RNA–Protein interactions for RNA: ENST00000592078.1

CXXC1-217, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-217ENST00000592078 NISCHQ9Y2I1 1504 aa38.18■■■■□ 3.7
CXXC1-217ENST00000592078 ABCC9O60706 1549 aa34.58■■■■□ 3.13
CXXC1-217ENST00000592078 CCDC180Q9P1Z9 1646 aa34.45■■■■□ 3.11
CXXC1-217ENST00000592078 RB1CC1Q8TDY2 1594 aa32.96■■■□□ 2.87
CXXC1-217ENST00000592078 NACADO15069 1562 aa32.7■■■□□ 2.82
CXXC1-217ENST00000592078 DNAJC5BQ9UF47 199 aa32.65■■■□□ 2.82
CXXC1-217ENST00000592078 DCAF8L2P0C7V8 631 aa32.3■■■□□ 2.76
CXXC1-217ENST00000592078 MYO15BQ96JP2 1530 aa32.24■■■□□ 2.75
CXXC1-217ENST00000592078 PABPN1Q86U42 306 aaKnown RBP eCLIP32.12■■■□□ 2.73
CXXC1-217ENST00000592078 UNC13AQ9UPW8 1703 aa31.97■■■□□ 2.71
CXXC1-217ENST00000592078 BICRAQ9NZM4 1560 aa31.85■■■□□ 2.69
CXXC1-217ENST00000592078 SHROOM4Q9ULL8 1493 aa31.72■■■□□ 2.67
CXXC1-217ENST00000592078 DCAF1Q9Y4B6 1507 aa31.66■■■□□ 2.66
CXXC1-217ENST00000592078 ZCCHC6Q5VYS8 1495 aaKnown RBP31.56■■■□□ 2.64
CXXC1-217ENST00000592078 CECR2Q9BXF3 1484 aa31.27■■■□□ 2.6
CXXC1-217ENST00000592078 CC2D2AQ9P2K1 1620 aa31.26■■■□□ 2.59
CXXC1-217ENST00000592078 SCRIBQ14160 1630 aa31.17■■■□□ 2.58
CXXC1-217ENST00000592078 EIF4G1Q04637 1599 aaKnown RBP31.16■■■□□ 2.58
CXXC1-217ENST00000592078 DNAJC5Q9H3Z4 198 aa30.44■■■□□ 2.46
CXXC1-217ENST00000592078 NCAPD3P42695 1498 aa30.18■■■□□ 2.42
CXXC1-217ENST00000592078 CUX2O14529 1486 aa30.14■■■□□ 2.42
CXXC1-217ENST00000592078 ERCC6Q03468 1493 aa30■■■□□ 2.39
CXXC1-217ENST00000592078 ATAD2BQ9ULI0 1458 aa29.95■■■□□ 2.39
CXXC1-217ENST00000592078 SMARCA2P51531 1590 aa29.94■■■□□ 2.38
CXXC1-217ENST00000592078 HMGXB3Q12766 1538 aa29.91■■■□□ 2.38
CXXC1-217ENST00000592078 SMARCA4P51532 1647 aa29.8■■■□□ 2.36
CXXC1-217ENST00000592078 BAZ1AQ9NRL2 1556 aaPredicted RBP29.72■■■□□ 2.35
CXXC1-217ENST00000592078 BAZ1BQ9UIG0 1483 aaKnown RBP29.67■■■□□ 2.34
CXXC1-217ENST00000592078 PEG3Q9GZU2 1588 aa29.63■■■□□ 2.33
CXXC1-217ENST00000592078 NESP48681 1621 aa29.56■■■□□ 2.32
CXXC1-217ENST00000592078 LAMC3Q9Y6N6 1575 aa29.54■■■□□ 2.32
CXXC1-217ENST00000592078 PDS5BQ9NTI5 1447 aa29.43■■■□□ 2.3
CXXC1-217ENST00000592078 THOC2Q8NI27 1593 aaKnown RBP29.39■■■□□ 2.3
CXXC1-217ENST00000592078 MROH2BQ7Z745 1585 aa29.31■■■□□ 2.28
CXXC1-217ENST00000592078 CADPSQ9ULU8 1353 aa29.23■■■□□ 2.27
CXXC1-217ENST00000592078 KIF21AQ7Z4S6 1674 aa29.19■■■□□ 2.26
CXXC1-217ENST00000592078 MRC2Q9UBG0 1479 aa29.09■■■□□ 2.25
CXXC1-217ENST00000592078 WDR62O43379 1518 aa29.01■■■□□ 2.23
CXXC1-217ENST00000592078 CEP164Q9UPV0 1460 aa28.92■■■□□ 2.22
CXXC1-217ENST00000592078 WIZO95785 1651 aa28.9■■■□□ 2.22
CXXC1-217ENST00000592078 FANCD2Q9BXW9 1451 aa28.84■■■□□ 2.21
CXXC1-217ENST00000592078 TRIM41Q8WV44 630 aa28.82■■■□□ 2.2
CXXC1-217ENST00000592078 CFTRP13569 1480 aa28.81■■■□□ 2.2
CXXC1-217ENST00000592078 OSCARQ8IYS5 282 aa28.73■■■□□ 2.19
CXXC1-217ENST00000592078 RSF1Q96T23 1441 aaPredicted RBP28.66■■■□□ 2.18
CXXC1-217ENST00000592078 TOP2AP11388 1531 aaKnown RBP28.65■■■□□ 2.18
CXXC1-217ENST00000592078 URB2Q14146 1524 aaKnown RBP28.53■■■□□ 2.16
CXXC1-217ENST00000592078 PRDM2Q13029 1718 aa28.43■■■□□ 2.14
CXXC1-217ENST00000592078 IFT140Q96RY7 1462 aa28.4■■■□□ 2.14
CXXC1-217ENST00000592078 ABCC8Q09428 1581 aa28.37■■■□□ 2.13
CXXC1-217ENST00000592078 CCDC88BA6NC98 1476 aa28.29■■■□□ 2.12
CXXC1-217ENST00000592078 TOPBP1Q92547 1522 aa28.23■■■□□ 2.11
CXXC1-217ENST00000592078 ZNF608Q9ULD9 1512 aaPredicted RBP28.19■■■□□ 2.1
CXXC1-217ENST00000592078 RIMBP3CA6NJZ7 1639 aa28.19■■■□□ 2.1
CXXC1-217ENST00000592078 RIMBP3BA6NNM3 1639 aa28.19■■■□□ 2.1
CXXC1-217ENST00000592078 RIMBP3Q9UFD9 1639 aa28.19■■■□□ 2.1
CXXC1-217ENST00000592078 DNMBPQ6XZF7 1577 aa28.13■■■□□ 2.09
CXXC1-217ENST00000592078 ARHGEF11O15085 1522 aa28.13■■■□□ 2.09
CXXC1-217ENST00000592078 EIF4G3O43432 1585 aaKnown RBP28.07■■■□□ 2.08
CXXC1-217ENST00000592078 TARBP1Q13395 1621 aaKnown RBP27.98■■■□□ 2.07
CXXC1-217ENST00000592078 CYB5RLQ6IPT4 315 aa27.96■■■□□ 2.07
CXXC1-217ENST00000592078 AQRO60306 1485 aaKnown RBP eCLIP27.95■■■□□ 2.063e-7■■■■■ 36.6
CXXC1-217ENST00000592078 POLA1P09884 1462 aaPredicted RBP27.91■■■□□ 2.06
CXXC1-217ENST00000592078 WDR97A6NE52 1622 aa27.89■■■□□ 2.05
CXXC1-217ENST00000592078 FBLN2P98095 1184 aa27.88■■■□□ 2.05
CXXC1-217ENST00000592078 CHD1O14646 1710 aa27.87■■■□□ 2.05
CXXC1-217ENST00000592078 SOGA1O94964 1423 aa27.84■■■□□ 2.05
CXXC1-217ENST00000592078 ARAP1Q96P48 1450 aa27.78■■■□□ 2.04
CXXC1-217ENST00000592078 TRHP20396 242 aaPredicted RBP27.78■■■□□ 2.04
CXXC1-217ENST00000592078 TDRD9Q8NDG6 1382 aaKnown RBP27.74■■■□□ 2.03
CXXC1-217ENST00000592078 RAD54L2Q9Y4B4 1467 aa27.73■■■□□ 2.03
CXXC1-217ENST00000592078 MAGI1Q96QZ7 1491 aaPredicted RBP27.72■■■□□ 2.03
CXXC1-217ENST00000592078 CHMP7Q8WUX9 453 aaPredicted RBP27.72■■■□□ 2.03
CXXC1-217ENST00000592078 FGD5Q6ZNL6 1462 aa27.68■■■□□ 2.02
CXXC1-217ENST00000592078 SYNJ1O43426 1573 aa27.68■■■□□ 2.02
CXXC1-217ENST00000592078 GRIN2BQ13224 1484 aa27.67■■■□□ 2.02
CXXC1-217ENST00000592078 SNAPC4Q5SXM2 1469 aa27.66■■■□□ 2.02
CXXC1-217ENST00000592078 CLASP1Q7Z460 1538 aa27.63■■■□□ 2.01
CXXC1-217ENST00000592078 SYNJ2O15056 1496 aa27.6■■■□□ 2.01
CXXC1-217ENST00000592078 CUX1P39880 1505 aa27.57■■■□□ 2
CXXC1-217ENST00000592078 GAPVD1Q14C86 1478 aa27.49■■□□□ 1.99
CXXC1-217ENST00000592078 ABCA10Q8WWZ4 1543 aa27.43■■□□□ 1.98
CXXC1-217ENST00000592078 PBRM1Q86U86 1689 aa27.39■■□□□ 1.97
CXXC1-217ENST00000592078 SUPT5HO00267 1087 aaKnown RBP27.38■■□□□ 1.97
CXXC1-217ENST00000592078 ABCA5Q8WWZ7 1642 aa27.34■■□□□ 1.97
CXXC1-217ENST00000592078 WRNQ14191 1432 aaPredicted RBP eCLIP27.31■■□□□ 1.96
CXXC1-217ENST00000592078 AEBP2Q6ZN18 517 aaPredicted RBP27.28■■□□□ 1.96
CXXC1-217ENST00000592078 GRIN2AQ12879 1464 aa27.25■■□□□ 1.95
CXXC1-217ENST00000592078 NUP160Q12769 1436 aa27.2■■□□□ 1.94
CXXC1-217ENST00000592078 FHAD1B1AJZ9 1412 aa27.18■■□□□ 1.94
CXXC1-217ENST00000592078 ADAMTS12P58397 1594 aa27.14■■□□□ 1.94
CXXC1-217ENST00000592078 TOP2BQ02880 1626 aa27.12■■□□□ 1.93
CXXC1-217ENST00000592078 ERICH3Q5RHP9 1530 aa27.12■■□□□ 1.93
CXXC1-217ENST00000592078 CEP170Q5SW79 1584 aa27.11■■□□□ 1.93
CXXC1-217ENST00000592078 BIVM-ERCC5R4GMW8 1640 aa27.11■■□□□ 1.93
CXXC1-217ENST00000592078 SHROOM2Q13796 1616 aa27.08■■□□□ 1.93
CXXC1-217ENST00000592078 ERCC6L2Q5T890 1561 aa27.02■■□□□ 1.92
CXXC1-217ENST00000592078 JPH4Q96JJ6 628 aa26.96■■□□□ 1.91
CXXC1-217ENST00000592078 PRG4Q92954 1404 aaPredicted RBP26.94■■□□□ 1.9
CXXC1-217ENST00000592078 NPM1P06748 294 aaKnown RBP eCLIP26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms