RNA–Protein interactions for RNA: ENST00000592063.5

TMC6-221, Transcript of transmembrane channel like 6, humanhuman

TSL 5

Gene TMC6, Length 743 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-221ENST00000592063 NISCHQ9Y2I1 1504 aa34.91■■■■□ 3.18
TMC6-221ENST00000592063 ABCC9O60706 1549 aa31.62■■■□□ 2.65
TMC6-221ENST00000592063 CCDC180Q9P1Z9 1646 aa31.38■■■□□ 2.61
TMC6-221ENST00000592063 RB1CC1Q8TDY2 1594 aa30.01■■■□□ 2.39
TMC6-221ENST00000592063 NACADO15069 1562 aa29.75■■■□□ 2.35
TMC6-221ENST00000592063 DNAJC5BQ9UF47 199 aa29.75■■■□□ 2.35
TMC6-221ENST00000592063 DCAF8L2P0C7V8 631 aa29.64■■■□□ 2.34
TMC6-221ENST00000592063 PABPN1Q86U42 306 aaKnown RBP eCLIP29.41■■■□□ 2.31e-10■□□□□ 9.7
TMC6-221ENST00000592063 MYO15BQ96JP2 1530 aa29.27■■■□□ 2.28
TMC6-221ENST00000592063 UNC13AQ9UPW8 1703 aa29.17■■■□□ 2.26
TMC6-221ENST00000592063 BICRAQ9NZM4 1560 aa29.05■■■□□ 2.24
TMC6-221ENST00000592063 ZCCHC6Q5VYS8 1495 aaKnown RBP28.91■■■□□ 2.22
TMC6-221ENST00000592063 DCAF1Q9Y4B6 1507 aa28.83■■■□□ 2.21
TMC6-221ENST00000592063 SHROOM4Q9ULL8 1493 aa28.75■■■□□ 2.19
TMC6-221ENST00000592063 SCRIBQ14160 1630 aa28.62■■■□□ 2.17
TMC6-221ENST00000592063 CECR2Q9BXF3 1484 aa28.51■■■□□ 2.15
TMC6-221ENST00000592063 CC2D2AQ9P2K1 1620 aa28.51■■■□□ 2.15
TMC6-221ENST00000592063 EIF4G1Q04637 1599 aaKnown RBP28.41■■■□□ 2.14
TMC6-221ENST00000592063 DNAJC5Q9H3Z4 198 aa27.5■■□□□ 1.99
TMC6-221ENST00000592063 NCAPD3P42695 1498 aa27.46■■□□□ 1.99
TMC6-221ENST00000592063 ERCC6Q03468 1493 aa27.37■■□□□ 1.97
TMC6-221ENST00000592063 ATAD2BQ9ULI0 1458 aa27.36■■□□□ 1.97
TMC6-221ENST00000592063 CUX2O14529 1486 aa27.33■■□□□ 1.97
TMC6-221ENST00000592063 SMARCA2P51531 1590 aa27.3■■□□□ 1.96
TMC6-221ENST00000592063 SMARCA4P51532 1647 aa27.26■■□□□ 1.95
TMC6-221ENST00000592063 HMGXB3Q12766 1538 aa27.25■■□□□ 1.95
TMC6-221ENST00000592063 BAZ1AQ9NRL2 1556 aaPredicted RBP27.14■■□□□ 1.94
TMC6-221ENST00000592063 BAZ1BQ9UIG0 1483 aaKnown RBP27.13■■□□□ 1.93
TMC6-221ENST00000592063 NESP48681 1621 aa27.07■■□□□ 1.92
TMC6-221ENST00000592063 PEG3Q9GZU2 1588 aa26.99■■□□□ 1.91
TMC6-221ENST00000592063 MROH2BQ7Z745 1585 aa26.88■■□□□ 1.89
TMC6-221ENST00000592063 LAMC3Q9Y6N6 1575 aa26.88■■□□□ 1.89
TMC6-221ENST00000592063 THOC2Q8NI27 1593 aaKnown RBP26.82■■□□□ 1.88
TMC6-221ENST00000592063 PDS5BQ9NTI5 1447 aa26.78■■□□□ 1.88
TMC6-221ENST00000592063 KIF21AQ7Z4S6 1674 aa26.67■■□□□ 1.86
TMC6-221ENST00000592063 CADPSQ9ULU8 1353 aa26.65■■□□□ 1.86
TMC6-221ENST00000592063 MRC2Q9UBG0 1479 aa26.54■■□□□ 1.84
TMC6-221ENST00000592063 WIZO95785 1651 aa26.52■■□□□ 1.84
TMC6-221ENST00000592063 WDR62O43379 1518 aa26.44■■□□□ 1.82
TMC6-221ENST00000592063 CEP164Q9UPV0 1460 aa26.41■■□□□ 1.82
TMC6-221ENST00000592063 FANCD2Q9BXW9 1451 aa26.35■■□□□ 1.81
TMC6-221ENST00000592063 TRIM41Q8WV44 630 aa26.29■■□□□ 1.8
TMC6-221ENST00000592063 RSF1Q96T23 1441 aaPredicted RBP26.29■■□□□ 1.8
TMC6-221ENST00000592063 CFTRP13569 1480 aa26.29■■□□□ 1.8
TMC6-221ENST00000592063 TOP2AP11388 1531 aaKnown RBP26.24■■□□□ 1.79
TMC6-221ENST00000592063 URB2Q14146 1524 aaKnown RBP26.1■■□□□ 1.77
TMC6-221ENST00000592063 OSCARQ8IYS5 282 aa26.08■■□□□ 1.77
TMC6-221ENST00000592063 CCDC88BA6NC98 1476 aa25.93■■□□□ 1.74
TMC6-221ENST00000592063 PRDM2Q13029 1718 aa25.91■■□□□ 1.74
TMC6-221ENST00000592063 IFT140Q96RY7 1462 aa25.89■■□□□ 1.73
TMC6-221ENST00000592063 ZNF608Q9ULD9 1512 aaPredicted RBP25.82■■□□□ 1.72
TMC6-221ENST00000592063 TOPBP1Q92547 1522 aa25.81■■□□□ 1.72
TMC6-221ENST00000592063 ABCC8Q09428 1581 aa25.78■■□□□ 1.72
TMC6-221ENST00000592063 DNMBPQ6XZF7 1577 aa25.7■■□□□ 1.71
TMC6-221ENST00000592063 RIMBP3CA6NJZ7 1639 aa25.68■■□□□ 1.7
TMC6-221ENST00000592063 RIMBP3BA6NNM3 1639 aa25.68■■□□□ 1.7
TMC6-221ENST00000592063 RIMBP3Q9UFD9 1639 aa25.68■■□□□ 1.7
TMC6-221ENST00000592063 EIF4G3O43432 1585 aaKnown RBP25.67■■□□□ 1.7
TMC6-221ENST00000592063 ARHGEF11O15085 1522 aa25.63■■□□□ 1.69
TMC6-221ENST00000592063 AQRO60306 1485 aaKnown RBP eCLIP25.58■■□□□ 1.693e-9■■■■■ 29.6
TMC6-221ENST00000592063 TARBP1Q13395 1621 aaKnown RBP25.54■■□□□ 1.68
TMC6-221ENST00000592063 POLA1P09884 1462 aaPredicted RBP25.53■■□□□ 1.68
TMC6-221ENST00000592063 FBLN2P98095 1184 aa25.52■■□□□ 1.68
TMC6-221ENST00000592063 CYB5RLQ6IPT4 315 aa25.48■■□□□ 1.67
TMC6-221ENST00000592063 CHD1O14646 1710 aa25.46■■□□□ 1.67
TMC6-221ENST00000592063 SOGA1O94964 1423 aa25.45■■□□□ 1.66
TMC6-221ENST00000592063 RAD54L2Q9Y4B4 1467 aa25.44■■□□□ 1.66
TMC6-221ENST00000592063 TDRD9Q8NDG6 1382 aaKnown RBP25.41■■□□□ 1.66
TMC6-221ENST00000592063 FGD5Q6ZNL6 1462 aa25.36■■□□□ 1.65
TMC6-221ENST00000592063 ARAP1Q96P48 1450 aa25.35■■□□□ 1.65
TMC6-221ENST00000592063 SNAPC4Q5SXM2 1469 aa25.33■■□□□ 1.65
TMC6-221ENST00000592063 WDR97A6NE52 1622 aa25.32■■□□□ 1.64
TMC6-221ENST00000592063 TRHP20396 242 aaPredicted RBP25.3■■□□□ 1.64
TMC6-221ENST00000592063 CHMP7Q8WUX9 453 aaPredicted RBP25.29■■□□□ 1.64
TMC6-221ENST00000592063 CUX1P39880 1505 aa25.27■■□□□ 1.64
TMC6-221ENST00000592063 MAGI1Q96QZ7 1491 aaPredicted RBP25.26■■□□□ 1.63
TMC6-221ENST00000592063 GRIN2BQ13224 1484 aa25.25■■□□□ 1.63
TMC6-221ENST00000592063 SYNJ1O43426 1573 aa25.22■■□□□ 1.63
TMC6-221ENST00000592063 CLASP1Q7Z460 1538 aa25.21■■□□□ 1.63
TMC6-221ENST00000592063 SYNJ2O15056 1496 aa25.18■■□□□ 1.62
TMC6-221ENST00000592063 SUPT5HO00267 1087 aaKnown RBP25.18■■□□□ 1.62
TMC6-221ENST00000592063 GAPVD1Q14C86 1478 aa25.12■■□□□ 1.61
TMC6-221ENST00000592063 ABCA10Q8WWZ4 1543 aa25.06■■□□□ 1.6
TMC6-221ENST00000592063 PBRM1Q86U86 1689 aa25.04■■□□□ 1.6
TMC6-221ENST00000592063 ABCA5Q8WWZ7 1642 aa25■■□□□ 1.59
TMC6-221ENST00000592063 WRNQ14191 1432 aaPredicted RBP eCLIP24.96■■□□□ 1.59
TMC6-221ENST00000592063 GRIN2AQ12879 1464 aa24.9■■□□□ 1.58
TMC6-221ENST00000592063 ADAMTS12P58397 1594 aa24.85■■□□□ 1.57
TMC6-221ENST00000592063 TOP2BQ02880 1626 aa24.83■■□□□ 1.56
TMC6-221ENST00000592063 NUP160Q12769 1436 aa24.82■■□□□ 1.56
TMC6-221ENST00000592063 FHAD1B1AJZ9 1412 aa24.81■■□□□ 1.56
TMC6-221ENST00000592063 BIVM-ERCC5R4GMW8 1640 aa24.8■■□□□ 1.56
TMC6-221ENST00000592063 CEP170Q5SW79 1584 aa24.79■■□□□ 1.56
TMC6-221ENST00000592063 ERCC6L2Q5T890 1561 aa24.77■■□□□ 1.56
TMC6-221ENST00000592063 ERICH3Q5RHP9 1530 aa24.75■■□□□ 1.55
TMC6-221ENST00000592063 AEBP2Q6ZN18 517 aaPredicted RBP24.72■■□□□ 1.55
TMC6-221ENST00000592063 SHROOM2Q13796 1616 aa24.68■■□□□ 1.54
TMC6-221ENST00000592063 PRG4Q92954 1404 aaPredicted RBP24.62■■□□□ 1.53
TMC6-221ENST00000592063 JPH4Q96JJ6 628 aa24.59■■□□□ 1.53
TMC6-221ENST00000592063 RUSC2Q8N2Y8 1516 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms