RNA–Protein interactions for RNA: ENST00000592960.1

PKN1-215, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-215ENST00000592960 NISCHQ9Y2I1 1504 aa37.43■■■■□ 3.58
PKN1-215ENST00000592960 ABCC9O60706 1549 aa33.97■■■■□ 3.03
PKN1-215ENST00000592960 CCDC180Q9P1Z9 1646 aa33.64■■■□□ 2.98
PKN1-215ENST00000592960 DNAJC5BQ9UF47 199 aa32.29■■■□□ 2.76
PKN1-215ENST00000592960 RB1CC1Q8TDY2 1594 aa32.21■■■□□ 2.75
PKN1-215ENST00000592960 NACADO15069 1562 aa31.96■■■□□ 2.71
PKN1-215ENST00000592960 DCAF8L2P0C7V8 631 aa31.71■■■□□ 2.67
PKN1-215ENST00000592960 PABPN1Q86U42 306 aaKnown RBP eCLIP31.64■■■□□ 2.66
PKN1-215ENST00000592960 MYO15BQ96JP2 1530 aa31.49■■■□□ 2.63
PKN1-215ENST00000592960 UNC13AQ9UPW8 1703 aa31.4■■■□□ 2.62
PKN1-215ENST00000592960 BICRAQ9NZM4 1560 aa31.31■■■□□ 2.6
PKN1-215ENST00000592960 DCAF1Q9Y4B6 1507 aa30.94■■■□□ 2.54
PKN1-215ENST00000592960 ZCCHC6Q5VYS8 1495 aaKnown RBP30.93■■■□□ 2.54
PKN1-215ENST00000592960 SHROOM4Q9ULL8 1493 aa30.91■■■□□ 2.54
PKN1-215ENST00000592960 CECR2Q9BXF3 1484 aa30.68■■■□□ 2.5
PKN1-215ENST00000592960 CC2D2AQ9P2K1 1620 aa30.67■■■□□ 2.5
PKN1-215ENST00000592960 SCRIBQ14160 1630 aa30.58■■■□□ 2.49
PKN1-215ENST00000592960 EIF4G1Q04637 1599 aaKnown RBP30.54■■■□□ 2.48
PKN1-215ENST00000592960 DNAJC5Q9H3Z4 198 aa29.92■■■□□ 2.38
PKN1-215ENST00000592960 NCAPD3P42695 1498 aa29.58■■■□□ 2.33
PKN1-215ENST00000592960 CUX2O14529 1486 aa29.47■■■□□ 2.31
PKN1-215ENST00000592960 ATAD2BQ9ULI0 1458 aa29.39■■■□□ 2.3
PKN1-215ENST00000592960 ERCC6Q03468 1493 aa29.35■■■□□ 2.29
PKN1-215ENST00000592960 SMARCA2P51531 1590 aa29.26■■■□□ 2.27
PKN1-215ENST00000592960 HMGXB3Q12766 1538 aa29.24■■■□□ 2.27
PKN1-215ENST00000592960 SMARCA4P51532 1647 aa29.2■■■□□ 2.27
PKN1-215ENST00000592960 NESP48681 1621 aa29.11■■■□□ 2.25
PKN1-215ENST00000592960 BAZ1AQ9NRL2 1556 aaPredicted RBP29.05■■■□□ 2.24
PKN1-215ENST00000592960 BAZ1BQ9UIG0 1483 aaKnown RBP29.03■■■□□ 2.24
PKN1-215ENST00000592960 PEG3Q9GZU2 1588 aa28.99■■■□□ 2.23
PKN1-215ENST00000592960 LAMC3Q9Y6N6 1575 aa28.87■■■□□ 2.21
PKN1-215ENST00000592960 THOC2Q8NI27 1593 aaKnown RBP28.84■■■□□ 2.21
PKN1-215ENST00000592960 MROH2BQ7Z745 1585 aa28.81■■■□□ 2.2
PKN1-215ENST00000592960 PDS5BQ9NTI5 1447 aa28.77■■■□□ 2.2
PKN1-215ENST00000592960 CADPSQ9ULU8 1353 aa28.64■■■□□ 2.18
PKN1-215ENST00000592960 KIF21AQ7Z4S6 1674 aa28.64■■■□□ 2.17
PKN1-215ENST00000592960 MRC2Q9UBG0 1479 aa28.48■■■□□ 2.15
PKN1-215ENST00000592960 WDR62O43379 1518 aa28.43■■■□□ 2.14
PKN1-215ENST00000592960 WIZO95785 1651 aa28.38■■■□□ 2.13
PKN1-215ENST00000592960 TRIM41Q8WV44 630 aa28.33■■■□□ 2.13
PKN1-215ENST00000592960 CEP164Q9UPV0 1460 aa28.29■■■□□ 2.12
PKN1-215ENST00000592960 FANCD2Q9BXW9 1451 aa28.26■■■□□ 2.11
PKN1-215ENST00000592960 CFTRP13569 1480 aa28.24■■■□□ 2.11
PKN1-215ENST00000592960 RSF1Q96T23 1441 aaPredicted RBP28.16■■■□□ 2.1
PKN1-215ENST00000592960 OSCARQ8IYS5 282 aa28.15■■■□□ 2.1
PKN1-215ENST00000592960 TOP2AP11388 1531 aaKnown RBP28.05■■■□□ 2.08
PKN1-215ENST00000592960 URB2Q14146 1524 aaKnown RBP28.04■■■□□ 2.08
PKN1-215ENST00000592960 CCDC88BA6NC98 1476 aa27.78■■■□□ 2.04
PKN1-215ENST00000592960 IFT140Q96RY7 1462 aa27.78■■■□□ 2.04
PKN1-215ENST00000592960 PRDM2Q13029 1718 aa27.75■■■□□ 2.03
PKN1-215ENST00000592960 ZNF608Q9ULD9 1512 aaPredicted RBP27.74■■■□□ 2.03
PKN1-215ENST00000592960 TOPBP1Q92547 1522 aa27.68■■■□□ 2.02
PKN1-215ENST00000592960 RIMBP3CA6NJZ7 1639 aa27.67■■■□□ 2.02
PKN1-215ENST00000592960 RIMBP3BA6NNM3 1639 aa27.67■■■□□ 2.02
PKN1-215ENST00000592960 RIMBP3Q9UFD9 1639 aa27.67■■■□□ 2.02
PKN1-215ENST00000592960 ABCC8Q09428 1581 aa27.66■■■□□ 2.02
PKN1-215ENST00000592960 ARHGEF11O15085 1522 aa27.58■■■□□ 2.01
PKN1-215ENST00000592960 DNMBPQ6XZF7 1577 aa27.52■■■□□ 2
PKN1-215ENST00000592960 EIF4G3O43432 1585 aaKnown RBP27.5■■□□□ 1.99
PKN1-215ENST00000592960 AQRO60306 1485 aaKnown RBP eCLIP27.47■■□□□ 1.992e-12■■■■■ 52
PKN1-215ENST00000592960 CYB5RLQ6IPT4 315 aa27.47■■□□□ 1.99
PKN1-215ENST00000592960 TARBP1Q13395 1621 aaKnown RBP27.45■■□□□ 1.99
PKN1-215ENST00000592960 POLA1P09884 1462 aaPredicted RBP27.38■■□□□ 1.97
PKN1-215ENST00000592960 FBLN2P98095 1184 aa27.34■■□□□ 1.97
PKN1-215ENST00000592960 CHD1O14646 1710 aa27.33■■□□□ 1.96
PKN1-215ENST00000592960 ARAP1Q96P48 1450 aa27.3■■□□□ 1.96
PKN1-215ENST00000592960 SOGA1O94964 1423 aa27.29■■□□□ 1.96
PKN1-215ENST00000592960 RAD54L2Q9Y4B4 1467 aa27.28■■□□□ 1.96
PKN1-215ENST00000592960 TDRD9Q8NDG6 1382 aaKnown RBP27.26■■□□□ 1.95
PKN1-215ENST00000592960 TRHP20396 242 aaPredicted RBP27.22■■□□□ 1.95
PKN1-215ENST00000592960 WDR97A6NE52 1622 aa27.16■■□□□ 1.94
PKN1-215ENST00000592960 CHMP7Q8WUX9 453 aaPredicted RBP27.14■■□□□ 1.94
PKN1-215ENST00000592960 SNAPC4Q5SXM2 1469 aa27.13■■□□□ 1.93
PKN1-215ENST00000592960 FGD5Q6ZNL6 1462 aa27.13■■□□□ 1.93
PKN1-215ENST00000592960 CLASP1Q7Z460 1538 aa27.11■■□□□ 1.93
PKN1-215ENST00000592960 MAGI1Q96QZ7 1491 aaPredicted RBP27.1■■□□□ 1.93
PKN1-215ENST00000592960 CUX1P39880 1505 aa27.08■■□□□ 1.93
PKN1-215ENST00000592960 GRIN2BQ13224 1484 aa27.07■■□□□ 1.92
PKN1-215ENST00000592960 SYNJ1O43426 1573 aa27.03■■□□□ 1.92
PKN1-215ENST00000592960 SYNJ2O15056 1496 aa27.01■■□□□ 1.91
PKN1-215ENST00000592960 GAPVD1Q14C86 1478 aa26.93■■□□□ 1.9
PKN1-215ENST00000592960 ABCA10Q8WWZ4 1543 aa26.86■■□□□ 1.89
PKN1-215ENST00000592960 PBRM1Q86U86 1689 aa26.8■■□□□ 1.88
PKN1-215ENST00000592960 ABCA5Q8WWZ7 1642 aa26.78■■□□□ 1.88
PKN1-215ENST00000592960 WRNQ14191 1432 aaPredicted RBP eCLIP26.71■■□□□ 1.87
PKN1-215ENST00000592960 GRIN2AQ12879 1464 aa26.7■■□□□ 1.87
PKN1-215ENST00000592960 NUP160Q12769 1436 aa26.66■■□□□ 1.86
PKN1-215ENST00000592960 AEBP2Q6ZN18 517 aaPredicted RBP26.66■■□□□ 1.86
PKN1-215ENST00000592960 ERCC6L2Q5T890 1561 aa26.63■■□□□ 1.85
PKN1-215ENST00000592960 SUPT5HO00267 1087 aaKnown RBP26.61■■□□□ 1.85
PKN1-215ENST00000592960 ADAMTS12P58397 1594 aa26.59■■□□□ 1.85
PKN1-215ENST00000592960 FHAD1B1AJZ9 1412 aa26.59■■□□□ 1.85
PKN1-215ENST00000592960 CEP170Q5SW79 1584 aa26.58■■□□□ 1.85
PKN1-215ENST00000592960 TOP2BQ02880 1626 aa26.55■■□□□ 1.84
PKN1-215ENST00000592960 SHROOM2Q13796 1616 aa26.53■■□□□ 1.84
PKN1-215ENST00000592960 BIVM-ERCC5R4GMW8 1640 aa26.52■■□□□ 1.84
PKN1-215ENST00000592960 ERICH3Q5RHP9 1530 aa26.5■■□□□ 1.83
PKN1-215ENST00000592960 JPH4Q96JJ6 628 aa26.45■■□□□ 1.82
PKN1-215ENST00000592960 PRG4Q92954 1404 aaPredicted RBP26.41■■□□□ 1.82
PKN1-215ENST00000592960 KIF13AQ9H1H9 1805 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms