RNA–Protein interactions for RNA: ENST00000593167.5

GRN-221, Transcript of granulin precursor, humanhuman

TSL 5

Gene GRN, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-221ENST00000593167 NISCHQ9Y2I1 1504 aa51.84■■■■■ 5.89
GRN-221ENST00000593167 CCDC180Q9P1Z9 1646 aa46.28■■■■■ 5
GRN-221ENST00000593167 ABCC9O60706 1549 aa46.08■■■■■ 4.97
GRN-221ENST00000593167 RB1CC1Q8TDY2 1594 aa43.92■■■■■ 4.62
GRN-221ENST00000593167 NACADO15069 1562 aa43.72■■■■■ 4.59
GRN-221ENST00000593167 DCAF8L2P0C7V8 631 aa43.59■■■■■ 4.57
GRN-221ENST00000593167 MYO15BQ96JP2 1530 aa43.25■■■■■ 4.51
GRN-221ENST00000593167 DNAJC5BQ9UF47 199 aa43.08■■■■■ 4.49
GRN-221ENST00000593167 ZCCHC6Q5VYS8 1495 aaKnown RBP43.03■■■■■ 4.48
GRN-221ENST00000593167 PABPN1Q86U42 306 aaKnown RBP eCLIP43■■■■■ 4.47
GRN-221ENST00000593167 UNC13AQ9UPW8 1703 aa42.91■■■■■ 4.46
GRN-221ENST00000593167 DCAF1Q9Y4B6 1507 aa42.81■■■■■ 4.44
GRN-221ENST00000593167 BICRAQ9NZM4 1560 aa42.74■■■■■ 4.43
GRN-221ENST00000593167 SCRIBQ14160 1630 aa42.24■■■■■ 4.35
GRN-221ENST00000593167 SHROOM4Q9ULL8 1493 aa42.09■■■■■ 4.33
GRN-221ENST00000593167 CC2D2AQ9P2K1 1620 aa41.62■■■■■ 4.25
GRN-221ENST00000593167 EIF4G1Q04637 1599 aaKnown RBP41.61■■■■■ 4.25
GRN-221ENST00000593167 CECR2Q9BXF3 1484 aa41.47■■■■■ 4.23
GRN-221ENST00000593167 NCAPD3P42695 1498 aa40.43■■■■■ 4.06
GRN-221ENST00000593167 ATAD2BQ9ULI0 1458 aa40.35■■■■■ 4.05
GRN-221ENST00000593167 SMARCA4P51532 1647 aa40.34■■■■■ 4.05
GRN-221ENST00000593167 SMARCA2P51531 1590 aa40.18■■■■■ 4.02
GRN-221ENST00000593167 BAZ1AQ9NRL2 1556 aaPredicted RBP40.16■■■■■ 4.02
GRN-221ENST00000593167 HMGXB3Q12766 1538 aa40.1■■■■■ 4.01
GRN-221ENST00000593167 MROH2BQ7Z745 1585 aa39.97■■■■□ 3.99
GRN-221ENST00000593167 PEG3Q9GZU2 1588 aa39.96■■■■□ 3.99
GRN-221ENST00000593167 BAZ1BQ9UIG0 1483 aaKnown RBP39.92■■■■□ 3.98
GRN-221ENST00000593167 NESP48681 1621 aa39.71■■■■□ 3.95
GRN-221ENST00000593167 ERCC6Q03468 1493 aa39.69■■■■□ 3.94
GRN-221ENST00000593167 CUX2O14529 1486 aa39.54■■■■□ 3.92
GRN-221ENST00000593167 WIZO95785 1651 aa39.46■■■■□ 3.91
GRN-221ENST00000593167 LAMC3Q9Y6N6 1575 aa39.38■■■■□ 3.9
GRN-221ENST00000593167 RSF1Q96T23 1441 aaPredicted RBP39.27■■■■□ 3.88
GRN-221ENST00000593167 DNAJC5Q9H3Z4 198 aa39.24■■■■□ 3.87
GRN-221ENST00000593167 CADPSQ9ULU8 1353 aa39.21■■■■□ 3.87
GRN-221ENST00000593167 THOC2Q8NI27 1593 aaKnown RBP39.19■■■■□ 3.86
GRN-221ENST00000593167 PDS5BQ9NTI5 1447 aa39.16■■■■□ 3.86
GRN-221ENST00000593167 KIF21AQ7Z4S6 1674 aa39.1■■■■□ 3.85
GRN-221ENST00000593167 TOP2AP11388 1531 aaKnown RBP38.98■■■■□ 3.83
GRN-221ENST00000593167 CFTRP13569 1480 aa38.83■■■■□ 3.81
GRN-221ENST00000593167 MRC2Q9UBG0 1479 aa38.82■■■■□ 3.81
GRN-221ENST00000593167 FANCD2Q9BXW9 1451 aa38.73■■■■□ 3.79
GRN-221ENST00000593167 WDR62O43379 1518 aa38.73■■■■□ 3.79
GRN-221ENST00000593167 CEP164Q9UPV0 1460 aa38.72■■■■□ 3.79
GRN-221ENST00000593167 CCDC88BA6NC98 1476 aa38.59■■■■□ 3.77
GRN-221ENST00000593167 URB2Q14146 1524 aaKnown RBP38.44■■■■□ 3.74
GRN-221ENST00000593167 PRDM2Q13029 1718 aa38.29■■■■□ 3.72
GRN-221ENST00000593167 TOPBP1Q92547 1522 aa38.05■■■■□ 3.68
GRN-221ENST00000593167 IFT140Q96RY7 1462 aa37.94■■■■□ 3.66
GRN-221ENST00000593167 ZNF608Q9ULD9 1512 aaPredicted RBP37.92■■■■□ 3.66
GRN-221ENST00000593167 ABCC8Q09428 1581 aa37.92■■■■□ 3.66
GRN-221ENST00000593167 DNMBPQ6XZF7 1577 aa37.9■■■■□ 3.66
GRN-221ENST00000593167 OSCARQ8IYS5 282 aa37.81■■■■□ 3.64
GRN-221ENST00000593167 SUPT5HO00267 1087 aaKnown RBP37.73■■■■□ 3.63
GRN-221ENST00000593167 TARBP1Q13395 1621 aaKnown RBP37.69■■■■□ 3.62
GRN-221ENST00000593167 POLA1P09884 1462 aaPredicted RBP37.69■■■■□ 3.62
GRN-221ENST00000593167 EIF4G3O43432 1585 aaKnown RBP37.65■■■■□ 3.62
GRN-221ENST00000593167 AQRO60306 1485 aaKnown RBP eCLIP37.61■■■■□ 3.619e-10■■■■■ 33.9
GRN-221ENST00000593167 TRIM41Q8WV44 630 aa37.6■■■■□ 3.61
GRN-221ENST00000593167 RAD54L2Q9Y4B4 1467 aa37.57■■■■□ 3.6
GRN-221ENST00000593167 CUX1P39880 1505 aa37.53■■■■□ 3.6
GRN-221ENST00000593167 SOGA1O94964 1423 aa37.52■■■■□ 3.6
GRN-221ENST00000593167 FGD5Q6ZNL6 1462 aa37.48■■■■□ 3.59
GRN-221ENST00000593167 TDRD9Q8NDG6 1382 aaKnown RBP37.43■■■■□ 3.58
GRN-221ENST00000593167 RIMBP3CA6NJZ7 1639 aa37.27■■■■□ 3.56
GRN-221ENST00000593167 RIMBP3BA6NNM3 1639 aa37.27■■■■□ 3.56
GRN-221ENST00000593167 RIMBP3Q9UFD9 1639 aa37.27■■■■□ 3.56
GRN-221ENST00000593167 CHD1O14646 1710 aa37.27■■■■□ 3.56
GRN-221ENST00000593167 FBLN2P98095 1184 aa37.24■■■■□ 3.55
GRN-221ENST00000593167 WDR97A6NE52 1622 aa37.24■■■■□ 3.55
GRN-221ENST00000593167 ARHGEF11O15085 1522 aa37.2■■■■□ 3.55
GRN-221ENST00000593167 SNAPC4Q5SXM2 1469 aa37.2■■■■□ 3.54
GRN-221ENST00000593167 GRIN2BQ13224 1484 aa37.13■■■■□ 3.54
GRN-221ENST00000593167 MAGI1Q96QZ7 1491 aaPredicted RBP37.08■■■■□ 3.53
GRN-221ENST00000593167 ABCA10Q8WWZ4 1543 aa37.07■■■■□ 3.53
GRN-221ENST00000593167 GAPVD1Q14C86 1478 aa37.05■■■■□ 3.52
GRN-221ENST00000593167 CHMP7Q8WUX9 453 aaPredicted RBP37.01■■■■□ 3.52
GRN-221ENST00000593167 WRNQ14191 1432 aaPredicted RBP eCLIP36.99■■■■□ 3.51
GRN-221ENST00000593167 ABCA5Q8WWZ7 1642 aa36.98■■■■□ 3.51
GRN-221ENST00000593167 SYNJ2O15056 1496 aa36.97■■■■□ 3.51
GRN-221ENST00000593167 TOP2BQ02880 1626 aa36.96■■■■□ 3.51
GRN-221ENST00000593167 SYNJ1O43426 1573 aa36.96■■■■□ 3.51
GRN-221ENST00000593167 BIVM-ERCC5R4GMW8 1640 aa36.95■■■■□ 3.51
GRN-221ENST00000593167 PBRM1Q86U86 1689 aa36.93■■■■□ 3.5
GRN-221ENST00000593167 CYB5RLQ6IPT4 315 aa36.93■■■■□ 3.5
GRN-221ENST00000593167 CLASP1Q7Z460 1538 aa36.93■■■■□ 3.5
GRN-221ENST00000593167 ARAP1Q96P48 1450 aa36.89■■■■□ 3.5
GRN-221ENST00000593167 GRIN2AQ12879 1464 aa36.67■■■■□ 3.46
GRN-221ENST00000593167 ADAMTS12P58397 1594 aa36.66■■■■□ 3.46
GRN-221ENST00000593167 FHAD1B1AJZ9 1412 aa36.59■■■■□ 3.45
GRN-221ENST00000593167 ERICH3Q5RHP9 1530 aa36.59■■■■□ 3.45
GRN-221ENST00000593167 NUP160Q12769 1436 aa36.56■■■■□ 3.44
GRN-221ENST00000593167 CEP170Q5SW79 1584 aa36.53■■■■□ 3.44
GRN-221ENST00000593167 ERCC6L2Q5T890 1561 aa36.43■■■■□ 3.42
GRN-221ENST00000593167 TRHP20396 242 aaPredicted RBP36.36■■■■□ 3.41
GRN-221ENST00000593167 SHROOM2Q13796 1616 aa36.32■■■■□ 3.4
GRN-221ENST00000593167 IGF1RP08069 1367 aa36.28■■■■□ 3.4
GRN-221ENST00000593167 KIF27Q86VH2 1401 aa36.25■■■■□ 3.39
GRN-221ENST00000593167 JPH4Q96JJ6 628 aa36.18■■■■□ 3.38
GRN-221ENST00000593167 PRG4Q92954 1404 aaPredicted RBP36.17■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms