31.2■■■□□ 2.59
NPAS1-203ENST00000594257 CADPSQ9ULU8 1353 aa31.1■■■□□ 2.57
NPAS1-203ENST00000594257 WIZO95785 1651 aa31.05■■■□□ 2.56
NPAS1-203ENST00000594257 MRC2Q9UBG0 1479 aa30.94■■■□□ 2.54
NPAS1-203ENST00000594257 WDR62O43379 1518 aa30.84■■■□□ 2.53
NPAS1-203ENST00000594257 CEP164Q9UPV0 1460 aa30.8■■■□□ 2.52
NPAS1-203ENST00000594257 FANCD2Q9BXW9 1451 aa30.75■■■□□ 2.51
NPAS1-203ENST00000594257 RSF1Q96T23 1441 aaPredicted RBP30.72■■■□□ 2.51
NPAS1-203ENST00000594257 CFTRP13569 1480 aa30.68■■■□□ 2.5
NPAS1-203ENST00000594257 TOP2AP11388 1531 aaKnown RBP30.64■■■□□ 2.5
NPAS1-203ENST00000594257 TRIM41Q8WV44 630 aa30.62■■■□□ 2.49
NPAS1-203ENST00000594257 URB2Q14146 1524 aaKnown RBP30.46■■■□□ 2.47
NPAS1-203ENST00000594257 OSCARQ8IYS5 282 aa30.43■■■□□ 2.46
NPAS1-203ENST00000594257 PRDM2Q13029 1718 aa30.39■■■□□ 2.46
NPAS1-203ENST00000594257 CCDC88BA6NC98 1476 aa30.31■■■□□ 2.44
NPAS1-203ENST00000594257 IFT140Q96RY7 1462 aa30.19■■■□□ 2.42
NPAS1-203ENST00000594257 TOPBP1Q92547 1522 aa30.12■■■□□ 2.41
NPAS1-203ENST00000594257 ZNF608Q9ULD9 1512 aaPredicted RBP30.12■■■□□ 2.41
NPAS1-203ENST00000594257 ABCC8Q09428 1581 aa30.11■■■□□ 2.41
NPAS1-203ENST00000594257 DNMBPQ6XZF7 1577 aa30■■■□□ 2.39
NPAS1-203ENST00000594257 RIMBP3CA6NJZ7 1639 aa29.97■■■□□ 2.39
NPAS1-203ENST00000594257 RIMBP3BA6NNM3 1639 aa29.97■■■□□ 2.39
NPAS1-203ENST00000594257 RIMBP3Q9UFD9 1639 aa29.97■■■□□ 2.39
NPAS1-203ENST00000594257 EIF4G3O43432 1585 aaKnown RBP29.95■■■□□ 2.39
NPAS1-203ENST00000594257 ARHGEF11O15085 1522 aa29.86■■■□□ 2.37
NPAS1-203ENST00000594257 AQRO60306 1485 aaKnown RBP eCLIP29.86■■■□□ 2.37
NPAS1-203ENST00000594257 TARBP1Q13395 1621 aaKnown RBP29.85■■■□□ 2.37
NPAS1-203ENST00000594257 POLA1P09884 1462 aaPredicted RBP29.8■■■□□ 2.36
NPAS1-203ENST00000594257 FBLN2P98095 1184 aa29.8■■■□□ 2.36
NPAS1-203ENST00000594257 CHD1O14646 1710 aa29.79■■■□□ 2.36
NPAS1-203ENST00000594257 CYB5RLQ6IPT4 315 aa29.74■■■□□ 2.35
NPAS1-203ENST00000594257 SOGA1O94964 1423 aa29.71■■■□□ 2.35
NPAS1-203ENST00000594257 RAD54L2Q9Y4B4 1467 aa29.7■■■□□ 2.35
NPAS1-203ENST00000594257 TDRD9Q8NDG6 1382 aaKnown RBP29.66■■■□□ 2.34
NPAS1-203ENST00000594257 FGD5Q6ZNL6 1462 aa29.6■■■□□ 2.33
NPAS1-203ENST00000594257 WDR97A6NE52 1622 aa29.56■■■□□ 2.32
NPAS1-203ENST00000594257 CHMP7Q8WUX9 453 aaPredicted RBP29.54■■■□□ 2.32
NPAS1-203ENST00000594257 SNAPC4Q5SXM2 1469 aa29.54■■■□□ 2.32
NPAS1-203ENST00000594257 ARAP1Q96P48 1450 aa29.53■■■□□ 2.32
NPAS1-203ENST00000594257 CUX1P39880 1505 aa29.52■■■□□ 2.32
NPAS1-203ENST00000594257 TRHP20396 242 aaPredicted RBP29.51■■■□□ 2.31
NPAS1-203ENST00000594257 MAGI1Q96QZ7 1491 aaPredicted RBP29.47■■■□□ 2.31
NPAS1-203ENST00000594257 GRIN2BQ13224 1484 aa29.46■■■□□ 2.31
NPAS1-203ENST00000594257 SYNJ1O43426 1573 aa29.43■■■□□ 2.3
NPAS1-203ENST00000594257 CLASP1Q7Z460 1538 aa29.39■■■□□ 2.3
NPAS1-203ENST00000594257 SYNJ2O15056 1496 aa29.37■■■□□ 2.29
NPAS1-203ENST00000594257 SUPT5HO00267 1087 aaKnown RBP29.35■■■□□ 2.29
NPAS1-203ENST00000594257 GAPVD1Q14C86 1478 aa29.34■■■□□ 2.29
NPAS1-203ENST00000594257 PBRM1Q86U86 1689 aa29.32■■■□□ 2.28
NPAS1-203ENST00000594257 ABCA10Q8WWZ4 1543 aa29.25■■■□□ 2.27
NPAS1-203ENST00000594257 ABCA5Q8WWZ7 1642 aa29.2■■■□□ 2.26
NPAS1-203ENST00000594257 WRNQ14191 1432 aaPredicted RBP eCLIP29.16■■■□□ 2.26
NPAS1-203ENST00000594257 GRIN2AQ12879 1464 aa29.06■■■□□ 2.24
NPAS1-203ENST00000594257 TOP2BQ02880 1626 aa29.03■■■□□ 2.24
NPAS1-203ENST00000594257 BIVM-ERCC5R4GMW8 1640 aa29.02■■■□□ 2.24
NPAS1-203ENST00000594257 ADAMTS12P58397 1594 aa29■■■□□ 2.23
NPAS1-203ENST00000594257 FHAD1B1AJZ9 1412 aa28.95■■■□□ 2.23
NPAS1-203ENST00000594257 NUP160Q12769 1436 aa28.94■■■□□ 2.22
NPAS1-203ENST00000594257 CEP170Q5SW79 1584 aa28.94■■■□□ 2.22
NPAS1-203ENST00000594257 ERCC6L2Q5T890 1561 aa28.92■■■□□ 2.22
NPAS1-203ENST00000594257 ERICH3Q5RHP9 1530 aa28.89■■■□□ 2.22
NPAS1-203ENST00000594257 SHROOM2Q13796 1616 aa28.83■■■□□ 2.21
NPAS1-203ENST00000594257 AEBP2Q6ZN18 517 aaPredicted RBP28.8■■■□□ 2.2
NPAS1-203ENST00000594257 PRG4Q92954 1404 aaPredicted RBP28.74■■■□□ 2.19
NPAS1-203ENST00000594257 JPH4Q96JJ6 628 aa28.73■■■□□ 2.19
NPAS1-203ENST00000594257 RUSC2Q8N2Y8 1516 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms