RNA–Protein interactions for RNA: ENST00000591649.5

ILF3-221, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 2

Gene ILF3, Length 2,579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-221ENST00000591649 NISCHQ9Y2I1 1504 aa26.17■■□□□ 1.78
ILF3-221ENST00000591649 HRCP23327 699 aa24.11■■□□□ 1.45
ILF3-221ENST00000591649 PELP1Q8IZL8 1130 aaKnown RBP23.98■■□□□ 1.43
ILF3-221ENST00000591649 PPARGC1BQ86YN6 1023 aaKnown RBP23.92■■□□□ 1.42
ILF3-221ENST00000591649 SHROOM4Q9ULL8 1493 aa23.79■■□□□ 1.4
ILF3-221ENST00000591649 SUPT5HO00267 1087 aaKnown RBP23.75■■□□□ 1.39
ILF3-221ENST00000591649 PCGF6Q9BYE7 350 aa23.75■■□□□ 1.39
ILF3-221ENST00000591649 MYT1Q01538 1121 aa23.51■■□□□ 1.35
ILF3-221ENST00000591649 MYO15BQ96JP2 1530 aa23.47■■□□□ 1.35
ILF3-221ENST00000591649 CHIC1Q5VXU3 224 aa23.24■■□□□ 1.31
ILF3-221ENST00000591649 SCAF1Q9H7N4 1312 aaKnown RBP23.02■■□□□ 1.28
ILF3-221ENST00000591649 LOC105371045A0A1W2PR82 267 aa22.94■■□□□ 1.26
ILF3-221ENST00000591649 TRIM26Q12899 539 aaPredicted RBP22.72■■□□□ 1.23
ILF3-221ENST00000591649 DCAF1Q9Y4B6 1507 aa22.7■■□□□ 1.22
ILF3-221ENST00000591649 TTBK1Q5TCY1 1321 aaPredicted RBP22.55■■□□□ 1.2
ILF3-221ENST00000591649 CCDC180Q9P1Z9 1646 aa22.43■■□□□ 1.18
ILF3-221ENST00000591649 ZEB1P37275 1124 aaPredicted RBP22.42■■□□□ 1.18
ILF3-221ENST00000591649 NEUROD1Q13562 356 aa22.36■■□□□ 1.17
ILF3-221ENST00000591649 DCAF8L2P0C7V8 631 aa22.32■■□□□ 1.16
ILF3-221ENST00000591649 ACIN1Q9UKV3 1341 aaKnown RBP22.29■■□□□ 1.16
ILF3-221ENST00000591649 ZCCHC6Q5VYS8 1495 aaKnown RBP22.25■■□□□ 1.15
ILF3-221ENST00000591649 GTF3C3Q9Y5Q9 886 aa22.24■■□□□ 1.15
ILF3-221ENST00000591649 EHMT2Q96KQ7 1210 aa22.14■■□□□ 1.14
ILF3-221ENST00000591649 FAM9AQ8IZU1 332 aaPredicted RBP22.04■■□□□ 1.12
ILF3-221ENST00000591649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.98■■□□□ 1.11
ILF3-221ENST00000591649 CENPBP07199 599 aaPredicted RBP21.9■■□□□ 1.1
ILF3-221ENST00000591649 DIEXFQ68CQ4 756 aaKnown RBP21.89■■□□□ 1.09
ILF3-221ENST00000591649 CCER1Q8TC90 406 aaPredicted RBP21.83■■□□□ 1.08
ILF3-221ENST00000591649 TRIM41Q8WV44 630 aa21.78■■□□□ 1.08
ILF3-221ENST00000591649 YTHDC1Q96MU7 727 aaKnown RBP21.76■■□□□ 1.07
ILF3-221ENST00000591649 PRKCSHP14314 528 aaPredicted RBP21.57■■□□□ 1.04
ILF3-221ENST00000591649 BCL11AQ9H165 835 aa21.45■■□□□ 1.03
ILF3-221ENST00000591649 MIER1Q8N108 512 aa21.4■■□□□ 1.02
ILF3-221ENST00000591649 ZNF316A6NFI3 1004 aaPredicted RBP21.36■■□□□ 1.01
ILF3-221ENST00000591649 ERICH6Q7L0X2 663 aa21.27■□□□□ 0.99
ILF3-221ENST00000591649 RSF1Q96T23 1441 aaPredicted RBP21.24■□□□□ 0.99
ILF3-221ENST00000591649 RB1CC1Q8TDY2 1594 aa21.21■□□□□ 0.99
ILF3-221ENST00000591649 APLP2Q06481 763 aa21.2■□□□□ 0.98
ILF3-221ENST00000591649 ABCC9O60706 1549 aa21.15■□□□□ 0.98
ILF3-221ENST00000591649 SUPT16HQ9Y5B9 1047 aaKnown RBP21.06■□□□□ 0.96
ILF3-221ENST00000591649 ANP32EQ9BTT0 268 aa21.05■□□□□ 0.96
ILF3-221ENST00000591649 TSHZ2Q9NRE2 1034 aa21.02■□□□□ 0.96
ILF3-221ENST00000591649 CSRNP3Q8WYN3 585 aa20.98■□□□□ 0.95
ILF3-221ENST00000591649 HNRNPUL2Q1KMD3 747 aaKnown RBP20.95■□□□□ 0.94
ILF3-221ENST00000591649 SCRIBQ14160 1630 aa20.85■□□□□ 0.93
ILF3-221ENST00000591649 BCANQ96GW7 911 aa20.8■□□□□ 0.92
ILF3-221ENST00000591649 CEP162Q5TB80 1403 aa20.8■□□□□ 0.92
ILF3-221ENST00000591649 WRNQ14191 1432 aaPredicted RBP eCLIP20.77■□□□□ 0.92
ILF3-221ENST00000591649 UBTFP17480 764 aaKnown RBP20.7■□□□□ 0.9
ILF3-221ENST00000591649 CECR2Q9BXF3 1484 aa20.69■□□□□ 0.9
ILF3-221ENST00000591649 KCNH8Q96L42 1107 aa20.66■□□□□ 0.9
ILF3-221ENST00000591649 CLSPNQ9HAW4 1339 aa20.62■□□□□ 0.89
ILF3-221ENST00000591649 CCDC88BA6NC98 1476 aa20.61■□□□□ 0.89
ILF3-221ENST00000591649 SOGA1O94964 1423 aa20.6■□□□□ 0.89
ILF3-221ENST00000591649 MROH2BQ7Z745 1585 aa20.59■□□□□ 0.89
ILF3-221ENST00000591649 ABCC8Q09428 1581 aa20.58■□□□□ 0.88
ILF3-221ENST00000591649 TNIKQ9UKE5 1360 aa20.55■□□□□ 0.88
ILF3-221ENST00000591649 WIZO95785 1651 aa20.55■□□□□ 0.88
ILF3-221ENST00000591649 FKBP8Q14318 412 aa20.54■□□□□ 0.88
ILF3-221ENST00000591649 RBM19Q9Y4C8 960 aaKnown RBP20.52■□□□□ 0.88
ILF3-221ENST00000591649 RUSC2Q8N2Y8 1516 aa20.5■□□□□ 0.87
ILF3-221ENST00000591649 ITGAEP38570 1179 aa20.48■□□□□ 0.87
ILF3-221ENST00000591649 RANGAP1P46060 587 aaPredicted RBP20.47■□□□□ 0.87
ILF3-221ENST00000591649 MSH5O43196 834 aa20.41■□□□□ 0.86
ILF3-221ENST00000591649 EIF4G1Q04637 1599 aaKnown RBP20.38■□□□□ 0.85
ILF3-221ENST00000591649 DHX57Q6P158 1386 aaKnown RBP20.32■□□□□ 0.84
ILF3-221ENST00000591649 SLC24A1O60721 1099 aa20.26■□□□□ 0.83
ILF3-221ENST00000591649 TRIM52Q96A61 297 aa20.25■□□□□ 0.83
ILF3-221ENST00000591649 GOLGA3Q08378 1498 aa20.24■□□□□ 0.83
ILF3-221ENST00000591649 DDX10Q13206 875 aaKnown RBP20.21■□□□□ 0.83
ILF3-221ENST00000591649 CLIP1P30622 1438 aa20.21■□□□□ 0.83
ILF3-221ENST00000591649 NEFLP07196 543 aa20.2■□□□□ 0.82
ILF3-221ENST00000591649 BAZ1AQ9NRL2 1556 aaPredicted RBP20.19■□□□□ 0.82
ILF3-221ENST00000591649 HIRIP3Q9BW71 556 aaPredicted RBP20.13■□□□□ 0.81
ILF3-221ENST00000591649 VPS8Q8N3P4 1428 aa20.13■□□□□ 0.81
ILF3-221ENST00000591649 IRX6P78412 446 aaPredicted RBP20.11■□□□□ 0.81
ILF3-221ENST00000591649 EEA1Q15075 1411 aa20.1■□□□□ 0.81
ILF3-221ENST00000591649 NACADO15069 1562 aa20.08■□□□□ 0.81
ILF3-221ENST00000591649 KANK4Q5T7N3 995 aaPredicted RBP20.07■□□□□ 0.8
ILF3-221ENST00000591649 DEKP35659 375 aaKnown RBP20.02■□□□□ 0.8
ILF3-221ENST00000591649 CEP164Q9UPV0 1460 aa19.99■□□□□ 0.79
ILF3-221ENST00000591649 ANO8Q9HCE9 1232 aaPredicted RBP19.99■□□□□ 0.79
ILF3-221ENST00000591649 SMARCA2P51531 1590 aa19.99■□□□□ 0.79
ILF3-221ENST00000591649 FANCIQ9NVI1 1328 aa19.98■□□□□ 0.79
ILF3-221ENST00000591649 RAPGEF2Q9Y4G8 1499 aa19.96■□□□□ 0.79
ILF3-221ENST00000591649 UBE2Q2Q8WVN8 375 aa19.95■□□□□ 0.78
ILF3-221ENST00000591649 TOP2AP11388 1531 aaKnown RBP19.95■□□□□ 0.78
ILF3-221ENST00000591649 SIN3AQ96ST3 1273 aa19.94■□□□□ 0.78
ILF3-221ENST00000591649 CDK11AQ9UQ88 783 aaPredicted RBP19.94■□□□□ 0.78
ILF3-221ENST00000591649 KIF21BO75037 1637 aa19.94■□□□□ 0.78
ILF3-221ENST00000591649 PPP1R15AO75807 674 aaPredicted RBP19.92■□□□□ 0.78
ILF3-221ENST00000591649 NBR1Q14596 966 aa19.9■□□□□ 0.78
ILF3-221ENST00000591649 ANP32CO43423 234 aa19.86■□□□□ 0.77
ILF3-221ENST00000591649 DAXXQ9UER7 740 aaPredicted RBP19.85■□□□□ 0.77
ILF3-221ENST00000591649 WDR97A6NE52 1622 aa19.84■□□□□ 0.77
ILF3-221ENST00000591649 RAB3GAP2Q9H2M9 1393 aa19.81■□□□□ 0.76
ILF3-221ENST00000591649 HNRNPUQ00839 825 aaKnown RBP eCLIP19.8■□□□□ 0.76
ILF3-221ENST00000591649 SALL2Q9Y467 1007 aaPredicted RBP19.79■□□□□ 0.76
ILF3-221ENST00000591649 SYNJ1O43426 1573 aa19.79■□□□□ 0.76
ILF3-221ENST00000591649 MAPKBP1O60336 1514 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms