RNA–Protein interactions for RNA: ENST00000592199.5

NFIX-214, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-214ENST00000592199 NISCHQ9Y2I1 1504 aa37.82■■■■□ 3.65
NFIX-214ENST00000592199 CCDC180Q9P1Z9 1646 aa33.04■■■□□ 2.88
NFIX-214ENST00000592199 ZCCHC6Q5VYS8 1495 aaKnown RBP31.81■■■□□ 2.68
NFIX-214ENST00000592199 DCAF1Q9Y4B6 1507 aa31.36■■■□□ 2.61
NFIX-214ENST00000592199 ABCC9O60706 1549 aa31.04■■■□□ 2.56
NFIX-214ENST00000592199 DCAF8L2P0C7V8 631 aa31■■■□□ 2.55
NFIX-214ENST00000592199 MYO15BQ96JP2 1530 aa30.98■■■□□ 2.55
NFIX-214ENST00000592199 NACADO15069 1562 aa30.73■■■□□ 2.51
NFIX-214ENST00000592199 SHROOM4Q9ULL8 1493 aa30.72■■■□□ 2.51
NFIX-214ENST00000592199 RB1CC1Q8TDY2 1594 aa30.44■■■□□ 2.46
NFIX-214ENST00000592199 SCRIBQ14160 1630 aa30.27■■■□□ 2.44
NFIX-214ENST00000592199 UNC13AQ9UPW8 1703 aa29.8■■■□□ 2.36
NFIX-214ENST00000592199 SUPT5HO00267 1087 aaKnown RBP29.56■■■□□ 2.32
NFIX-214ENST00000592199 BICRAQ9NZM4 1560 aa29.5■■■□□ 2.31
NFIX-214ENST00000592199 CECR2Q9BXF3 1484 aa29.32■■■□□ 2.28
NFIX-214ENST00000592199 RSF1Q96T23 1441 aaPredicted RBP29.32■■■□□ 2.28
NFIX-214ENST00000592199 BAZ1AQ9NRL2 1556 aaPredicted RBP29.22■■■□□ 2.27
NFIX-214ENST00000592199 PABPN1Q86U42 306 aaKnown RBP eCLIP29.2■■■□□ 2.27
NFIX-214ENST00000592199 MROH2BQ7Z745 1585 aa29.18■■■□□ 2.26
NFIX-214ENST00000592199 SMARCA4P51532 1647 aa29.08■■■□□ 2.25
NFIX-214ENST00000592199 WIZO95785 1651 aa28.95■■■□□ 2.22
NFIX-214ENST00000592199 PEG3Q9GZU2 1588 aa28.76■■■□□ 2.2
NFIX-214ENST00000592199 TOP2AP11388 1531 aaKnown RBP28.72■■■□□ 2.19
NFIX-214ENST00000592199 EIF4G1Q04637 1599 aaKnown RBP28.6■■■□□ 2.17
NFIX-214ENST00000592199 SMARCA2P51531 1590 aa28.59■■■□□ 2.17
NFIX-214ENST00000592199 ATAD2BQ9ULI0 1458 aa28.56■■■□□ 2.16
NFIX-214ENST00000592199 BAZ1BQ9UIG0 1483 aaKnown RBP28.4■■■□□ 2.14
NFIX-214ENST00000592199 CHIC1Q5VXU3 224 aa28.39■■■□□ 2.14
NFIX-214ENST00000592199 CCDC88BA6NC98 1476 aa28.36■■■□□ 2.13
NFIX-214ENST00000592199 HMGXB3Q12766 1538 aa28.34■■■□□ 2.13
NFIX-214ENST00000592199 NCAPD3P42695 1498 aa28.33■■■□□ 2.13
NFIX-214ENST00000592199 CC2D2AQ9P2K1 1620 aa28.15■■■□□ 2.1
NFIX-214ENST00000592199 TRIM41Q8WV44 630 aa27.85■■■□□ 2.05
NFIX-214ENST00000592199 ABCC8Q09428 1581 aa27.76■■■□□ 2.03
NFIX-214ENST00000592199 CFTRP13569 1480 aa27.71■■■□□ 2.03
NFIX-214ENST00000592199 PRDM2Q13029 1718 aa27.64■■■□□ 2.01
NFIX-214ENST00000592199 WRNQ14191 1432 aaPredicted RBP eCLIP27.61■■■□□ 2.01
NFIX-214ENST00000592199 CADPSQ9ULU8 1353 aa27.58■■■□□ 2.01
NFIX-214ENST00000592199 DNAJC5BQ9UF47 199 aa27.57■■■□□ 2
NFIX-214ENST00000592199 SYNJ1O43426 1573 aa27.5■■□□□ 1.99
NFIX-214ENST00000592199 TOP2BQ02880 1626 aa27.42■■□□□ 1.98
NFIX-214ENST00000592199 BIVM-ERCC5R4GMW8 1640 aa27.42■■□□□ 1.98
NFIX-214ENST00000592199 LAMC3Q9Y6N6 1575 aa27.39■■□□□ 1.98
NFIX-214ENST00000592199 EEA1Q15075 1411 aa27.3■■□□□ 1.96
NFIX-214ENST00000592199 CUX1P39880 1505 aa27.3■■□□□ 1.96
NFIX-214ENST00000592199 FANCD2Q9BXW9 1451 aa27.27■■□□□ 1.96
NFIX-214ENST00000592199 NESP48681 1621 aa27.26■■□□□ 1.95
NFIX-214ENST00000592199 FAM9AQ8IZU1 332 aaPredicted RBP27.26■■□□□ 1.95
NFIX-214ENST00000592199 SOGA1O94964 1423 aa27.23■■□□□ 1.95
NFIX-214ENST00000592199 LOC105371045A0A1W2PR82 267 aa27.22■■□□□ 1.95
NFIX-214ENST00000592199 PDS5BQ9NTI5 1447 aa27.13■■□□□ 1.93
NFIX-214ENST00000592199 CEP164Q9UPV0 1460 aa27.12■■□□□ 1.93
NFIX-214ENST00000592199 RUSC2Q8N2Y8 1516 aa27.11■■□□□ 1.93
NFIX-214ENST00000592199 DNMBPQ6XZF7 1577 aa27.09■■□□□ 1.93
NFIX-214ENST00000592199 CSRNP3Q8WYN3 585 aa27.03■■□□□ 1.92
NFIX-214ENST00000592199 KIF21AQ7Z4S6 1674 aa27■■□□□ 1.91
NFIX-214ENST00000592199 TOPBP1Q92547 1522 aa27■■□□□ 1.91
NFIX-214ENST00000592199 FGD5Q6ZNL6 1462 aa26.99■■□□□ 1.91
NFIX-214ENST00000592199 KIF21BO75037 1637 aa26.94■■□□□ 1.9
NFIX-214ENST00000592199 URB2Q14146 1524 aaKnown RBP26.93■■□□□ 1.9
NFIX-214ENST00000592199 KIF27Q86VH2 1401 aa26.92■■□□□ 1.9
NFIX-214ENST00000592199 GOLGA3Q08378 1498 aa26.89■■□□□ 1.9
NFIX-214ENST00000592199 POLA1P09884 1462 aaPredicted RBP26.86■■□□□ 1.89
NFIX-214ENST00000592199 CUX2O14529 1486 aa26.81■■□□□ 1.88
NFIX-214ENST00000592199 EHMT2Q96KQ7 1210 aa26.8■■□□□ 1.88
NFIX-214ENST00000592199 TNIKQ9UKE5 1360 aa26.8■■□□□ 1.88
NFIX-214ENST00000592199 MRC2Q9UBG0 1479 aa26.8■■□□□ 1.88
NFIX-214ENST00000592199 ABCA10Q8WWZ4 1543 aa26.79■■□□□ 1.88
NFIX-214ENST00000592199 ERICH3Q5RHP9 1530 aa26.76■■□□□ 1.88
NFIX-214ENST00000592199 PRXQ9BXM0 1461 aa26.76■■□□□ 1.87
NFIX-214ENST00000592199 WDR97A6NE52 1622 aa26.74■■□□□ 1.87
NFIX-214ENST00000592199 RAD54L2Q9Y4B4 1467 aa26.73■■□□□ 1.87
NFIX-214ENST00000592199 RAPGEF2Q9Y4G8 1499 aa26.69■■□□□ 1.86
NFIX-214ENST00000592199 WDR62O43379 1518 aa26.67■■□□□ 1.86
NFIX-214ENST00000592199 CEP162Q5TB80 1403 aa26.64■■□□□ 1.85
NFIX-214ENST00000592199 UBTFP17480 764 aaKnown RBP26.64■■□□□ 1.85
NFIX-214ENST00000592199 ERCC6Q03468 1493 aa26.63■■□□□ 1.85
NFIX-214ENST00000592199 IGF1RP08069 1367 aa26.63■■□□□ 1.85
NFIX-214ENST00000592199 TARBP1Q13395 1621 aaKnown RBP26.61■■□□□ 1.85
NFIX-214ENST00000592199 ABCA5Q8WWZ7 1642 aa26.59■■□□□ 1.85
NFIX-214ENST00000592199 THOC2Q8NI27 1593 aaKnown RBP26.59■■□□□ 1.85
NFIX-214ENST00000592199 CUL7Q14999 1698 aa26.53■■□□□ 1.84
NFIX-214ENST00000592199 CARMIL1Q5VZK9 1371 aa26.51■■□□□ 1.83
NFIX-214ENST00000592199 IFT140Q96RY7 1462 aa26.48■■□□□ 1.83
NFIX-214ENST00000592199 GAPVD1Q14C86 1478 aa26.47■■□□□ 1.83
NFIX-214ENST00000592199 TDRD9Q8NDG6 1382 aaKnown RBP26.44■■□□□ 1.82
NFIX-214ENST00000592199 CLIP1P30622 1438 aa26.42■■□□□ 1.82
NFIX-214ENST00000592199 PBRM1Q86U86 1689 aa26.37■■□□□ 1.81
NFIX-214ENST00000592199 GRIN2BQ13224 1484 aa26.28■■□□□ 1.8
NFIX-214ENST00000592199 AQRO60306 1485 aaKnown RBP eCLIP26.28■■□□□ 1.88e-7■■■■□ 22.8
NFIX-214ENST00000592199 ZNF608Q9ULD9 1512 aaPredicted RBP26.26■■□□□ 1.79
NFIX-214ENST00000592199 EIF4G3O43432 1585 aaKnown RBP26.25■■□□□ 1.79
NFIX-214ENST00000592199 ADAMTS12P58397 1594 aa26.24■■□□□ 1.79
NFIX-214ENST00000592199 VPS8Q8N3P4 1428 aa26.23■■□□□ 1.79
NFIX-214ENST00000592199 CTTNBP2Q8WZ74 1663 aa26.22■■□□□ 1.79
NFIX-214ENST00000592199 FHAD1B1AJZ9 1412 aa26.21■■□□□ 1.79
NFIX-214ENST00000592199 ARAP1Q96P48 1450 aa26.18■■□□□ 1.78
NFIX-214ENST00000592199 ARHGAP35Q9NRY4 1499 aa26.15■■□□□ 1.78
NFIX-214ENST00000592199 TRIM26Q12899 539 aaPredicted RBP26.11■■□□□ 1.77
NFIX-214ENST00000592199 RANGAP1P46060 587 aaPredicted RBP26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms