RNA–Protein interactions for RNA: ENST00000592662.5

FARSA-209, Transcript of phenylalanyl-tRNA synthetase subunit alpha, humanhuman

TSL 1 (best)

Gene FARSA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARSA-209ENST00000592662 NISCHQ9Y2I1 1504 aa47.44■■■■■ 5.18
FARSA-209ENST00000592662 CCDC180Q9P1Z9 1646 aa42.38■■■■■ 4.38
FARSA-209ENST00000592662 ABCC9O60706 1549 aa41.92■■■■■ 4.3
FARSA-209ENST00000592662 RB1CC1Q8TDY2 1594 aa40.1■■■■■ 4.01
FARSA-209ENST00000592662 NACADO15069 1562 aa39.96■■■■□ 3.99
FARSA-209ENST00000592662 DCAF8L2P0C7V8 631 aa39.74■■■■□ 3.95
FARSA-209ENST00000592662 MYO15BQ96JP2 1530 aa39.59■■■■□ 3.93
FARSA-209ENST00000592662 ZCCHC6Q5VYS8 1495 aaKnown RBP39.42■■■■□ 3.9
FARSA-209ENST00000592662 UNC13AQ9UPW8 1703 aa39.26■■■■□ 3.88
FARSA-209ENST00000592662 DCAF1Q9Y4B6 1507 aa39.24■■■■□ 3.87
FARSA-209ENST00000592662 PABPN1Q86U42 306 aaKnown RBP eCLIP39.09■■■■□ 3.85
FARSA-209ENST00000592662 DNAJC5BQ9UF47 199 aa38.98■■■■□ 3.83
FARSA-209ENST00000592662 BICRAQ9NZM4 1560 aa38.98■■■■□ 3.83
FARSA-209ENST00000592662 SCRIBQ14160 1630 aa38.62■■■■□ 3.77
FARSA-209ENST00000592662 SHROOM4Q9ULL8 1493 aa38.47■■■■□ 3.75
FARSA-209ENST00000592662 EIF4G1Q04637 1599 aaKnown RBP37.96■■■■□ 3.67
FARSA-209ENST00000592662 CC2D2AQ9P2K1 1620 aa37.92■■■■□ 3.66
FARSA-209ENST00000592662 CECR2Q9BXF3 1484 aa37.72■■■■□ 3.63
FARSA-209ENST00000592662 SMARCA4P51532 1647 aa36.91■■■■□ 3.5
FARSA-209ENST00000592662 NCAPD3P42695 1498 aa36.89■■■■□ 3.5
FARSA-209ENST00000592662 ATAD2BQ9ULI0 1458 aa36.84■■■■□ 3.49
FARSA-209ENST00000592662 BAZ1AQ9NRL2 1556 aaPredicted RBP36.78■■■■□ 3.48
FARSA-209ENST00000592662 SMARCA2P51531 1590 aa36.74■■■■□ 3.47
FARSA-209ENST00000592662 HMGXB3Q12766 1538 aa36.66■■■■□ 3.46
FARSA-209ENST00000592662 PEG3Q9GZU2 1588 aa36.58■■■■□ 3.45
FARSA-209ENST00000592662 MROH2BQ7Z745 1585 aa36.56■■■■□ 3.44
FARSA-209ENST00000592662 BAZ1BQ9UIG0 1483 aaKnown RBP36.48■■■■□ 3.43
FARSA-209ENST00000592662 NESP48681 1621 aa36.16■■■■□ 3.38
FARSA-209ENST00000592662 WIZO95785 1651 aa36.13■■■■□ 3.37
FARSA-209ENST00000592662 ERCC6Q03468 1493 aa36.13■■■■□ 3.37
FARSA-209ENST00000592662 LAMC3Q9Y6N6 1575 aa35.98■■■■□ 3.35
FARSA-209ENST00000592662 CUX2O14529 1486 aa35.97■■■■□ 3.35
FARSA-209ENST00000592662 RSF1Q96T23 1441 aaPredicted RBP35.96■■■■□ 3.35
FARSA-209ENST00000592662 CADPSQ9ULU8 1353 aa35.77■■■■□ 3.32
FARSA-209ENST00000592662 THOC2Q8NI27 1593 aaKnown RBP35.73■■■■□ 3.31
FARSA-209ENST00000592662 PDS5BQ9NTI5 1447 aa35.73■■■■□ 3.31
FARSA-209ENST00000592662 KIF21AQ7Z4S6 1674 aa35.72■■■■□ 3.31
FARSA-209ENST00000592662 TOP2AP11388 1531 aaKnown RBP35.71■■■■□ 3.31
FARSA-209ENST00000592662 CFTRP13569 1480 aa35.48■■■■□ 3.27
FARSA-209ENST00000592662 DNAJC5Q9H3Z4 198 aa35.45■■■■□ 3.27
FARSA-209ENST00000592662 MRC2Q9UBG0 1479 aa35.41■■■■□ 3.26
FARSA-209ENST00000592662 FANCD2Q9BXW9 1451 aa35.36■■■■□ 3.25
FARSA-209ENST00000592662 CEP164Q9UPV0 1460 aa35.35■■■■□ 3.25
FARSA-209ENST00000592662 WDR62O43379 1518 aa35.33■■■■□ 3.25
FARSA-209ENST00000592662 CCDC88BA6NC98 1476 aa35.29■■■■□ 3.24
FARSA-209ENST00000592662 PRDM2Q13029 1718 aa35.17■■■■□ 3.22
FARSA-209ENST00000592662 URB2Q14146 1524 aaKnown RBP35.06■■■■□ 3.2
FARSA-209ENST00000592662 TOPBP1Q92547 1522 aa34.76■■■■□ 3.15
FARSA-209ENST00000592662 ABCC8Q09428 1581 aa34.69■■■■□ 3.14
FARSA-209ENST00000592662 DNMBPQ6XZF7 1577 aa34.66■■■■□ 3.14
FARSA-209ENST00000592662 IFT140Q96RY7 1462 aa34.64■■■■□ 3.14
FARSA-209ENST00000592662 SUPT5HO00267 1087 aaKnown RBP34.61■■■■□ 3.13
FARSA-209ENST00000592662 ZNF608Q9ULD9 1512 aaPredicted RBP34.55■■■■□ 3.12
FARSA-209ENST00000592662 TARBP1Q13395 1621 aaKnown RBP34.44■■■■□ 3.1
FARSA-209ENST00000592662 POLA1P09884 1462 aaPredicted RBP34.43■■■■□ 3.1
FARSA-209ENST00000592662 EIF4G3O43432 1585 aaKnown RBP34.39■■■■□ 3.1
FARSA-209ENST00000592662 OSCARQ8IYS5 282 aa34.37■■■■□ 3.09
FARSA-209ENST00000592662 CUX1P39880 1505 aa34.32■■■■□ 3.08
FARSA-209ENST00000592662 AQRO60306 1485 aaKnown RBP eCLIP34.28■■■■□ 3.083e-7■■■□□ 17.9
FARSA-209ENST00000592662 RAD54L2Q9Y4B4 1467 aa34.28■■■■□ 3.08
FARSA-209ENST00000592662 FGD5Q6ZNL6 1462 aa34.27■■■■□ 3.08
FARSA-209ENST00000592662 SOGA1O94964 1423 aa34.25■■■■□ 3.07
FARSA-209ENST00000592662 TDRD9Q8NDG6 1382 aaKnown RBP34.13■■■■□ 3.05
FARSA-209ENST00000592662 WDR97A6NE52 1622 aa34.11■■■■□ 3.05
FARSA-209ENST00000592662 CHD1O14646 1710 aa34.04■■■■□ 3.04
FARSA-209ENST00000592662 TRIM41Q8WV44 630 aa34.01■■■■□ 3.03
FARSA-209ENST00000592662 SNAPC4Q5SXM2 1469 aa33.95■■■■□ 3.02
FARSA-209ENST00000592662 ABCA10Q8WWZ4 1543 aa33.92■■■■□ 3.02
FARSA-209ENST00000592662 RIMBP3CA6NJZ7 1639 aa33.91■■■■□ 3.02
FARSA-209ENST00000592662 RIMBP3BA6NNM3 1639 aa33.91■■■■□ 3.02
FARSA-209ENST00000592662 RIMBP3Q9UFD9 1639 aa33.91■■■■□ 3.02
FARSA-209ENST00000592662 GRIN2BQ13224 1484 aa33.91■■■■□ 3.02
FARSA-209ENST00000592662 FBLN2P98095 1184 aa33.9■■■■□ 3.02
FARSA-209ENST00000592662 BIVM-ERCC5R4GMW8 1640 aa33.9■■■■□ 3.02
FARSA-209ENST00000592662 WRNQ14191 1432 aaPredicted RBP eCLIP33.89■■■■□ 3.02
FARSA-209ENST00000592662 TOP2BQ02880 1626 aa33.89■■■■□ 3.02
FARSA-209ENST00000592662 MAGI1Q96QZ7 1491 aaPredicted RBP33.88■■■■□ 3.01
FARSA-209ENST00000592662 SYNJ1O43426 1573 aa33.86■■■■□ 3.01
FARSA-209ENST00000592662 ARHGEF11O15085 1522 aa33.85■■■■□ 3.01
FARSA-209ENST00000592662 GAPVD1Q14C86 1478 aa33.85■■■■□ 3.01
FARSA-209ENST00000592662 ABCA5Q8WWZ7 1642 aa33.84■■■■□ 3.01
FARSA-209ENST00000592662 PBRM1Q86U86 1689 aa33.83■■■■□ 3.01
FARSA-209ENST00000592662 SYNJ2O15056 1496 aa33.76■■■■□ 3
FARSA-209ENST00000592662 CHMP7Q8WUX9 453 aaPredicted RBP33.75■■■□□ 2.99
FARSA-209ENST00000592662 CLASP1Q7Z460 1538 aa33.69■■■□□ 2.98
FARSA-209ENST00000592662 ARAP1Q96P48 1450 aa33.56■■■□□ 2.96
FARSA-209ENST00000592662 ADAMTS12P58397 1594 aa33.54■■■□□ 2.96
FARSA-209ENST00000592662 CYB5RLQ6IPT4 315 aa33.52■■■□□ 2.96
FARSA-209ENST00000592662 ERICH3Q5RHP9 1530 aa33.49■■■□□ 2.95
FARSA-209ENST00000592662 GRIN2AQ12879 1464 aa33.49■■■□□ 2.95
FARSA-209ENST00000592662 FHAD1B1AJZ9 1412 aa33.45■■■□□ 2.94
FARSA-209ENST00000592662 NUP160Q12769 1436 aa33.38■■■□□ 2.93
FARSA-209ENST00000592662 CEP170Q5SW79 1584 aa33.37■■■□□ 2.93
FARSA-209ENST00000592662 KIF27Q86VH2 1401 aa33.2■■■□□ 2.91
FARSA-209ENST00000592662 SHROOM2Q13796 1616 aa33.2■■■□□ 2.9
FARSA-209ENST00000592662 ERCC6L2Q5T890 1561 aa33.19■■■□□ 2.9
FARSA-209ENST00000592662 IGF1RP08069 1367 aa33.17■■■□□ 2.9
FARSA-209ENST00000592662 CUL7Q14999 1698 aa33.08■■■□□ 2.89
FARSA-209ENST00000592662 RUSC2Q8N2Y8 1516 aa33.07■■■□□ 2.88
FARSA-209ENST00000592662 JPH4Q96JJ6 628 aa33■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms