RNA–Protein interactions for RNA: ENST00000592967.5

SPC24-207, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 3

Gene SPC24, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-207ENST00000592967 NISCHQ9Y2I1 1504 aa39.49■■■■□ 3.91
SPC24-207ENST00000592967 CCDC180Q9P1Z9 1646 aa34.96■■■■□ 3.19
SPC24-207ENST00000592967 ABCC9O60706 1549 aa34.33■■■■□ 3.09
SPC24-207ENST00000592967 DCAF8L2P0C7V8 631 aa33.17■■■□□ 2.9
SPC24-207ENST00000592967 RB1CC1Q8TDY2 1594 aa32.96■■■□□ 2.87
SPC24-207ENST00000592967 NACADO15069 1562 aa32.94■■■□□ 2.86
SPC24-207ENST00000592967 ZCCHC6Q5VYS8 1495 aaKnown RBP32.86■■■□□ 2.85
SPC24-207ENST00000592967 MYO15BQ96JP2 1530 aa32.72■■■□□ 2.83
SPC24-207ENST00000592967 DCAF1Q9Y4B6 1507 aa32.61■■■□□ 2.81
SPC24-207ENST00000592967 PABPN1Q86U42 306 aaKnown RBP eCLIP32.19■■■□□ 2.74
SPC24-207ENST00000592967 UNC13AQ9UPW8 1703 aa32.18■■■□□ 2.74
SPC24-207ENST00000592967 SCRIBQ14160 1630 aa32■■■□□ 2.71
SPC24-207ENST00000592967 BICRAQ9NZM4 1560 aa31.98■■■□□ 2.71
SPC24-207ENST00000592967 DNAJC5BQ9UF47 199 aa31.59■■■□□ 2.65
SPC24-207ENST00000592967 SHROOM4Q9ULL8 1493 aa31.56■■■□□ 2.64
SPC24-207ENST00000592967 EIF4G1Q04637 1599 aaKnown RBP31.13■■■□□ 2.57
SPC24-207ENST00000592967 CC2D2AQ9P2K1 1620 aa31.01■■■□□ 2.55
SPC24-207ENST00000592967 CECR2Q9BXF3 1484 aa30.82■■■□□ 2.53
SPC24-207ENST00000592967 SMARCA4P51532 1647 aa30.58■■■□□ 2.49
SPC24-207ENST00000592967 BAZ1AQ9NRL2 1556 aaPredicted RBP30.56■■■□□ 2.48
SPC24-207ENST00000592967 ATAD2BQ9ULI0 1458 aa30.47■■■□□ 2.47
SPC24-207ENST00000592967 MROH2BQ7Z745 1585 aa30.45■■■□□ 2.47
SPC24-207ENST00000592967 NCAPD3P42695 1498 aa30.44■■■□□ 2.46
SPC24-207ENST00000592967 SMARCA2P51531 1590 aa30.37■■■□□ 2.45
SPC24-207ENST00000592967 PEG3Q9GZU2 1588 aa30.27■■■□□ 2.44
SPC24-207ENST00000592967 HMGXB3Q12766 1538 aa30.21■■■□□ 2.43
SPC24-207ENST00000592967 BAZ1BQ9UIG0 1483 aaKnown RBP30.19■■■□□ 2.42
SPC24-207ENST00000592967 RSF1Q96T23 1441 aaPredicted RBP30.14■■■□□ 2.42
SPC24-207ENST00000592967 WIZO95785 1651 aa30.11■■■□□ 2.41
SPC24-207ENST00000592967 TOP2AP11388 1531 aaKnown RBP29.76■■■□□ 2.35
SPC24-207ENST00000592967 NESP48681 1621 aa29.73■■■□□ 2.35
SPC24-207ENST00000592967 CADPSQ9ULU8 1353 aa29.59■■■□□ 2.33
SPC24-207ENST00000592967 LAMC3Q9Y6N6 1575 aa29.56■■■□□ 2.32
SPC24-207ENST00000592967 ERCC6Q03468 1493 aa29.55■■■□□ 2.32
SPC24-207ENST00000592967 SUPT5HO00267 1087 aaKnown RBP29.53■■■□□ 2.32
SPC24-207ENST00000592967 CCDC88BA6NC98 1476 aa29.48■■■□□ 2.31
SPC24-207ENST00000592967 PDS5BQ9NTI5 1447 aa29.44■■■□□ 2.3
SPC24-207ENST00000592967 CFTRP13569 1480 aa29.38■■■□□ 2.29
SPC24-207ENST00000592967 KIF21AQ7Z4S6 1674 aa29.28■■■□□ 2.28
SPC24-207ENST00000592967 FANCD2Q9BXW9 1451 aa29.22■■■□□ 2.27
SPC24-207ENST00000592967 CUX2O14529 1486 aa29.18■■■□□ 2.26
SPC24-207ENST00000592967 THOC2Q8NI27 1593 aaKnown RBP29.16■■■□□ 2.26
SPC24-207ENST00000592967 CEP164Q9UPV0 1460 aa29.14■■■□□ 2.26
SPC24-207ENST00000592967 MRC2Q9UBG0 1479 aa29.1■■■□□ 2.25
SPC24-207ENST00000592967 PRDM2Q13029 1718 aa29.02■■■□□ 2.24
SPC24-207ENST00000592967 WDR62O43379 1518 aa28.98■■■□□ 2.23
SPC24-207ENST00000592967 URB2Q14146 1524 aaKnown RBP28.92■■■□□ 2.22
SPC24-207ENST00000592967 TOPBP1Q92547 1522 aa28.74■■■□□ 2.19
SPC24-207ENST00000592967 ABCC8Q09428 1581 aa28.73■■■□□ 2.19
SPC24-207ENST00000592967 DNMBPQ6XZF7 1577 aa28.67■■■□□ 2.18
SPC24-207ENST00000592967 CUX1P39880 1505 aa28.55■■■□□ 2.16
SPC24-207ENST00000592967 IFT140Q96RY7 1462 aa28.54■■■□□ 2.16
SPC24-207ENST00000592967 POLA1P09884 1462 aaPredicted RBP28.5■■■□□ 2.15
SPC24-207ENST00000592967 SOGA1O94964 1423 aa28.45■■■□□ 2.15
SPC24-207ENST00000592967 ZNF608Q9ULD9 1512 aaPredicted RBP28.45■■■□□ 2.15
SPC24-207ENST00000592967 FGD5Q6ZNL6 1462 aa28.45■■■□□ 2.14
SPC24-207ENST00000592967 RAD54L2Q9Y4B4 1467 aa28.44■■■□□ 2.14
SPC24-207ENST00000592967 WRNQ14191 1432 aaPredicted RBP eCLIP28.4■■■□□ 2.14
SPC24-207ENST00000592967 TARBP1Q13395 1621 aaKnown RBP28.4■■■□□ 2.14
SPC24-207ENST00000592967 DNAJC5Q9H3Z4 198 aa28.38■■■□□ 2.13
SPC24-207ENST00000592967 AQRO60306 1485 aaKnown RBP eCLIP28.34■■■□□ 2.134e-7■□□□□ 8.6
SPC24-207ENST00000592967 TDRD9Q8NDG6 1382 aaKnown RBP28.31■■■□□ 2.12
SPC24-207ENST00000592967 SYNJ1O43426 1573 aa28.29■■■□□ 2.12
SPC24-207ENST00000592967 TOP2BQ02880 1626 aa28.28■■■□□ 2.12
SPC24-207ENST00000592967 BIVM-ERCC5R4GMW8 1640 aa28.25■■■□□ 2.11
SPC24-207ENST00000592967 EIF4G3O43432 1585 aaKnown RBP28.24■■■□□ 2.11
SPC24-207ENST00000592967 ABCA10Q8WWZ4 1543 aa28.16■■■□□ 2.1
SPC24-207ENST00000592967 OSCARQ8IYS5 282 aa28.13■■■□□ 2.09
SPC24-207ENST00000592967 WDR97A6NE52 1622 aa28.11■■■□□ 2.09
SPC24-207ENST00000592967 GAPVD1Q14C86 1478 aa28.08■■■□□ 2.09
SPC24-207ENST00000592967 GRIN2BQ13224 1484 aa28.05■■■□□ 2.08
SPC24-207ENST00000592967 FBLN2P98095 1184 aa28.04■■■□□ 2.08
SPC24-207ENST00000592967 SNAPC4Q5SXM2 1469 aa28.01■■■□□ 2.07
SPC24-207ENST00000592967 ABCA5Q8WWZ7 1642 aa28■■■□□ 2.07
SPC24-207ENST00000592967 CHMP7Q8WUX9 453 aaPredicted RBP27.95■■■□□ 2.06
SPC24-207ENST00000592967 MAGI1Q96QZ7 1491 aaPredicted RBP27.94■■■□□ 2.06
SPC24-207ENST00000592967 PBRM1Q86U86 1689 aa27.92■■■□□ 2.06
SPC24-207ENST00000592967 CHD1O14646 1710 aa27.89■■■□□ 2.05
SPC24-207ENST00000592967 TRIM41Q8WV44 630 aa27.86■■■□□ 2.05
SPC24-207ENST00000592967 SYNJ2O15056 1496 aa27.85■■■□□ 2.05
SPC24-207ENST00000592967 KIF27Q86VH2 1401 aa27.81■■■□□ 2.04
SPC24-207ENST00000592967 ERICH3Q5RHP9 1530 aa27.8■■■□□ 2.04
SPC24-207ENST00000592967 FHAD1B1AJZ9 1412 aa27.75■■■□□ 2.03
SPC24-207ENST00000592967 IGF1RP08069 1367 aa27.75■■■□□ 2.03
SPC24-207ENST00000592967 ADAMTS12P58397 1594 aa27.73■■■□□ 2.03
SPC24-207ENST00000592967 GRIN2AQ12879 1464 aa27.69■■■□□ 2.02
SPC24-207ENST00000592967 RUSC2Q8N2Y8 1516 aa27.63■■■□□ 2.01
SPC24-207ENST00000592967 CLASP1Q7Z460 1538 aa27.61■■■□□ 2.01
SPC24-207ENST00000592967 CHIC1Q5VXU3 224 aa27.57■■■□□ 2
SPC24-207ENST00000592967 CARMIL1Q5VZK9 1371 aa27.57■■■□□ 2
SPC24-207ENST00000592967 NUP160Q12769 1436 aa27.57■■■□□ 2
SPC24-207ENST00000592967 ARHGEF11O15085 1522 aa27.56■■■□□ 2
SPC24-207ENST00000592967 RIMBP3CA6NJZ7 1639 aa27.54■■■□□ 2
SPC24-207ENST00000592967 RIMBP3BA6NNM3 1639 aa27.54■■■□□ 2
SPC24-207ENST00000592967 RIMBP3Q9UFD9 1639 aa27.54■■■□□ 2
SPC24-207ENST00000592967 CEP170Q5SW79 1584 aa27.53■■■□□ 2
SPC24-207ENST00000592967 CUL7Q14999 1698 aa27.51■■□□□ 1.99
SPC24-207ENST00000592967 CYB5RLQ6IPT4 315 aa27.44■■□□□ 1.98
SPC24-207ENST00000592967 JPH4Q96JJ6 628 aa27.4■■□□□ 1.98
SPC24-207ENST00000592967 RAPGEF2Q9Y4G8 1499 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms