RNA–Protein interactions for RNA: ENST00000593132.1

SEC11C-208, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

TSL 3

Gene SEC11C, Length 586 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-208ENST00000593132 NISCHQ9Y2I1 1504 aa30.53■■■□□ 2.48
SEC11C-208ENST00000593132 CCDC180Q9P1Z9 1646 aa27.09■■□□□ 1.93
SEC11C-208ENST00000593132 ABCC9O60706 1549 aa26.35■■□□□ 1.81
SEC11C-208ENST00000593132 NACADO15069 1562 aa25.52■■□□□ 1.68
SEC11C-208ENST00000593132 DCAF8L2P0C7V8 631 aa25.51■■□□□ 1.67
SEC11C-208ENST00000593132 RB1CC1Q8TDY2 1594 aa25.5■■□□□ 1.67
SEC11C-208ENST00000593132 MYO15BQ96JP2 1530 aa25.46■■□□□ 1.67
SEC11C-208ENST00000593132 ZCCHC6Q5VYS8 1495 aaKnown RBP25.42■■□□□ 1.66
SEC11C-208ENST00000593132 DCAF1Q9Y4B6 1507 aa25.35■■□□□ 1.65
SEC11C-208ENST00000593132 UNC13AQ9UPW8 1703 aa24.69■■□□□ 1.54
SEC11C-208ENST00000593132 PABPN1Q86U42 306 aaKnown RBP eCLIP24.66■■□□□ 1.54
SEC11C-208ENST00000593132 SCRIBQ14160 1630 aa24.62■■□□□ 1.53
SEC11C-208ENST00000593132 BICRAQ9NZM4 1560 aa24.59■■□□□ 1.53
SEC11C-208ENST00000593132 SHROOM4Q9ULL8 1493 aa24.58■■□□□ 1.53
SEC11C-208ENST00000593132 DNAJC5BQ9UF47 199 aa24.06■■□□□ 1.44
SEC11C-208ENST00000593132 EIF4G1Q04637 1599 aaKnown RBP23.99■■□□□ 1.43
SEC11C-208ENST00000593132 CC2D2AQ9P2K1 1620 aa23.84■■□□□ 1.41
SEC11C-208ENST00000593132 CECR2Q9BXF3 1484 aa23.73■■□□□ 1.39
SEC11C-208ENST00000593132 BAZ1AQ9NRL2 1556 aaPredicted RBP23.69■■□□□ 1.38
SEC11C-208ENST00000593132 SMARCA4P51532 1647 aa23.62■■□□□ 1.37
SEC11C-208ENST00000593132 NCAPD3P42695 1498 aa23.56■■□□□ 1.36
SEC11C-208ENST00000593132 SMARCA2P51531 1590 aa23.55■■□□□ 1.36
SEC11C-208ENST00000593132 ATAD2BQ9ULI0 1458 aa23.52■■□□□ 1.36
SEC11C-208ENST00000593132 MROH2BQ7Z745 1585 aa23.45■■□□□ 1.34
SEC11C-208ENST00000593132 PEG3Q9GZU2 1588 aa23.45■■□□□ 1.34
SEC11C-208ENST00000593132 HMGXB3Q12766 1538 aa23.4■■□□□ 1.34
SEC11C-208ENST00000593132 BAZ1BQ9UIG0 1483 aaKnown RBP23.35■■□□□ 1.33
SEC11C-208ENST00000593132 RSF1Q96T23 1441 aaPredicted RBP23.29■■□□□ 1.32
SEC11C-208ENST00000593132 WIZO95785 1651 aa23.16■■□□□ 1.3
SEC11C-208ENST00000593132 TOP2AP11388 1531 aaKnown RBP23.02■■□□□ 1.28
SEC11C-208ENST00000593132 LAMC3Q9Y6N6 1575 aa22.89■■□□□ 1.25
SEC11C-208ENST00000593132 CADPSQ9ULU8 1353 aa22.88■■□□□ 1.25
SEC11C-208ENST00000593132 PDS5BQ9NTI5 1447 aa22.81■■□□□ 1.24
SEC11C-208ENST00000593132 ERCC6Q03468 1493 aa22.8■■□□□ 1.24
SEC11C-208ENST00000593132 SUPT5HO00267 1087 aaKnown RBP22.78■■□□□ 1.24
SEC11C-208ENST00000593132 NESP48681 1621 aa22.78■■□□□ 1.24
SEC11C-208ENST00000593132 CCDC88BA6NC98 1476 aa22.75■■□□□ 1.23
SEC11C-208ENST00000593132 CFTRP13569 1480 aa22.73■■□□□ 1.23
SEC11C-208ENST00000593132 CUX2O14529 1486 aa22.56■■□□□ 1.2
SEC11C-208ENST00000593132 FANCD2Q9BXW9 1451 aa22.55■■□□□ 1.2
SEC11C-208ENST00000593132 CEP164Q9UPV0 1460 aa22.54■■□□□ 1.2
SEC11C-208ENST00000593132 KIF21AQ7Z4S6 1674 aa22.49■■□□□ 1.19
SEC11C-208ENST00000593132 MRC2Q9UBG0 1479 aa22.47■■□□□ 1.19
SEC11C-208ENST00000593132 PRDM2Q13029 1718 aa22.44■■□□□ 1.18
SEC11C-208ENST00000593132 THOC2Q8NI27 1593 aaKnown RBP22.42■■□□□ 1.18
SEC11C-208ENST00000593132 WDR62O43379 1518 aa22.36■■□□□ 1.17
SEC11C-208ENST00000593132 ABCC8Q09428 1581 aa22.36■■□□□ 1.17
SEC11C-208ENST00000593132 URB2Q14146 1524 aaKnown RBP22.26■■□□□ 1.15
SEC11C-208ENST00000593132 TOPBP1Q92547 1522 aa22.18■■□□□ 1.14
SEC11C-208ENST00000593132 DNMBPQ6XZF7 1577 aa22.17■■□□□ 1.14
SEC11C-208ENST00000593132 IFT140Q96RY7 1462 aa22.09■■□□□ 1.13
SEC11C-208ENST00000593132 WRNQ14191 1432 aaPredicted RBP eCLIP22■■□□□ 1.11
SEC11C-208ENST00000593132 CUX1P39880 1505 aa22■■□□□ 1.11
SEC11C-208ENST00000593132 POLA1P09884 1462 aaPredicted RBP21.99■■□□□ 1.11
SEC11C-208ENST00000593132 SOGA1O94964 1423 aa21.98■■□□□ 1.11
SEC11C-208ENST00000593132 FGD5Q6ZNL6 1462 aa21.95■■□□□ 1.1
SEC11C-208ENST00000593132 TOP2BQ02880 1626 aa21.89■■□□□ 1.09
SEC11C-208ENST00000593132 TARBP1Q13395 1621 aaKnown RBP21.89■■□□□ 1.09
SEC11C-208ENST00000593132 WDR97A6NE52 1622 aa21.88■■□□□ 1.09
SEC11C-208ENST00000593132 RAD54L2Q9Y4B4 1467 aa21.85■■□□□ 1.09
SEC11C-208ENST00000593132 BIVM-ERCC5R4GMW8 1640 aa21.85■■□□□ 1.09
SEC11C-208ENST00000593132 ZNF608Q9ULD9 1512 aaPredicted RBP21.85■■□□□ 1.09
SEC11C-208ENST00000593132 SYNJ1O43426 1573 aa21.8■■□□□ 1.08
SEC11C-208ENST00000593132 ABCA10Q8WWZ4 1543 aa21.8■■□□□ 1.08
SEC11C-208ENST00000593132 AQRO60306 1485 aaKnown RBP eCLIP21.78■■□□□ 1.08
SEC11C-208ENST00000593132 TDRD9Q8NDG6 1382 aaKnown RBP21.78■■□□□ 1.08
SEC11C-208ENST00000593132 EIF4G3O43432 1585 aaKnown RBP21.76■■□□□ 1.07
SEC11C-208ENST00000593132 DNAJC5Q9H3Z4 198 aa21.76■■□□□ 1.07
SEC11C-208ENST00000593132 GRIN2BQ13224 1484 aa21.71■■□□□ 1.07
SEC11C-208ENST00000593132 GAPVD1Q14C86 1478 aa21.71■■□□□ 1.07
SEC11C-208ENST00000593132 OSCARQ8IYS5 282 aa21.71■■□□□ 1.07
SEC11C-208ENST00000593132 MAGI1Q96QZ7 1491 aaPredicted RBP21.65■■□□□ 1.06
SEC11C-208ENST00000593132 ABCA5Q8WWZ7 1642 aa21.62■■□□□ 1.05
SEC11C-208ENST00000593132 TRIM41Q8WV44 630 aa21.61■■□□□ 1.05
SEC11C-208ENST00000593132 CHMP7Q8WUX9 453 aaPredicted RBP21.6■■□□□ 1.05
SEC11C-208ENST00000593132 SNAPC4Q5SXM2 1469 aa21.58■■□□□ 1.05
SEC11C-208ENST00000593132 KIF27Q86VH2 1401 aa21.58■■□□□ 1.05
SEC11C-208ENST00000593132 FBLN2P98095 1184 aa21.58■■□□□ 1.05
SEC11C-208ENST00000593132 ERICH3Q5RHP9 1530 aa21.56■■□□□ 1.04
SEC11C-208ENST00000593132 SYNJ2O15056 1496 aa21.55■■□□□ 1.04
SEC11C-208ENST00000593132 PBRM1Q86U86 1689 aa21.52■■□□□ 1.04
SEC11C-208ENST00000593132 FHAD1B1AJZ9 1412 aa21.5■■□□□ 1.03
SEC11C-208ENST00000593132 IGF1RP08069 1367 aa21.44■■□□□ 1.02
SEC11C-208ENST00000593132 CHD1O14646 1710 aa21.42■■□□□ 1.02
SEC11C-208ENST00000593132 ADAMTS12P58397 1594 aa21.4■■□□□ 1.02
SEC11C-208ENST00000593132 GRIN2AQ12879 1464 aa21.39■■□□□ 1.01
SEC11C-208ENST00000593132 CUL7Q14999 1698 aa21.35■■□□□ 1.01
SEC11C-208ENST00000593132 CARMIL1Q5VZK9 1371 aa21.34■■□□□ 1.01
SEC11C-208ENST00000593132 CHIC1Q5VXU3 224 aa21.33■■□□□ 1.01
SEC11C-208ENST00000593132 NUP160Q12769 1436 aa21.3■■□□□ 1
SEC11C-208ENST00000593132 EEA1Q15075 1411 aa21.29■■□□□ 1
SEC11C-208ENST00000593132 CLASP1Q7Z460 1538 aa21.27■■□□□ 1
SEC11C-208ENST00000593132 CSRNP3Q8WYN3 585 aa21.22■□□□□ 0.99
SEC11C-208ENST00000593132 RAPGEF2Q9Y4G8 1499 aa21.21■□□□□ 0.99
SEC11C-208ENST00000593132 RUSC2Q8N2Y8 1516 aa21.21■□□□□ 0.99
SEC11C-208ENST00000593132 ARHGEF11O15085 1522 aa21.2■□□□□ 0.98
SEC11C-208ENST00000593132 CEP170Q5SW79 1584 aa21.19■□□□□ 0.98
SEC11C-208ENST00000593132 KIAA0586Q9BVV6 1533 aa21.17■□□□□ 0.98
SEC11C-208ENST00000593132 JPH4Q96JJ6 628 aa21.16■□□□□ 0.98
SEC11C-208ENST00000593132 RIMBP3CA6NJZ7 1639 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms