RNA–Protein interactions for RNA: ENST00000592381.1

LINC02001-201, Transcript of long intergenic non-protein coding RNA 2001, humanhuman

TSL 2

Gene LINC02001, Length 1,298 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02001-201ENST00000592381 AEBP2Q6ZN18 517 aaPredicted RBP42.92■■■■■ 4.46
LINC02001-201ENST00000592381 CHIC1Q5VXU3 224 aa40.96■■■■■ 4.15
LINC02001-201ENST00000592381 SENP3Q9H4L4 574 aaPredicted RBP36.51■■■■□ 3.44
LINC02001-201ENST00000592381 NISCHQ9Y2I1 1504 aa36.18■■■■□ 3.38
LINC02001-201ENST00000592381 PHF23Q9BUL5 403 aaPredicted RBP36.09■■■■□ 3.37
LINC02001-201ENST00000592381 FOXD1Q16676 465 aa34.04■■■■□ 3.04
LINC02001-201ENST00000592381 PLPPR3Q6T4P5 718 aa32.79■■■□□ 2.84
LINC02001-201ENST00000592381 CCDC180Q9P1Z9 1646 aa32.06■■■□□ 2.72
LINC02001-201ENST00000592381 PPP6R1Q9UPN7 881 aa32.03■■■□□ 2.72
LINC02001-201ENST00000592381 ADRA2BP18089 450 aa31.89■■■□□ 2.7
LINC02001-201ENST00000592381 PIAS4Q8N2W9 510 aaPredicted RBP31.78■■■□□ 2.68
LINC02001-201ENST00000592381 MSH5O43196 834 aa31.72■■■□□ 2.67
LINC02001-201ENST00000592381 ABCC9O60706 1549 aa31.11■■■□□ 2.57
LINC02001-201ENST00000592381 POTEDQ86YR6 584 aa30.59■■■□□ 2.49
LINC02001-201ENST00000592381 ZCCHC6Q5VYS8 1495 aaKnown RBP30.19■■■□□ 2.42
LINC02001-201ENST00000592381 NACADO15069 1562 aa30.11■■■□□ 2.41
LINC02001-201ENST00000592381 RB1CC1Q8TDY2 1594 aa30.06■■■□□ 2.4
LINC02001-201ENST00000592381 MYO15BQ96JP2 1530 aa30.06■■■□□ 2.4
LINC02001-201ENST00000592381 DCAF8L2P0C7V8 631 aa30.03■■■□□ 2.4
LINC02001-201ENST00000592381 DCAF1Q9Y4B6 1507 aa29.99■■■□□ 2.39
LINC02001-201ENST00000592381 UNC13AQ9UPW8 1703 aa29.34■■■□□ 2.29
LINC02001-201ENST00000592381 MAPK8IP2Q13387 824 aaPredicted RBP29.24■■■□□ 2.27
LINC02001-201ENST00000592381 SCRIBQ14160 1630 aa29.21■■■□□ 2.27
LINC02001-201ENST00000592381 BICRAQ9NZM4 1560 aa29.16■■■□□ 2.26
LINC02001-201ENST00000592381 SCAF1Q9H7N4 1312 aaKnown RBP29.14■■■□□ 2.25
LINC02001-201ENST00000592381 PABPN1Q86U42 306 aaKnown RBP eCLIP29.1■■■□□ 2.25
LINC02001-201ENST00000592381 DMRT2Q9Y5R5 561 aa29.03■■■□□ 2.24
LINC02001-201ENST00000592381 SHROOM4Q9ULL8 1493 aa28.92■■■□□ 2.22
LINC02001-201ENST00000592381 PPP4R3CPQ6ZMV5 832 aa28.78■■■□□ 2.2
LINC02001-201ENST00000592381 DNAJC5BQ9UF47 199 aa28.38■■■□□ 2.13
LINC02001-201ENST00000592381 EIF4G1Q04637 1599 aaKnown RBP28.37■■■□□ 2.13
LINC02001-201ENST00000592381 CNKSR2Q8WXI2 1034 aa28.19■■■□□ 2.1
LINC02001-201ENST00000592381 CC2D2AQ9P2K1 1620 aa28.18■■■□□ 2.1
LINC02001-201ENST00000592381 CECR2Q9BXF3 1484 aa28.13■■■□□ 2.09
LINC02001-201ENST00000592381 HOXD11P31277 338 aaPredicted RBP28.07■■■□□ 2.08
LINC02001-201ENST00000592381 BAZ1AQ9NRL2 1556 aaPredicted RBP28.02■■■□□ 2.08
LINC02001-201ENST00000592381 SMARCA4P51532 1647 aa28■■■□□ 2.07
LINC02001-201ENST00000592381 RNF216Q9NWF9 866 aaPredicted RBP27.9■■■□□ 2.06
LINC02001-201ENST00000592381 MROH2BQ7Z745 1585 aa27.86■■■□□ 2.05
LINC02001-201ENST00000592381 ATAD2BQ9ULI0 1458 aa27.82■■■□□ 2.04
LINC02001-201ENST00000592381 NCAPD3P42695 1498 aa27.8■■■□□ 2.04
LINC02001-201ENST00000592381 SMARCA2P51531 1590 aa27.79■■■□□ 2.04
LINC02001-201ENST00000592381 PEG3Q9GZU2 1588 aa27.77■■■□□ 2.04
LINC02001-201ENST00000592381 NCBP3Q53F19 620 aaKnown RBP27.7■■■□□ 2.02
LINC02001-201ENST00000592381 HMGXB3Q12766 1538 aa27.67■■■□□ 2.02
LINC02001-201ENST00000592381 DCAF8L1A6NGE4 600 aa27.66■■■□□ 2.02
LINC02001-201ENST00000592381 RSF1Q96T23 1441 aaPredicted RBP27.65■■■□□ 2.02
LINC02001-201ENST00000592381 BAZ1BQ9UIG0 1483 aaKnown RBP27.58■■■□□ 2.01
LINC02001-201ENST00000592381 WIZO95785 1651 aa27.55■■■□□ 2
LINC02001-201ENST00000592381 NPM3O75607 178 aaKnown RBP27.36■■□□□ 1.97
LINC02001-201ENST00000592381 TOP2AP11388 1531 aaKnown RBP27.3■■□□□ 1.96
LINC02001-201ENST00000592381 RNF39Q9H2S5 420 aa27.13■■□□□ 1.93
LINC02001-201ENST00000592381 KCNA4P22459 653 aa27.03■■□□□ 1.92
LINC02001-201ENST00000592381 CACNB1Q02641 598 aaPredicted RBP27.03■■□□□ 1.92
LINC02001-201ENST00000592381 SUPT5HO00267 1087 aaKnown RBP27.02■■□□□ 1.92
LINC02001-201ENST00000592381 LAMC3Q9Y6N6 1575 aa27.01■■□□□ 1.91
LINC02001-201ENST00000592381 NESP48681 1621 aa27■■□□□ 1.91
LINC02001-201ENST00000592381 CADPSQ9ULU8 1353 aa26.98■■□□□ 1.91
LINC02001-201ENST00000592381 CCDC88BA6NC98 1476 aa26.98■■□□□ 1.91
LINC02001-201ENST00000592381 CFTRP13569 1480 aa26.87■■□□□ 1.89
LINC02001-201ENST00000592381 PDS5BQ9NTI5 1447 aa26.82■■□□□ 1.88
LINC02001-201ENST00000592381 ERCC6Q03468 1493 aa26.8■■□□□ 1.88
LINC02001-201ENST00000592381 C1QBPQ07021 282 aaKnown RBP26.73■■□□□ 1.87
LINC02001-201ENST00000592381 KIF21AQ7Z4S6 1674 aa26.66■■□□□ 1.86
LINC02001-201ENST00000592381 FANCD2Q9BXW9 1451 aa26.64■■□□□ 1.86
LINC02001-201ENST00000592381 PRDM2Q13029 1718 aa26.63■■□□□ 1.85
LINC02001-201ENST00000592381 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.63■■□□□ 1.85
LINC02001-201ENST00000592381 CEP164Q9UPV0 1460 aa26.59■■□□□ 1.85
LINC02001-201ENST00000592381 THOC2Q8NI27 1593 aaKnown RBP26.56■■□□□ 1.84
LINC02001-201ENST00000592381 MRC2Q9UBG0 1479 aa26.51■■□□□ 1.83
LINC02001-201ENST00000592381 CUX2O14529 1486 aa26.49■■□□□ 1.83
LINC02001-201ENST00000592381 WDR62O43379 1518 aa26.44■■□□□ 1.82
LINC02001-201ENST00000592381 URB2Q14146 1524 aaKnown RBP26.37■■□□□ 1.81
LINC02001-201ENST00000592381 ABCC8Q09428 1581 aa26.29■■□□□ 1.8
LINC02001-201ENST00000592381 TOPBP1Q92547 1522 aa26.24■■□□□ 1.79
LINC02001-201ENST00000592381 DNMBPQ6XZF7 1577 aa26.24■■□□□ 1.79
LINC02001-201ENST00000592381 U3KPZ7 1027 aaPredicted RBP26.18■■□□□ 1.78
LINC02001-201ENST00000592381 CUX1P39880 1505 aa26.13■■□□□ 1.77
LINC02001-201ENST00000592381 SLC4A2P04920 1241 aa26.11■■□□□ 1.77
LINC02001-201ENST00000592381 WRNQ14191 1432 aaPredicted RBP eCLIP26.05■■□□□ 1.76
LINC02001-201ENST00000592381 POLA1P09884 1462 aaPredicted RBP26.04■■□□□ 1.76
LINC02001-201ENST00000592381 IFT140Q96RY7 1462 aa26.04■■□□□ 1.76
LINC02001-201ENST00000592381 FGD5Q6ZNL6 1462 aa25.99■■□□□ 1.75
LINC02001-201ENST00000592381 TOP2BQ02880 1626 aa25.97■■□□□ 1.75
LINC02001-201ENST00000592381 BIVM-ERCC5R4GMW8 1640 aa25.96■■□□□ 1.75
LINC02001-201ENST00000592381 SYNJ1O43426 1573 aa25.95■■□□□ 1.75
LINC02001-201ENST00000592381 TARBP1Q13395 1621 aaKnown RBP25.95■■□□□ 1.74
LINC02001-201ENST00000592381 SOGA1O94964 1423 aa25.93■■□□□ 1.74
LINC02001-201ENST00000592381 RAD54L2Q9Y4B4 1467 aa25.9■■□□□ 1.74
LINC02001-201ENST00000592381 ZNF608Q9ULD9 1512 aaPredicted RBP25.88■■□□□ 1.73
LINC02001-201ENST00000592381 WDR97A6NE52 1622 aa25.79■■□□□ 1.72
LINC02001-201ENST00000592381 ABCA10Q8WWZ4 1543 aa25.78■■□□□ 1.72
LINC02001-201ENST00000592381 EIF4G3O43432 1585 aaKnown RBP25.78■■□□□ 1.72
LINC02001-201ENST00000592381 AQRO60306 1485 aaKnown RBP eCLIP25.76■■□□□ 1.71
LINC02001-201ENST00000592381 TDRD9Q8NDG6 1382 aaKnown RBP25.75■■□□□ 1.71
LINC02001-201ENST00000592381 SPINK5Q9NQ38 1064 aaPredicted RBP25.71■■□□□ 1.71
LINC02001-201ENST00000592381 ABCA5Q8WWZ7 1642 aa25.64■■□□□ 1.7
LINC02001-201ENST00000592381 GAPVD1Q14C86 1478 aa25.64■■□□□ 1.69
LINC02001-201ENST00000592381 GRIN2BQ13224 1484 aa25.61■■□□□ 1.69
LINC02001-201ENST00000592381 CAPN15O75808 1086 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms