RNA–Protein interactions for RNA: ENST00000594164.5

ECH1-202, Transcript of enoyl-CoA hydratase 1, humanhuman

TSL 3

Gene ECH1, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECH1-202ENST00000594164 NISCHQ9Y2I1 1504 aa32.08■■■□□ 2.73
ECH1-202ENST00000594164 CCDC180Q9P1Z9 1646 aa28.79■■■□□ 2.2
ECH1-202ENST00000594164 ABCC9O60706 1549 aa28.79■■■□□ 2.2
ECH1-202ENST00000594164 RB1CC1Q8TDY2 1594 aa27.4■■□□□ 1.98
ECH1-202ENST00000594164 NACADO15069 1562 aa27.22■■□□□ 1.95
ECH1-202ENST00000594164 DNAJC5BQ9UF47 199 aa27.06■■□□□ 1.92
ECH1-202ENST00000594164 DCAF8L2P0C7V8 631 aa27.04■■□□□ 1.92
ECH1-202ENST00000594164 MYO15BQ96JP2 1530 aa26.85■■□□□ 1.89
ECH1-202ENST00000594164 UNC13AQ9UPW8 1703 aa26.82■■□□□ 1.88
ECH1-202ENST00000594164 PABPN1Q86U42 306 aaKnown RBP eCLIP26.81■■□□□ 1.88
ECH1-202ENST00000594164 BICRAQ9NZM4 1560 aa26.63■■□□□ 1.85
ECH1-202ENST00000594164 ZCCHC6Q5VYS8 1495 aaKnown RBP26.57■■□□□ 1.84
ECH1-202ENST00000594164 DCAF1Q9Y4B6 1507 aa26.5■■□□□ 1.83
ECH1-202ENST00000594164 SHROOM4Q9ULL8 1493 aa26.24■■□□□ 1.79
ECH1-202ENST00000594164 SCRIBQ14160 1630 aa26.21■■□□□ 1.79
ECH1-202ENST00000594164 CC2D2AQ9P2K1 1620 aa26.02■■□□□ 1.76
ECH1-202ENST00000594164 EIF4G1Q04637 1599 aaKnown RBP25.95■■□□□ 1.75
ECH1-202ENST00000594164 CECR2Q9BXF3 1484 aa25.93■■□□□ 1.74
ECH1-202ENST00000594164 NCAPD3P42695 1498 aa25.14■■□□□ 1.61
ECH1-202ENST00000594164 ATAD2BQ9ULI0 1458 aa25.05■■□□□ 1.6
ECH1-202ENST00000594164 SMARCA4P51532 1647 aa25.02■■□□□ 1.6
ECH1-202ENST00000594164 SMARCA2P51531 1590 aa24.97■■□□□ 1.59
ECH1-202ENST00000594164 HMGXB3Q12766 1538 aa24.94■■□□□ 1.58
ECH1-202ENST00000594164 BAZ1AQ9NRL2 1556 aaPredicted RBP24.88■■□□□ 1.57
ECH1-202ENST00000594164 DNAJC5Q9H3Z4 198 aa24.83■■□□□ 1.57
ECH1-202ENST00000594164 ERCC6Q03468 1493 aa24.83■■□□□ 1.56
ECH1-202ENST00000594164 CUX2O14529 1486 aa24.82■■□□□ 1.56
ECH1-202ENST00000594164 PEG3Q9GZU2 1588 aa24.8■■□□□ 1.56
ECH1-202ENST00000594164 BAZ1BQ9UIG0 1483 aaKnown RBP24.78■■□□□ 1.56
ECH1-202ENST00000594164 NESP48681 1621 aa24.74■■□□□ 1.55
ECH1-202ENST00000594164 MROH2BQ7Z745 1585 aa24.72■■□□□ 1.55
ECH1-202ENST00000594164 LAMC3Q9Y6N6 1575 aa24.55■■□□□ 1.52
ECH1-202ENST00000594164 THOC2Q8NI27 1593 aaKnown RBP24.49■■□□□ 1.51
ECH1-202ENST00000594164 WIZO95785 1651 aa24.43■■□□□ 1.5
ECH1-202ENST00000594164 KIF21AQ7Z4S6 1674 aa24.43■■□□□ 1.5
ECH1-202ENST00000594164 PDS5BQ9NTI5 1447 aa24.4■■□□□ 1.5
ECH1-202ENST00000594164 CADPSQ9ULU8 1353 aa24.36■■□□□ 1.49
ECH1-202ENST00000594164 MRC2Q9UBG0 1479 aa24.2■■□□□ 1.47
ECH1-202ENST00000594164 RSF1Q96T23 1441 aaPredicted RBP24.2■■□□□ 1.46
ECH1-202ENST00000594164 WDR62O43379 1518 aa24.15■■□□□ 1.46
ECH1-202ENST00000594164 TOP2AP11388 1531 aaKnown RBP24.1■■□□□ 1.45
ECH1-202ENST00000594164 CFTRP13569 1480 aa24.09■■□□□ 1.45
ECH1-202ENST00000594164 CEP164Q9UPV0 1460 aa24.09■■□□□ 1.45
ECH1-202ENST00000594164 FANCD2Q9BXW9 1451 aa24.08■■□□□ 1.45
ECH1-202ENST00000594164 URB2Q14146 1524 aaKnown RBP23.89■■□□□ 1.42
ECH1-202ENST00000594164 PRDM2Q13029 1718 aa23.85■■□□□ 1.41
ECH1-202ENST00000594164 CCDC88BA6NC98 1476 aa23.84■■□□□ 1.41
ECH1-202ENST00000594164 TRIM41Q8WV44 630 aa23.7■■□□□ 1.38
ECH1-202ENST00000594164 OSCARQ8IYS5 282 aa23.68■■□□□ 1.38
ECH1-202ENST00000594164 TOPBP1Q92547 1522 aa23.63■■□□□ 1.37
ECH1-202ENST00000594164 IFT140Q96RY7 1462 aa23.62■■□□□ 1.37
ECH1-202ENST00000594164 ZNF608Q9ULD9 1512 aaPredicted RBP23.6■■□□□ 1.37
ECH1-202ENST00000594164 ABCC8Q09428 1581 aa23.57■■□□□ 1.36
ECH1-202ENST00000594164 DNMBPQ6XZF7 1577 aa23.53■■□□□ 1.36
ECH1-202ENST00000594164 EIF4G3O43432 1585 aaKnown RBP23.45■■□□□ 1.34
ECH1-202ENST00000594164 TARBP1Q13395 1621 aaKnown RBP23.44■■□□□ 1.34
ECH1-202ENST00000594164 POLA1P09884 1462 aaPredicted RBP23.39■■□□□ 1.34
ECH1-202ENST00000594164 RIMBP3CA6NJZ7 1639 aa23.39■■□□□ 1.33
ECH1-202ENST00000594164 RIMBP3BA6NNM3 1639 aa23.39■■□□□ 1.33
ECH1-202ENST00000594164 RIMBP3Q9UFD9 1639 aa23.39■■□□□ 1.33
ECH1-202ENST00000594164 AQRO60306 1485 aaKnown RBP eCLIP23.38■■□□□ 1.336e-9■■■■■ 30.5
ECH1-202ENST00000594164 RAD54L2Q9Y4B4 1467 aa23.3■■□□□ 1.32
ECH1-202ENST00000594164 ARHGEF11O15085 1522 aa23.3■■□□□ 1.32
ECH1-202ENST00000594164 CHD1O14646 1710 aa23.3■■□□□ 1.32
ECH1-202ENST00000594164 SOGA1O94964 1423 aa23.27■■□□□ 1.32
ECH1-202ENST00000594164 FGD5Q6ZNL6 1462 aa23.24■■□□□ 1.31
ECH1-202ENST00000594164 TDRD9Q8NDG6 1382 aaKnown RBP23.23■■□□□ 1.31
ECH1-202ENST00000594164 CUX1P39880 1505 aa23.23■■□□□ 1.31
ECH1-202ENST00000594164 FBLN2P98095 1184 aa23.2■■□□□ 1.3
ECH1-202ENST00000594164 WDR97A6NE52 1622 aa23.18■■□□□ 1.3
ECH1-202ENST00000594164 SNAPC4Q5SXM2 1469 aa23.13■■□□□ 1.29
ECH1-202ENST00000594164 CYB5RLQ6IPT4 315 aa23.13■■□□□ 1.29
ECH1-202ENST00000594164 SUPT5HO00267 1087 aaKnown RBP23.1■■□□□ 1.29
ECH1-202ENST00000594164 ARAP1Q96P48 1450 aa23.08■■□□□ 1.29
ECH1-202ENST00000594164 GRIN2BQ13224 1484 aa23.07■■□□□ 1.28
ECH1-202ENST00000594164 MAGI1Q96QZ7 1491 aaPredicted RBP23.07■■□□□ 1.28
ECH1-202ENST00000594164 CHMP7Q8WUX9 453 aaPredicted RBP23.04■■□□□ 1.28
ECH1-202ENST00000594164 CLASP1Q7Z460 1538 aa23.03■■□□□ 1.28
ECH1-202ENST00000594164 SYNJ2O15056 1496 aa23■■□□□ 1.27
ECH1-202ENST00000594164 GAPVD1Q14C86 1478 aa22.99■■□□□ 1.27
ECH1-202ENST00000594164 SYNJ1O43426 1573 aa22.99■■□□□ 1.27
ECH1-202ENST00000594164 PBRM1Q86U86 1689 aa22.99■■□□□ 1.27
ECH1-202ENST00000594164 ABCA10Q8WWZ4 1543 aa22.98■■□□□ 1.27
ECH1-202ENST00000594164 ABCA5Q8WWZ7 1642 aa22.95■■□□□ 1.26
ECH1-202ENST00000594164 WRNQ14191 1432 aaPredicted RBP eCLIP22.87■■□□□ 1.25
ECH1-202ENST00000594164 BIVM-ERCC5R4GMW8 1640 aa22.86■■□□□ 1.25
ECH1-202ENST00000594164 TRHP20396 242 aaPredicted RBP22.85■■□□□ 1.25
ECH1-202ENST00000594164 TOP2BQ02880 1626 aa22.85■■□□□ 1.25
ECH1-202ENST00000594164 GRIN2AQ12879 1464 aa22.78■■□□□ 1.24
ECH1-202ENST00000594164 ADAMTS12P58397 1594 aa22.76■■□□□ 1.23
ECH1-202ENST00000594164 NUP160Q12769 1436 aa22.71■■□□□ 1.23
ECH1-202ENST00000594164 CEP170Q5SW79 1584 aa22.71■■□□□ 1.23
ECH1-202ENST00000594164 FHAD1B1AJZ9 1412 aa22.7■■□□□ 1.22
ECH1-202ENST00000594164 ERICH3Q5RHP9 1530 aa22.68■■□□□ 1.22
ECH1-202ENST00000594164 ERCC6L2Q5T890 1561 aa22.67■■□□□ 1.22
ECH1-202ENST00000594164 SHROOM2Q13796 1616 aa22.63■■□□□ 1.21
ECH1-202ENST00000594164 PRG4Q92954 1404 aaPredicted RBP22.48■■□□□ 1.19
ECH1-202ENST00000594164 JPH4Q96JJ6 628 aa22.47■■□□□ 1.19
ECH1-202ENST00000594164 RUSC2Q8N2Y8 1516 aa22.45■■□□□ 1.18
ECH1-202ENST00000594164 IGF1RP08069 1367 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms