RNA–Protein interactions for RNA: ENST00000593129.1

RTN2-213, Transcript of reticulon 2, humanhuman

TSL 2

Gene RTN2, Length 526 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-213ENST00000593129 NISCHQ9Y2I1 1504 aa24.98■■□□□ 1.59
RTN2-213ENST00000593129 CCDC180Q9P1Z9 1646 aa22.28■■□□□ 1.16
RTN2-213ENST00000593129 ABCC9O60706 1549 aa22.17■■□□□ 1.14
RTN2-213ENST00000593129 RB1CC1Q8TDY2 1594 aa21.14■□□□□ 0.98
RTN2-213ENST00000593129 NACADO15069 1562 aa21.06■□□□□ 0.96
RTN2-213ENST00000593129 DCAF8L2P0C7V8 631 aa21.02■□□□□ 0.96
RTN2-213ENST00000593129 MYO15BQ96JP2 1530 aa20.86■□□□□ 0.93
RTN2-213ENST00000593129 DNAJC5BQ9UF47 199 aa20.8■□□□□ 0.92
RTN2-213ENST00000593129 PABPN1Q86U42 306 aaKnown RBP eCLIP20.73■□□□□ 0.91
RTN2-213ENST00000593129 ZCCHC6Q5VYS8 1495 aaKnown RBP20.71■□□□□ 0.91
RTN2-213ENST00000593129 UNC13AQ9UPW8 1703 aa20.67■□□□□ 0.9
RTN2-213ENST00000593129 DCAF1Q9Y4B6 1507 aa20.64■□□□□ 0.9
RTN2-213ENST00000593129 BICRAQ9NZM4 1560 aa20.59■□□□□ 0.89
RTN2-213ENST00000593129 SCRIBQ14160 1630 aa20.31■□□□□ 0.84
RTN2-213ENST00000593129 SHROOM4Q9ULL8 1493 aa20.27■□□□□ 0.84
RTN2-213ENST00000593129 CC2D2AQ9P2K1 1620 aa20.03■□□□□ 0.8
RTN2-213ENST00000593129 EIF4G1Q04637 1599 aaKnown RBP20.03■□□□□ 0.8
RTN2-213ENST00000593129 CECR2Q9BXF3 1484 aa19.96■□□□□ 0.79
RTN2-213ENST00000593129 NCAPD3P42695 1498 aa19.5■□□□□ 0.71
RTN2-213ENST00000593129 ATAD2BQ9ULI0 1458 aa19.44■□□□□ 0.7
RTN2-213ENST00000593129 SMARCA4P51532 1647 aa19.41■□□□□ 0.7
RTN2-213ENST00000593129 SMARCA2P51531 1590 aa19.34■□□□□ 0.69
RTN2-213ENST00000593129 BAZ1AQ9NRL2 1556 aaPredicted RBP19.34■□□□□ 0.69
RTN2-213ENST00000593129 HMGXB3Q12766 1538 aa19.3■□□□□ 0.68
RTN2-213ENST00000593129 MROH2BQ7Z745 1585 aa19.26■□□□□ 0.67
RTN2-213ENST00000593129 PEG3Q9GZU2 1588 aa19.25■□□□□ 0.67
RTN2-213ENST00000593129 BAZ1BQ9UIG0 1483 aaKnown RBP19.21■□□□□ 0.67
RTN2-213ENST00000593129 NESP48681 1621 aa19.12■□□□□ 0.65
RTN2-213ENST00000593129 ERCC6Q03468 1493 aa19.09■□□□□ 0.65
RTN2-213ENST00000593129 CUX2O14529 1486 aa19.03■□□□□ 0.64
RTN2-213ENST00000593129 WIZO95785 1651 aa19■□□□□ 0.63
RTN2-213ENST00000593129 LAMC3Q9Y6N6 1575 aa18.97■□□□□ 0.63
RTN2-213ENST00000593129 DNAJC5Q9H3Z4 198 aa18.95■□□□□ 0.62
RTN2-213ENST00000593129 RSF1Q96T23 1441 aaPredicted RBP18.94■□□□□ 0.62
RTN2-213ENST00000593129 CADPSQ9ULU8 1353 aa18.91■□□□□ 0.62
RTN2-213ENST00000593129 PDS5BQ9NTI5 1447 aa18.87■□□□□ 0.61
RTN2-213ENST00000593129 THOC2Q8NI27 1593 aaKnown RBP18.84■□□□□ 0.61
RTN2-213ENST00000593129 KIF21AQ7Z4S6 1674 aa18.81■□□□□ 0.6
RTN2-213ENST00000593129 TOP2AP11388 1531 aaKnown RBP18.76■□□□□ 0.59
RTN2-213ENST00000593129 CFTRP13569 1480 aa18.71■□□□□ 0.59
RTN2-213ENST00000593129 MRC2Q9UBG0 1479 aa18.69■□□□□ 0.58
RTN2-213ENST00000593129 FANCD2Q9BXW9 1451 aa18.65■□□□□ 0.58
RTN2-213ENST00000593129 CEP164Q9UPV0 1460 aa18.63■□□□□ 0.57
RTN2-213ENST00000593129 WDR62O43379 1518 aa18.63■□□□□ 0.57
RTN2-213ENST00000593129 CCDC88BA6NC98 1476 aa18.6■□□□□ 0.57
RTN2-213ENST00000593129 URB2Q14146 1524 aaKnown RBP18.52■□□□□ 0.56
RTN2-213ENST00000593129 PRDM2Q13029 1718 aa18.43■□□□□ 0.54
RTN2-213ENST00000593129 TOPBP1Q92547 1522 aa18.32■□□□□ 0.52
RTN2-213ENST00000593129 ABCC8Q09428 1581 aa18.29■□□□□ 0.52
RTN2-213ENST00000593129 IFT140Q96RY7 1462 aa18.27■□□□□ 0.52
RTN2-213ENST00000593129 OSCARQ8IYS5 282 aa18.26■□□□□ 0.51
RTN2-213ENST00000593129 ZNF608Q9ULD9 1512 aaPredicted RBP18.26■□□□□ 0.51
RTN2-213ENST00000593129 DNMBPQ6XZF7 1577 aa18.24■□□□□ 0.51
RTN2-213ENST00000593129 SUPT5HO00267 1087 aaKnown RBP18.2■□□□□ 0.5
RTN2-213ENST00000593129 TARBP1Q13395 1621 aaKnown RBP18.15■□□□□ 0.5
RTN2-213ENST00000593129 POLA1P09884 1462 aaPredicted RBP18.14■□□□□ 0.5
RTN2-213ENST00000593129 AQRO60306 1485 aaKnown RBP eCLIP18.13■□□□□ 0.49
RTN2-213ENST00000593129 RAD54L2Q9Y4B4 1467 aa18.1■□□□□ 0.49
RTN2-213ENST00000593129 TRIM41Q8WV44 630 aa18.1■□□□□ 0.49
RTN2-213ENST00000593129 EIF4G3O43432 1585 aaKnown RBP18.09■□□□□ 0.49
RTN2-213ENST00000593129 SOGA1O94964 1423 aa18.09■□□□□ 0.49
RTN2-213ENST00000593129 CUX1P39880 1505 aa18.08■□□□□ 0.48
RTN2-213ENST00000593129 TDRD9Q8NDG6 1382 aaKnown RBP18.04■□□□□ 0.48
RTN2-213ENST00000593129 FGD5Q6ZNL6 1462 aa18.04■□□□□ 0.48
RTN2-213ENST00000593129 FBLN2P98095 1184 aa17.95■□□□□ 0.46
RTN2-213ENST00000593129 RIMBP3CA6NJZ7 1639 aa17.94■□□□□ 0.46
RTN2-213ENST00000593129 RIMBP3BA6NNM3 1639 aa17.94■□□□□ 0.46
RTN2-213ENST00000593129 RIMBP3Q9UFD9 1639 aa17.94■□□□□ 0.46
RTN2-213ENST00000593129 CHD1O14646 1710 aa17.93■□□□□ 0.46
RTN2-213ENST00000593129 WDR97A6NE52 1622 aa17.93■□□□□ 0.46
RTN2-213ENST00000593129 ARHGEF11O15085 1522 aa17.9■□□□□ 0.46
RTN2-213ENST00000593129 SNAPC4Q5SXM2 1469 aa17.89■□□□□ 0.45
RTN2-213ENST00000593129 GRIN2BQ13224 1484 aa17.88■□□□□ 0.45
RTN2-213ENST00000593129 MAGI1Q96QZ7 1491 aaPredicted RBP17.86■□□□□ 0.45
RTN2-213ENST00000593129 ABCA10Q8WWZ4 1543 aa17.86■□□□□ 0.45
RTN2-213ENST00000593129 GAPVD1Q14C86 1478 aa17.85■□□□□ 0.45
RTN2-213ENST00000593129 CHMP7Q8WUX9 453 aaPredicted RBP17.85■□□□□ 0.45
RTN2-213ENST00000593129 WRNQ14191 1432 aaPredicted RBP eCLIP17.82■□□□□ 0.44
RTN2-213ENST00000593129 CYB5RLQ6IPT4 315 aa17.81■□□□□ 0.44
RTN2-213ENST00000593129 SYNJ2O15056 1496 aa17.8■□□□□ 0.44
RTN2-213ENST00000593129 TOP2BQ02880 1626 aa17.8■□□□□ 0.44
RTN2-213ENST00000593129 ABCA5Q8WWZ7 1642 aa17.79■□□□□ 0.44
RTN2-213ENST00000593129 BIVM-ERCC5R4GMW8 1640 aa17.79■□□□□ 0.44
RTN2-213ENST00000593129 SYNJ1O43426 1573 aa17.79■□□□□ 0.44
RTN2-213ENST00000593129 CLASP1Q7Z460 1538 aa17.77■□□□□ 0.44
RTN2-213ENST00000593129 PBRM1Q86U86 1689 aa17.76■□□□□ 0.43
RTN2-213ENST00000593129 ARAP1Q96P48 1450 aa17.75■□□□□ 0.43
RTN2-213ENST00000593129 GRIN2AQ12879 1464 aa17.65■□□□□ 0.42
RTN2-213ENST00000593129 FHAD1B1AJZ9 1412 aa17.64■□□□□ 0.41
RTN2-213ENST00000593129 ADAMTS12P58397 1594 aa17.63■□□□□ 0.41
RTN2-213ENST00000593129 ERICH3Q5RHP9 1530 aa17.62■□□□□ 0.41
RTN2-213ENST00000593129 NUP160Q12769 1436 aa17.61■□□□□ 0.41
RTN2-213ENST00000593129 CEP170Q5SW79 1584 aa17.57■□□□□ 0.4
RTN2-213ENST00000593129 ERCC6L2Q5T890 1561 aa17.53■□□□□ 0.4
RTN2-213ENST00000593129 IGF1RP08069 1367 aa17.53■□□□□ 0.4
RTN2-213ENST00000593129 TRHP20396 242 aaPredicted RBP17.52■□□□□ 0.4
RTN2-213ENST00000593129 SHROOM2Q13796 1616 aa17.49■□□□□ 0.39
RTN2-213ENST00000593129 JPH4Q96JJ6 628 aa17.47■□□□□ 0.39
RTN2-213ENST00000593129 KIF27Q86VH2 1401 aa17.47■□□□□ 0.39
RTN2-213ENST00000593129 PRG4Q92954 1404 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 183 ms