RNA–Protein interactions for RNA: ENST00000593021.1

FARSA-210, Transcript of phenylalanyl-tRNA synthetase subunit alpha, humanhuman

TSL 5

Gene FARSA, Length 1,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARSA-210ENST00000593021 NISCHQ9Y2I1 1504 aa46.59■■■■■ 5.05
FARSA-210ENST00000593021 CCDC180Q9P1Z9 1646 aa41.5■■■■■ 4.23
FARSA-210ENST00000593021 ABCC9O60706 1549 aa41.22■■■■■ 4.19
FARSA-210ENST00000593021 RB1CC1Q8TDY2 1594 aa39.31■■■■□ 3.88
FARSA-210ENST00000593021 DCAF8L2P0C7V8 631 aa39.21■■■■□ 3.87
FARSA-210ENST00000593021 NACADO15069 1562 aa39.16■■■■□ 3.86
FARSA-210ENST00000593021 MYO15BQ96JP2 1530 aa38.74■■■■□ 3.79
FARSA-210ENST00000593021 ZCCHC6Q5VYS8 1495 aaKnown RBP38.71■■■■□ 3.79
FARSA-210ENST00000593021 PABPN1Q86U42 306 aaKnown RBP eCLIP38.52■■■■□ 3.76
FARSA-210ENST00000593021 UNC13AQ9UPW8 1703 aa38.49■■■■□ 3.75
FARSA-210ENST00000593021 DCAF1Q9Y4B6 1507 aa38.44■■■■□ 3.74
FARSA-210ENST00000593021 DNAJC5BQ9UF47 199 aa38.39■■■■□ 3.74
FARSA-210ENST00000593021 BICRAQ9NZM4 1560 aa38.27■■■■□ 3.72
FARSA-210ENST00000593021 SCRIBQ14160 1630 aa37.96■■■■□ 3.67
FARSA-210ENST00000593021 SHROOM4Q9ULL8 1493 aa37.6■■■■□ 3.61
FARSA-210ENST00000593021 EIF4G1Q04637 1599 aaKnown RBP37.24■■■■□ 3.55
FARSA-210ENST00000593021 CC2D2AQ9P2K1 1620 aa37.21■■■■□ 3.55
FARSA-210ENST00000593021 CECR2Q9BXF3 1484 aa37.04■■■■□ 3.52
FARSA-210ENST00000593021 SMARCA4P51532 1647 aa36.23■■■■□ 3.39
FARSA-210ENST00000593021 NCAPD3P42695 1498 aa36.2■■■■□ 3.39
FARSA-210ENST00000593021 ATAD2BQ9ULI0 1458 aa36.18■■■■□ 3.38
FARSA-210ENST00000593021 BAZ1AQ9NRL2 1556 aaPredicted RBP36.08■■■■□ 3.37
FARSA-210ENST00000593021 SMARCA2P51531 1590 aa36.02■■■■□ 3.36
FARSA-210ENST00000593021 MROH2BQ7Z745 1585 aa35.97■■■■□ 3.35
FARSA-210ENST00000593021 HMGXB3Q12766 1538 aa35.92■■■■□ 3.34
FARSA-210ENST00000593021 PEG3Q9GZU2 1588 aa35.85■■■■□ 3.33
FARSA-210ENST00000593021 BAZ1BQ9UIG0 1483 aaKnown RBP35.81■■■■□ 3.32
FARSA-210ENST00000593021 NESP48681 1621 aa35.57■■■■□ 3.29
FARSA-210ENST00000593021 WIZO95785 1651 aa35.54■■■■□ 3.28
FARSA-210ENST00000593021 ERCC6Q03468 1493 aa35.47■■■■□ 3.27
FARSA-210ENST00000593021 RSF1Q96T23 1441 aaPredicted RBP35.38■■■■□ 3.25
FARSA-210ENST00000593021 LAMC3Q9Y6N6 1575 aa35.25■■■■□ 3.23
FARSA-210ENST00000593021 CUX2O14529 1486 aa35.22■■■■□ 3.23
FARSA-210ENST00000593021 CADPSQ9ULU8 1353 aa35.13■■■■□ 3.21
FARSA-210ENST00000593021 TOP2AP11388 1531 aaKnown RBP35.06■■■■□ 3.2
FARSA-210ENST00000593021 PDS5BQ9NTI5 1447 aa35.05■■■■□ 3.2
FARSA-210ENST00000593021 KIF21AQ7Z4S6 1674 aa35.05■■■■□ 3.2
FARSA-210ENST00000593021 THOC2Q8NI27 1593 aaKnown RBP35.03■■■■□ 3.2
FARSA-210ENST00000593021 CFTRP13569 1480 aa34.83■■■■□ 3.17
FARSA-210ENST00000593021 DNAJC5Q9H3Z4 198 aa34.78■■■■□ 3.16
FARSA-210ENST00000593021 MRC2Q9UBG0 1479 aa34.74■■■■□ 3.15
FARSA-210ENST00000593021 CCDC88BA6NC98 1476 aa34.73■■■■□ 3.15
FARSA-210ENST00000593021 FANCD2Q9BXW9 1451 aa34.73■■■■□ 3.15
FARSA-210ENST00000593021 CEP164Q9UPV0 1460 aa34.69■■■■□ 3.14
FARSA-210ENST00000593021 WDR62O43379 1518 aa34.65■■■■□ 3.14
FARSA-210ENST00000593021 URB2Q14146 1524 aaKnown RBP34.45■■■■□ 3.11
FARSA-210ENST00000593021 PRDM2Q13029 1718 aa34.41■■■■□ 3.1
FARSA-210ENST00000593021 SUPT5HO00267 1087 aaKnown RBP34.2■■■■□ 3.07
FARSA-210ENST00000593021 TOPBP1Q92547 1522 aa34.14■■■■□ 3.06
FARSA-210ENST00000593021 DNMBPQ6XZF7 1577 aa34■■■■□ 3.03
FARSA-210ENST00000593021 ABCC8Q09428 1581 aa33.99■■■■□ 3.03
FARSA-210ENST00000593021 ZNF608Q9ULD9 1512 aaPredicted RBP33.99■■■■□ 3.03
FARSA-210ENST00000593021 IFT140Q96RY7 1462 aa33.98■■■■□ 3.03
FARSA-210ENST00000593021 POLA1P09884 1462 aaPredicted RBP33.82■■■■□ 3.01
FARSA-210ENST00000593021 TARBP1Q13395 1621 aaKnown RBP33.79■■■■□ 3
FARSA-210ENST00000593021 OSCARQ8IYS5 282 aa33.75■■■□□ 2.99
FARSA-210ENST00000593021 RAD54L2Q9Y4B4 1467 aa33.75■■■□□ 2.99
FARSA-210ENST00000593021 CUX1P39880 1505 aa33.74■■■□□ 2.99
FARSA-210ENST00000593021 EIF4G3O43432 1585 aaKnown RBP33.73■■■□□ 2.99
FARSA-210ENST00000593021 AQRO60306 1485 aaKnown RBP eCLIP33.73■■■□□ 2.994e-7■■■■□ 21.2
FARSA-210ENST00000593021 SOGA1O94964 1423 aa33.68■■■□□ 2.98
FARSA-210ENST00000593021 FGD5Q6ZNL6 1462 aa33.68■■■□□ 2.98
FARSA-210ENST00000593021 TDRD9Q8NDG6 1382 aaKnown RBP33.6■■■□□ 2.97
FARSA-210ENST00000593021 TRIM41Q8WV44 630 aa33.48■■■□□ 2.95
FARSA-210ENST00000593021 CHD1O14646 1710 aa33.39■■■□□ 2.94
FARSA-210ENST00000593021 FBLN2P98095 1184 aa33.39■■■□□ 2.94
FARSA-210ENST00000593021 WDR97A6NE52 1622 aa33.37■■■□□ 2.93
FARSA-210ENST00000593021 SNAPC4Q5SXM2 1469 aa33.35■■■□□ 2.93
FARSA-210ENST00000593021 WRNQ14191 1432 aaPredicted RBP eCLIP33.32■■■□□ 2.92
FARSA-210ENST00000593021 SYNJ1O43426 1573 aa33.3■■■□□ 2.92
FARSA-210ENST00000593021 ABCA10Q8WWZ4 1543 aa33.29■■■□□ 2.92
FARSA-210ENST00000593021 GRIN2BQ13224 1484 aa33.29■■■□□ 2.92
FARSA-210ENST00000593021 RIMBP3CA6NJZ7 1639 aa33.26■■■□□ 2.91
FARSA-210ENST00000593021 RIMBP3BA6NNM3 1639 aa33.26■■■□□ 2.91
FARSA-210ENST00000593021 TOP2BQ02880 1626 aa33.26■■■□□ 2.91
FARSA-210ENST00000593021 RIMBP3Q9UFD9 1639 aa33.26■■■□□ 2.91
FARSA-210ENST00000593021 GAPVD1Q14C86 1478 aa33.25■■■□□ 2.91
FARSA-210ENST00000593021 BIVM-ERCC5R4GMW8 1640 aa33.25■■■□□ 2.91
FARSA-210ENST00000593021 MAGI1Q96QZ7 1491 aaPredicted RBP33.22■■■□□ 2.91
FARSA-210ENST00000593021 ARHGEF11O15085 1522 aa33.21■■■□□ 2.91
FARSA-210ENST00000593021 ABCA5Q8WWZ7 1642 aa33.2■■■□□ 2.9
FARSA-210ENST00000593021 CHMP7Q8WUX9 453 aaPredicted RBP33.18■■■□□ 2.9
FARSA-210ENST00000593021 PBRM1Q86U86 1689 aa33.17■■■□□ 2.9
FARSA-210ENST00000593021 SYNJ2O15056 1496 aa33.12■■■□□ 2.89
FARSA-210ENST00000593021 CLASP1Q7Z460 1538 aa33.04■■■□□ 2.88
FARSA-210ENST00000593021 CYB5RLQ6IPT4 315 aa33■■■□□ 2.87
FARSA-210ENST00000593021 ARAP1Q96P48 1450 aa32.94■■■□□ 2.86
FARSA-210ENST00000593021 ADAMTS12P58397 1594 aa32.91■■■□□ 2.86
FARSA-210ENST00000593021 GRIN2AQ12879 1464 aa32.88■■■□□ 2.85
FARSA-210ENST00000593021 ERICH3Q5RHP9 1530 aa32.85■■■□□ 2.85
FARSA-210ENST00000593021 FHAD1B1AJZ9 1412 aa32.84■■■□□ 2.85
FARSA-210ENST00000593021 CEP170Q5SW79 1584 aa32.78■■■□□ 2.84
FARSA-210ENST00000593021 NUP160Q12769 1436 aa32.77■■■□□ 2.84
FARSA-210ENST00000593021 ERCC6L2Q5T890 1561 aa32.66■■■□□ 2.82
FARSA-210ENST00000593021 IGF1RP08069 1367 aa32.64■■■□□ 2.82
FARSA-210ENST00000593021 KIF27Q86VH2 1401 aa32.62■■■□□ 2.81
FARSA-210ENST00000593021 SHROOM2Q13796 1616 aa32.54■■■□□ 2.8
FARSA-210ENST00000593021 JPH4Q96JJ6 628 aa32.46■■■□□ 2.79
FARSA-210ENST00000593021 TRHP20396 242 aaPredicted RBP32.44■■■□□ 2.78
FARSA-210ENST00000593021 RUSC2Q8N2Y8 1516 aa32.43■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms