RNA–Protein interactions for RNA: ENST00000591805.5

SMAD7-208, Transcript of SMAD family member 7, humanhuman

TSL 2 BASIC

Gene SMAD7, Length 1,152 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-208ENST00000591805 NISCHQ9Y2I1 1504 aa32.88■■■□□ 2.85
SMAD7-208ENST00000591805 CCDC180Q9P1Z9 1646 aa29.25■■■□□ 2.27
SMAD7-208ENST00000591805 ABCC9O60706 1549 aa28.78■■■□□ 2.2
SMAD7-208ENST00000591805 RB1CC1Q8TDY2 1594 aa27.65■■■□□ 2.02
SMAD7-208ENST00000591805 NACADO15069 1562 aa27.62■■■□□ 2.01
SMAD7-208ENST00000591805 DCAF8L2P0C7V8 631 aa27.57■■■□□ 2
SMAD7-208ENST00000591805 MYO15BQ96JP2 1530 aa27.46■■□□□ 1.99
SMAD7-208ENST00000591805 ZCCHC6Q5VYS8 1495 aaKnown RBP27.32■■□□□ 1.96
SMAD7-208ENST00000591805 DCAF1Q9Y4B6 1507 aa27.26■■□□□ 1.95
SMAD7-208ENST00000591805 PABPN1Q86U42 306 aaKnown RBP eCLIP26.92■■□□□ 1.9
SMAD7-208ENST00000591805 UNC13AQ9UPW8 1703 aa26.89■■□□□ 1.9
SMAD7-208ENST00000591805 BICRAQ9NZM4 1560 aa26.79■■□□□ 1.88
SMAD7-208ENST00000591805 DNAJC5BQ9UF47 199 aa26.66■■□□□ 1.86
SMAD7-208ENST00000591805 SCRIBQ14160 1630 aa26.6■■□□□ 1.85
SMAD7-208ENST00000591805 SHROOM4Q9ULL8 1493 aa26.6■■□□□ 1.85
SMAD7-208ENST00000591805 EIF4G1Q04637 1599 aaKnown RBP26.11■■□□□ 1.77
SMAD7-208ENST00000591805 CC2D2AQ9P2K1 1620 aa26.03■■□□□ 1.76
SMAD7-208ENST00000591805 CECR2Q9BXF3 1484 aa25.92■■□□□ 1.74
SMAD7-208ENST00000591805 NCAPD3P42695 1498 aa25.53■■□□□ 1.68
SMAD7-208ENST00000591805 SMARCA4P51532 1647 aa25.49■■□□□ 1.67
SMAD7-208ENST00000591805 BAZ1AQ9NRL2 1556 aaPredicted RBP25.49■■□□□ 1.67
SMAD7-208ENST00000591805 ATAD2BQ9ULI0 1458 aa25.47■■□□□ 1.67
SMAD7-208ENST00000591805 SMARCA2P51531 1590 aa25.42■■□□□ 1.66
SMAD7-208ENST00000591805 HMGXB3Q12766 1538 aa25.32■■□□□ 1.64
SMAD7-208ENST00000591805 PEG3Q9GZU2 1588 aa25.31■■□□□ 1.64
SMAD7-208ENST00000591805 MROH2BQ7Z745 1585 aa25.29■■□□□ 1.64
SMAD7-208ENST00000591805 BAZ1BQ9UIG0 1483 aaKnown RBP25.21■■□□□ 1.63
SMAD7-208ENST00000591805 RSF1Q96T23 1441 aaPredicted RBP25.01■■□□□ 1.59
SMAD7-208ENST00000591805 WIZO95785 1651 aa24.97■■□□□ 1.59
SMAD7-208ENST00000591805 NESP48681 1621 aa24.84■■□□□ 1.57
SMAD7-208ENST00000591805 ERCC6Q03468 1493 aa24.83■■□□□ 1.57
SMAD7-208ENST00000591805 LAMC3Q9Y6N6 1575 aa24.82■■□□□ 1.56
SMAD7-208ENST00000591805 CADPSQ9ULU8 1353 aa24.78■■□□□ 1.56
SMAD7-208ENST00000591805 TOP2AP11388 1531 aaKnown RBP24.74■■□□□ 1.55
SMAD7-208ENST00000591805 PDS5BQ9NTI5 1447 aa24.72■■□□□ 1.55
SMAD7-208ENST00000591805 CUX2O14529 1486 aa24.7■■□□□ 1.54
SMAD7-208ENST00000591805 CFTRP13569 1480 aa24.57■■□□□ 1.52
SMAD7-208ENST00000591805 CCDC88BA6NC98 1476 aa24.5■■□□□ 1.51
SMAD7-208ENST00000591805 KIF21AQ7Z4S6 1674 aa24.48■■□□□ 1.51
SMAD7-208ENST00000591805 THOC2Q8NI27 1593 aaKnown RBP24.47■■□□□ 1.51
SMAD7-208ENST00000591805 FANCD2Q9BXW9 1451 aa24.42■■□□□ 1.5
SMAD7-208ENST00000591805 MRC2Q9UBG0 1479 aa24.4■■□□□ 1.5
SMAD7-208ENST00000591805 CEP164Q9UPV0 1460 aa24.39■■□□□ 1.5
SMAD7-208ENST00000591805 WDR62O43379 1518 aa24.31■■□□□ 1.48
SMAD7-208ENST00000591805 SUPT5HO00267 1087 aaKnown RBP24.23■■□□□ 1.47
SMAD7-208ENST00000591805 DNAJC5Q9H3Z4 198 aa24.22■■□□□ 1.47
SMAD7-208ENST00000591805 PRDM2Q13029 1718 aa24.21■■□□□ 1.47
SMAD7-208ENST00000591805 URB2Q14146 1524 aaKnown RBP24.16■■□□□ 1.46
SMAD7-208ENST00000591805 ABCC8Q09428 1581 aa24.1■■□□□ 1.45
SMAD7-208ENST00000591805 TOPBP1Q92547 1522 aa24■■□□□ 1.43
SMAD7-208ENST00000591805 DNMBPQ6XZF7 1577 aa23.95■■□□□ 1.42
SMAD7-208ENST00000591805 IFT140Q96RY7 1462 aa23.94■■□□□ 1.42
SMAD7-208ENST00000591805 POLA1P09884 1462 aaPredicted RBP23.78■■□□□ 1.4
SMAD7-208ENST00000591805 ZNF608Q9ULD9 1512 aaPredicted RBP23.77■■□□□ 1.4
SMAD7-208ENST00000591805 SOGA1O94964 1423 aa23.75■■□□□ 1.39
SMAD7-208ENST00000591805 OSCARQ8IYS5 282 aa23.74■■□□□ 1.39
SMAD7-208ENST00000591805 CUX1P39880 1505 aa23.73■■□□□ 1.39
SMAD7-208ENST00000591805 TARBP1Q13395 1621 aaKnown RBP23.73■■□□□ 1.39
SMAD7-208ENST00000591805 FGD5Q6ZNL6 1462 aa23.68■■□□□ 1.38
SMAD7-208ENST00000591805 RAD54L2Q9Y4B4 1467 aa23.68■■□□□ 1.38
SMAD7-208ENST00000591805 AQRO60306 1485 aaKnown RBP eCLIP23.66■■□□□ 1.38
SMAD7-208ENST00000591805 EIF4G3O43432 1585 aaKnown RBP23.62■■□□□ 1.37
SMAD7-208ENST00000591805 TDRD9Q8NDG6 1382 aaKnown RBP23.61■■□□□ 1.37
SMAD7-208ENST00000591805 WDR97A6NE52 1622 aa23.59■■□□□ 1.37
SMAD7-208ENST00000591805 WRNQ14191 1432 aaPredicted RBP eCLIP23.57■■□□□ 1.36
SMAD7-208ENST00000591805 ABCA10Q8WWZ4 1543 aa23.5■■□□□ 1.35
SMAD7-208ENST00000591805 TOP2BQ02880 1626 aa23.5■■□□□ 1.35
SMAD7-208ENST00000591805 GRIN2BQ13224 1484 aa23.47■■□□□ 1.35
SMAD7-208ENST00000591805 BIVM-ERCC5R4GMW8 1640 aa23.47■■□□□ 1.35
SMAD7-208ENST00000591805 GAPVD1Q14C86 1478 aa23.43■■□□□ 1.34
SMAD7-208ENST00000591805 FBLN2P98095 1184 aa23.43■■□□□ 1.34
SMAD7-208ENST00000591805 SYNJ1O43426 1573 aa23.43■■□□□ 1.34
SMAD7-208ENST00000591805 MAGI1Q96QZ7 1491 aaPredicted RBP23.42■■□□□ 1.34
SMAD7-208ENST00000591805 CHMP7Q8WUX9 453 aaPredicted RBP23.4■■□□□ 1.34
SMAD7-208ENST00000591805 SNAPC4Q5SXM2 1469 aa23.39■■□□□ 1.34
SMAD7-208ENST00000591805 ABCA5Q8WWZ7 1642 aa23.33■■□□□ 1.33
SMAD7-208ENST00000591805 SYNJ2O15056 1496 aa23.33■■□□□ 1.33
SMAD7-208ENST00000591805 CHD1O14646 1710 aa23.32■■□□□ 1.32
SMAD7-208ENST00000591805 PBRM1Q86U86 1689 aa23.26■■□□□ 1.31
SMAD7-208ENST00000591805 TRIM41Q8WV44 630 aa23.23■■□□□ 1.31
SMAD7-208ENST00000591805 ERICH3Q5RHP9 1530 aa23.22■■□□□ 1.31
SMAD7-208ENST00000591805 ARHGEF11O15085 1522 aa23.2■■□□□ 1.3
SMAD7-208ENST00000591805 FHAD1B1AJZ9 1412 aa23.19■■□□□ 1.3
SMAD7-208ENST00000591805 RIMBP3CA6NJZ7 1639 aa23.19■■□□□ 1.3
SMAD7-208ENST00000591805 RIMBP3BA6NNM3 1639 aa23.19■■□□□ 1.3
SMAD7-208ENST00000591805 RIMBP3Q9UFD9 1639 aa23.19■■□□□ 1.3
SMAD7-208ENST00000591805 CLASP1Q7Z460 1538 aa23.15■■□□□ 1.3
SMAD7-208ENST00000591805 GRIN2AQ12879 1464 aa23.13■■□□□ 1.29
SMAD7-208ENST00000591805 KIF27Q86VH2 1401 aa23.12■■□□□ 1.29
SMAD7-208ENST00000591805 ADAMTS12P58397 1594 aa23.11■■□□□ 1.29
SMAD7-208ENST00000591805 IGF1RP08069 1367 aa23.09■■□□□ 1.29
SMAD7-208ENST00000591805 CYB5RLQ6IPT4 315 aa23.08■■□□□ 1.29
SMAD7-208ENST00000591805 NUP160Q12769 1436 aa23.08■■□□□ 1.28
SMAD7-208ENST00000591805 ARAP1Q96P48 1450 aa22.99■■□□□ 1.27
SMAD7-208ENST00000591805 CEP170Q5SW79 1584 aa22.97■■□□□ 1.27
SMAD7-208ENST00000591805 CARMIL1Q5VZK9 1371 aa22.93■■□□□ 1.26
SMAD7-208ENST00000591805 CUL7Q14999 1698 aa22.91■■□□□ 1.26
SMAD7-208ENST00000591805 JPH4Q96JJ6 628 aa22.91■■□□□ 1.26
SMAD7-208ENST00000591805 SHROOM2Q13796 1616 aa22.86■■□□□ 1.25
SMAD7-208ENST00000591805 KIAA0586Q9BVV6 1533 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms