RNA–Protein interactions for RNA: ENST00000592621.5

RANBP3-228, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-228ENST00000592621 NISCHQ9Y2I1 1504 aa28.33■■■□□ 2.13
RANBP3-228ENST00000592621 CCDC180Q9P1Z9 1646 aa25.12■■□□□ 1.61
RANBP3-228ENST00000592621 ABCC9O60706 1549 aa24.4■■□□□ 1.5
RANBP3-228ENST00000592621 ZCCHC6Q5VYS8 1495 aaKnown RBP23.65■■□□□ 1.38
RANBP3-228ENST00000592621 NACADO15069 1562 aa23.57■■□□□ 1.36
RANBP3-228ENST00000592621 RB1CC1Q8TDY2 1594 aa23.56■■□□□ 1.36
RANBP3-228ENST00000592621 MYO15BQ96JP2 1530 aa23.53■■□□□ 1.36
RANBP3-228ENST00000592621 DCAF8L2P0C7V8 631 aa23.48■■□□□ 1.35
RANBP3-228ENST00000592621 DCAF1Q9Y4B6 1507 aa23.48■■□□□ 1.35
RANBP3-228ENST00000592621 UNC13AQ9UPW8 1703 aa23.05■■□□□ 1.28
RANBP3-228ENST00000592621 SCRIBQ14160 1630 aa22.9■■□□□ 1.26
RANBP3-228ENST00000592621 BICRAQ9NZM4 1560 aa22.89■■□□□ 1.26
RANBP3-228ENST00000592621 PABPN1Q86U42 306 aaKnown RBP eCLIP22.81■■□□□ 1.246e-7■□□□□ 11.3
RANBP3-228ENST00000592621 SHROOM4Q9ULL8 1493 aa22.65■■□□□ 1.22
RANBP3-228ENST00000592621 DNAJC5BQ9UF47 199 aa22.32■■□□□ 1.16
RANBP3-228ENST00000592621 EIF4G1Q04637 1599 aaKnown RBP22.25■■□□□ 1.15
RANBP3-228ENST00000592621 CC2D2AQ9P2K1 1620 aa22.11■■□□□ 1.13
RANBP3-228ENST00000592621 CECR2Q9BXF3 1484 aa22.06■■□□□ 1.12
RANBP3-228ENST00000592621 SMARCA4P51532 1647 aa21.95■■□□□ 1.1
RANBP3-228ENST00000592621 BAZ1AQ9NRL2 1556 aaPredicted RBP21.93■■□□□ 1.1
RANBP3-228ENST00000592621 MROH2BQ7Z745 1585 aa21.84■■□□□ 1.09
RANBP3-228ENST00000592621 ATAD2BQ9ULI0 1458 aa21.8■■□□□ 1.08
RANBP3-228ENST00000592621 NCAPD3P42695 1498 aa21.77■■□□□ 1.08
RANBP3-228ENST00000592621 PEG3Q9GZU2 1588 aa21.77■■□□□ 1.08
RANBP3-228ENST00000592621 SMARCA2P51531 1590 aa21.75■■□□□ 1.07
RANBP3-228ENST00000592621 HMGXB3Q12766 1538 aa21.68■■□□□ 1.06
RANBP3-228ENST00000592621 RSF1Q96T23 1441 aaPredicted RBP21.63■■□□□ 1.05
RANBP3-228ENST00000592621 WIZO95785 1651 aa21.6■■□□□ 1.05
RANBP3-228ENST00000592621 BAZ1BQ9UIG0 1483 aaKnown RBP21.59■■□□□ 1.05
RANBP3-228ENST00000592621 TOP2AP11388 1531 aaKnown RBP21.39■■□□□ 1.01
RANBP3-228ENST00000592621 NESP48681 1621 aa21.19■□□□□ 0.98
RANBP3-228ENST00000592621 LAMC3Q9Y6N6 1575 aa21.16■□□□□ 0.98
RANBP3-228ENST00000592621 CCDC88BA6NC98 1476 aa21.13■□□□□ 0.97
RANBP3-228ENST00000592621 CADPSQ9ULU8 1353 aa21.12■□□□□ 0.97
RANBP3-228ENST00000592621 SUPT5HO00267 1087 aaKnown RBP21.09■□□□□ 0.97
RANBP3-228ENST00000592621 CFTRP13569 1480 aa21.05■□□□□ 0.96
RANBP3-228ENST00000592621 ERCC6Q03468 1493 aa20.99■□□□□ 0.95
RANBP3-228ENST00000592621 PDS5BQ9NTI5 1447 aa20.98■□□□□ 0.95
RANBP3-228ENST00000592621 KIF21AQ7Z4S6 1674 aa20.94■□□□□ 0.94
RANBP3-228ENST00000592621 FANCD2Q9BXW9 1451 aa20.88■□□□□ 0.93
RANBP3-228ENST00000592621 PRDM2Q13029 1718 aa20.87■□□□□ 0.93
RANBP3-228ENST00000592621 THOC2Q8NI27 1593 aaKnown RBP20.87■□□□□ 0.93
RANBP3-228ENST00000592621 CEP164Q9UPV0 1460 aa20.82■□□□□ 0.92
RANBP3-228ENST00000592621 CUX2O14529 1486 aa20.78■□□□□ 0.92
RANBP3-228ENST00000592621 MRC2Q9UBG0 1479 aa20.77■□□□□ 0.92
RANBP3-228ENST00000592621 WDR62O43379 1518 aa20.73■□□□□ 0.91
RANBP3-228ENST00000592621 URB2Q14146 1524 aaKnown RBP20.68■□□□□ 0.9
RANBP3-228ENST00000592621 TOPBP1Q92547 1522 aa20.57■□□□□ 0.88
RANBP3-228ENST00000592621 ABCC8Q09428 1581 aa20.55■□□□□ 0.88
RANBP3-228ENST00000592621 DNMBPQ6XZF7 1577 aa20.55■□□□□ 0.88
RANBP3-228ENST00000592621 CUX1P39880 1505 aa20.48■□□□□ 0.87
RANBP3-228ENST00000592621 POLA1P09884 1462 aaPredicted RBP20.41■□□□□ 0.86
RANBP3-228ENST00000592621 IFT140Q96RY7 1462 aa20.39■□□□□ 0.85
RANBP3-228ENST00000592621 FGD5Q6ZNL6 1462 aa20.37■□□□□ 0.85
RANBP3-228ENST00000592621 WRNQ14191 1432 aaPredicted RBP eCLIP20.36■□□□□ 0.855e-6■■■■■ 29.2
RANBP3-228ENST00000592621 TARBP1Q13395 1621 aaKnown RBP20.35■□□□□ 0.85
RANBP3-228ENST00000592621 BIVM-ERCC5R4GMW8 1640 aa20.34■□□□□ 0.85
RANBP3-228ENST00000592621 SYNJ1O43426 1573 aa20.34■□□□□ 0.85
RANBP3-228ENST00000592621 TOP2BQ02880 1626 aa20.33■□□□□ 0.84
RANBP3-228ENST00000592621 RAD54L2Q9Y4B4 1467 aa20.3■□□□□ 0.84
RANBP3-228ENST00000592621 ZNF608Q9ULD9 1512 aaPredicted RBP20.3■□□□□ 0.84
RANBP3-228ENST00000592621 SOGA1O94964 1423 aa20.29■□□□□ 0.84
RANBP3-228ENST00000592621 EIF4G3O43432 1585 aaKnown RBP20.23■□□□□ 0.83
RANBP3-228ENST00000592621 WDR97A6NE52 1622 aa20.23■□□□□ 0.83
RANBP3-228ENST00000592621 ABCA10Q8WWZ4 1543 aa20.19■□□□□ 0.82
RANBP3-228ENST00000592621 AQRO60306 1485 aaKnown RBP eCLIP20.18■□□□□ 0.825e-8■■■■■ 28.6
RANBP3-228ENST00000592621 TDRD9Q8NDG6 1382 aaKnown RBP20.16■□□□□ 0.82
RANBP3-228ENST00000592621 ABCA5Q8WWZ7 1642 aa20.11■□□□□ 0.81
RANBP3-228ENST00000592621 GAPVD1Q14C86 1478 aa20.06■□□□□ 0.8
RANBP3-228ENST00000592621 GRIN2BQ13224 1484 aa20.05■□□□□ 0.8
RANBP3-228ENST00000592621 PBRM1Q86U86 1689 aa20.03■□□□□ 0.8
RANBP3-228ENST00000592621 SNAPC4Q5SXM2 1469 aa20.01■□□□□ 0.79
RANBP3-228ENST00000592621 MAGI1Q96QZ7 1491 aaPredicted RBP19.99■□□□□ 0.79
RANBP3-228ENST00000592621 DNAJC5Q9H3Z4 198 aa19.96■□□□□ 0.79
RANBP3-228ENST00000592621 ERICH3Q5RHP9 1530 aa19.95■□□□□ 0.78
RANBP3-228ENST00000592621 CHD1O14646 1710 aa19.93■□□□□ 0.78
RANBP3-228ENST00000592621 TRIM41Q8WV44 630 aa19.92■□□□□ 0.78
RANBP3-228ENST00000592621 KIF27Q86VH2 1401 aa19.92■□□□□ 0.78
RANBP3-228ENST00000592621 SYNJ2O15056 1496 aa19.91■□□□□ 0.78
RANBP3-228ENST00000592621 ADAMTS12P58397 1594 aa19.89■□□□□ 0.77
RANBP3-228ENST00000592621 OSCARQ8IYS5 282 aa19.89■□□□□ 0.77
RANBP3-228ENST00000592621 IGF1RP08069 1367 aa19.85■□□□□ 0.77
RANBP3-228ENST00000592621 FHAD1B1AJZ9 1412 aa19.85■□□□□ 0.77
RANBP3-228ENST00000592621 FBLN2P98095 1184 aa19.84■□□□□ 0.77
RANBP3-228ENST00000592621 CHMP7Q8WUX9 453 aaPredicted RBP19.83■□□□□ 0.77
RANBP3-228ENST00000592621 CHIC1Q5VXU3 224 aa19.82■□□□□ 0.76
RANBP3-228ENST00000592621 RUSC2Q8N2Y8 1516 aa19.81■□□□□ 0.76
RANBP3-228ENST00000592621 GRIN2AQ12879 1464 aa19.8■□□□□ 0.76
RANBP3-228ENST00000592621 CUL7Q14999 1698 aa19.78■□□□□ 0.76
RANBP3-228ENST00000592621 CLASP1Q7Z460 1538 aa19.76■□□□□ 0.75
RANBP3-228ENST00000592621 NUP160Q12769 1436 aa19.73■□□□□ 0.75
RANBP3-228ENST00000592621 CEP170Q5SW79 1584 aa19.72■□□□□ 0.75
RANBP3-228ENST00000592621 CARMIL1Q5VZK9 1371 aa19.7■□□□□ 0.74
RANBP3-228ENST00000592621 EEA1Q15075 1411 aa19.63■□□□□ 0.73
RANBP3-228ENST00000592621 ARHGEF11O15085 1522 aa19.62■□□□□ 0.73
RANBP3-228ENST00000592621 PRXQ9BXM0 1461 aa19.61■□□□□ 0.73
RANBP3-228ENST00000592621 RAPGEF2Q9Y4G8 1499 aa19.61■□□□□ 0.73
RANBP3-228ENST00000592621 RIMBP3CA6NJZ7 1639 aa19.61■□□□□ 0.73
RANBP3-228ENST00000592621 RIMBP3BA6NNM3 1639 aa19.61■□□□□ 0.73
RANBP3-228ENST00000592621 RIMBP3Q9UFD9 1639 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms