RNA–Protein interactions for RNA: ENST00000592761.2

TIMP2-205, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

TSL 1 (best)

Gene TIMP2, Length 2,433 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-205ENST00000592761 NISCHQ9Y2I1 1504 aa26.9■■□□□ 1.9
TIMP2-205ENST00000592761 CCDC180Q9P1Z9 1646 aa23.81■■□□□ 1.4
TIMP2-205ENST00000592761 SHROOM4Q9ULL8 1493 aa23.3■■□□□ 1.32
TIMP2-205ENST00000592761 ABCC9O60706 1549 aa23.17■■□□□ 1.3
TIMP2-205ENST00000592761 SUPT5HO00267 1087 aaKnown RBP23■■□□□ 1.27
TIMP2-205ENST00000592761 ZCCHC6Q5VYS8 1495 aaKnown RBP22.83■■□□□ 1.25
TIMP2-205ENST00000592761 MYO15BQ96JP2 1530 aa22.66■■□□□ 1.22
TIMP2-205ENST00000592761 CHIC1Q5VXU3 224 aa22.56■■□□□ 1.2
TIMP2-205ENST00000592761 HRCP23327 699 aa22.55■■□□□ 1.2
TIMP2-205ENST00000592761 DCAF8L2P0C7V8 631 aa22.54■■□□□ 1.2
TIMP2-205ENST00000592761 RB1CC1Q8TDY2 1594 aa22.46■■□□□ 1.19
TIMP2-205ENST00000592761 NACADO15069 1562 aa22.4■■□□□ 1.18
TIMP2-205ENST00000592761 PCGF6Q9BYE7 350 aa22.27■■□□□ 1.16
TIMP2-205ENST00000592761 PPARGC1BQ86YN6 1023 aaKnown RBP22.09■■□□□ 1.13
TIMP2-205ENST00000592761 DCAF1Q9Y4B6 1507 aa22.05■■□□□ 1.12
TIMP2-205ENST00000592761 LOC105371045A0A1W2PR82 267 aa21.96■■□□□ 1.11
TIMP2-205ENST00000592761 UNC13AQ9UPW8 1703 aa21.79■■□□□ 1.08
TIMP2-205ENST00000592761 TRIM26Q12899 539 aaPredicted RBP21.7■■□□□ 1.06
TIMP2-205ENST00000592761 BICRAQ9NZM4 1560 aa21.63■■□□□ 1.05
TIMP2-205ENST00000592761 PABPN1Q86U42 306 aaKnown RBP eCLIP21.48■■□□□ 1.03
TIMP2-205ENST00000592761 SCRIBQ14160 1630 aa21.47■■□□□ 1.03
TIMP2-205ENST00000592761 RSF1Q96T23 1441 aaPredicted RBP21.47■■□□□ 1.03
TIMP2-205ENST00000592761 TRIM41Q8WV44 630 aa21.34■■□□□ 1.01
TIMP2-205ENST00000592761 ZEB1P37275 1124 aaPredicted RBP21.34■■□□□ 1.01
TIMP2-205ENST00000592761 DNAJC5BQ9UF47 199 aa21.33■■□□□ 1.01
TIMP2-205ENST00000592761 FAM9AQ8IZU1 332 aaPredicted RBP21.26■□□□□ 0.99
TIMP2-205ENST00000592761 EIF4G1Q04637 1599 aaKnown RBP21.12■□□□□ 0.97
TIMP2-205ENST00000592761 EHMT2Q96KQ7 1210 aa21.1■□□□□ 0.97
TIMP2-205ENST00000592761 SCAF1Q9H7N4 1312 aaKnown RBP21.07■□□□□ 0.96
TIMP2-205ENST00000592761 CC2D2AQ9P2K1 1620 aa21.07■□□□□ 0.96
TIMP2-205ENST00000592761 CECR2Q9BXF3 1484 aa21.03■□□□□ 0.96
TIMP2-205ENST00000592761 MROH2BQ7Z745 1585 aa20.98■□□□□ 0.95
TIMP2-205ENST00000592761 PELP1Q8IZL8 1130 aaKnown RBP20.95■□□□□ 0.94
TIMP2-205ENST00000592761 WIZO95785 1651 aa20.91■□□□□ 0.94
TIMP2-205ENST00000592761 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.82■□□□□ 0.92
TIMP2-205ENST00000592761 BAZ1AQ9NRL2 1556 aaPredicted RBP20.75■□□□□ 0.91
TIMP2-205ENST00000592761 CCER1Q8TC90 406 aaPredicted RBP20.73■□□□□ 0.91
TIMP2-205ENST00000592761 ACIN1Q9UKV3 1341 aaKnown RBP20.68■□□□□ 0.9
TIMP2-205ENST00000592761 NEUROD1Q13562 356 aa20.66■□□□□ 0.9
TIMP2-205ENST00000592761 NCAPD3P42695 1498 aa20.6■□□□□ 0.89
TIMP2-205ENST00000592761 SMARCA2P51531 1590 aa20.59■□□□□ 0.89
TIMP2-205ENST00000592761 ABCC8Q09428 1581 aa20.59■□□□□ 0.89
TIMP2-205ENST00000592761 WRNQ14191 1432 aaPredicted RBP eCLIP20.59■□□□□ 0.89
TIMP2-205ENST00000592761 SMARCA4P51532 1647 aa20.57■□□□□ 0.88
TIMP2-205ENST00000592761 CCDC88BA6NC98 1476 aa20.57■□□□□ 0.88
TIMP2-205ENST00000592761 DIEXFQ68CQ4 756 aaKnown RBP20.56■□□□□ 0.88
TIMP2-205ENST00000592761 HMGXB3Q12766 1538 aa20.54■□□□□ 0.88
TIMP2-205ENST00000592761 TTBK1Q5TCY1 1321 aaPredicted RBP20.52■□□□□ 0.88
TIMP2-205ENST00000592761 CEP162Q5TB80 1403 aa20.52■□□□□ 0.88
TIMP2-205ENST00000592761 TOP2AP11388 1531 aaKnown RBP20.51■□□□□ 0.87
TIMP2-205ENST00000592761 ATAD2BQ9ULI0 1458 aa20.49■□□□□ 0.87
TIMP2-205ENST00000592761 PEG3Q9GZU2 1588 aa20.49■□□□□ 0.87
TIMP2-205ENST00000592761 GTF3C3Q9Y5Q9 886 aa20.47■□□□□ 0.87
TIMP2-205ENST00000592761 SOGA1O94964 1423 aa20.46■□□□□ 0.87
TIMP2-205ENST00000592761 TNIKQ9UKE5 1360 aa20.43■□□□□ 0.86
TIMP2-205ENST00000592761 CENPBP07199 599 aaPredicted RBP20.42■□□□□ 0.86
TIMP2-205ENST00000592761 RUSC2Q8N2Y8 1516 aa20.37■□□□□ 0.85
TIMP2-205ENST00000592761 BAZ1BQ9UIG0 1483 aaKnown RBP20.33■□□□□ 0.84
TIMP2-205ENST00000592761 CSRNP3Q8WYN3 585 aa20.32■□□□□ 0.84
TIMP2-205ENST00000592761 EEA1Q15075 1411 aa20.3■□□□□ 0.84
TIMP2-205ENST00000592761 ZNF316A6NFI3 1004 aaPredicted RBP20.29■□□□□ 0.84
TIMP2-205ENST00000592761 UBTFP17480 764 aaKnown RBP20.27■□□□□ 0.84
TIMP2-205ENST00000592761 GOLGA3Q08378 1498 aa20.23■□□□□ 0.83
TIMP2-205ENST00000592761 CUX2O14529 1486 aa20.17■□□□□ 0.82
TIMP2-205ENST00000592761 LAMC3Q9Y6N6 1575 aa20.16■□□□□ 0.82
TIMP2-205ENST00000592761 YTHDC1Q96MU7 727 aaKnown RBP20.13■□□□□ 0.81
TIMP2-205ENST00000592761 ERCC6Q03468 1493 aa20.12■□□□□ 0.81
TIMP2-205ENST00000592761 MIER1Q8N108 512 aa20.12■□□□□ 0.81
TIMP2-205ENST00000592761 HNRNPUL2Q1KMD3 747 aaKnown RBP20.11■□□□□ 0.81
TIMP2-205ENST00000592761 KIF21BO75037 1637 aa20.08■□□□□ 0.8
TIMP2-205ENST00000592761 SYNJ1O43426 1573 aa20.07■□□□□ 0.8
TIMP2-205ENST00000592761 CEP164Q9UPV0 1460 aa20.07■□□□□ 0.8
TIMP2-205ENST00000592761 CLIP1P30622 1438 aa20.04■□□□□ 0.8
TIMP2-205ENST00000592761 VPS8Q8N3P4 1428 aa20■□□□□ 0.79
TIMP2-205ENST00000592761 PDS5BQ9NTI5 1447 aa19.99■□□□□ 0.79
TIMP2-205ENST00000592761 MYT1Q01538 1121 aa19.95■□□□□ 0.78
TIMP2-205ENST00000592761 NESP48681 1621 aa19.93■□□□□ 0.78
TIMP2-205ENST00000592761 RAPGEF2Q9Y4G8 1499 aa19.93■□□□□ 0.78
TIMP2-205ENST00000592761 CADPSQ9ULU8 1353 aa19.93■□□□□ 0.78
TIMP2-205ENST00000592761 THOC2Q8NI27 1593 aaKnown RBP19.89■□□□□ 0.78
TIMP2-205ENST00000592761 APLP2Q06481 763 aa19.84■□□□□ 0.77
TIMP2-205ENST00000592761 RANGAP1P46060 587 aaPredicted RBP19.83■□□□□ 0.76
TIMP2-205ENST00000592761 KIF21AQ7Z4S6 1674 aa19.83■□□□□ 0.76
TIMP2-205ENST00000592761 DHX57Q6P158 1386 aaKnown RBP19.78■□□□□ 0.76
TIMP2-205ENST00000592761 CFTRP13569 1480 aa19.78■□□□□ 0.76
TIMP2-205ENST00000592761 MRC2Q9UBG0 1479 aa19.77■□□□□ 0.76
TIMP2-205ENST00000592761 PRDM2Q13029 1718 aa19.74■□□□□ 0.75
TIMP2-205ENST00000592761 TOP2BQ02880 1626 aa19.74■□□□□ 0.75
TIMP2-205ENST00000592761 WDR62O43379 1518 aa19.73■□□□□ 0.75
TIMP2-205ENST00000592761 CLSPNQ9HAW4 1339 aa19.73■□□□□ 0.75
TIMP2-205ENST00000592761 ARAP1Q96P48 1450 aa19.71■□□□□ 0.75
TIMP2-205ENST00000592761 KANK4Q5T7N3 995 aaPredicted RBP19.68■□□□□ 0.74
TIMP2-205ENST00000592761 FANCD2Q9BXW9 1451 aa19.67■□□□□ 0.74
TIMP2-205ENST00000592761 BIVM-ERCC5R4GMW8 1640 aa19.67■□□□□ 0.74
TIMP2-205ENST00000592761 ERICH3Q5RHP9 1530 aa19.66■□□□□ 0.74
TIMP2-205ENST00000592761 PRXQ9BXM0 1461 aa19.66■□□□□ 0.74
TIMP2-205ENST00000592761 DNAJC5Q9H3Z4 198 aa19.64■□□□□ 0.74
TIMP2-205ENST00000592761 SUPT16HQ9Y5B9 1047 aaKnown RBP19.62■□□□□ 0.73
TIMP2-205ENST00000592761 RRBP1Q9P2E9 1410 aaKnown RBP19.6■□□□□ 0.73
TIMP2-205ENST00000592761 CUX1P39880 1505 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms