RNA–Protein interactions for RNA: ENST00000591609.1

ZNF235-205, Transcript of zinc finger protein 235, humanhuman

TSL 4

Gene ZNF235, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF235-205ENST00000591609 NISCHQ9Y2I1 1504 aa46.17■■■■■ 4.98
ZNF235-205ENST00000591609 ABCC9O60706 1549 aa41.93■■■■■ 4.3
ZNF235-205ENST00000591609 CCDC180Q9P1Z9 1646 aa41.55■■■■■ 4.24
ZNF235-205ENST00000591609 RB1CC1Q8TDY2 1594 aa39.77■■■■□ 3.96
ZNF235-205ENST00000591609 DNAJC5BQ9UF47 199 aa39.6■■■■□ 3.93
ZNF235-205ENST00000591609 NACADO15069 1562 aa39.4■■■■□ 3.9
ZNF235-205ENST00000591609 DCAF8L2P0C7V8 631 aa39.3■■■■□ 3.88
ZNF235-205ENST00000591609 PABPN1Q86U42 306 aaKnown RBP eCLIP39.03■■■■□ 3.84
ZNF235-205ENST00000591609 UNC13AQ9UPW8 1703 aa38.77■■■■□ 3.8
ZNF235-205ENST00000591609 MYO15BQ96JP2 1530 aa38.72■■■■□ 3.79
ZNF235-205ENST00000591609 BICRAQ9NZM4 1560 aa38.53■■■■□ 3.76
ZNF235-205ENST00000591609 ZCCHC6Q5VYS8 1495 aaKnown RBP38.15■■■■□ 3.7
ZNF235-205ENST00000591609 DCAF1Q9Y4B6 1507 aa38.1■■■■□ 3.69
ZNF235-205ENST00000591609 SHROOM4Q9ULL8 1493 aa38.05■■■■□ 3.68
ZNF235-205ENST00000591609 SCRIBQ14160 1630 aa37.87■■■■□ 3.65
ZNF235-205ENST00000591609 CC2D2AQ9P2K1 1620 aa37.83■■■■□ 3.65
ZNF235-205ENST00000591609 CECR2Q9BXF3 1484 aa37.82■■■■□ 3.64
ZNF235-205ENST00000591609 EIF4G1Q04637 1599 aaKnown RBP37.66■■■■□ 3.62
ZNF235-205ENST00000591609 DNAJC5Q9H3Z4 198 aa36.67■■■■□ 3.46
ZNF235-205ENST00000591609 NCAPD3P42695 1498 aa36.37■■■■□ 3.41
ZNF235-205ENST00000591609 ERCC6Q03468 1493 aa36.3■■■■□ 3.4
ZNF235-205ENST00000591609 CUX2O14529 1486 aa36.28■■■■□ 3.4
ZNF235-205ENST00000591609 ATAD2BQ9ULI0 1458 aa36.21■■■■□ 3.39
ZNF235-205ENST00000591609 SMARCA2P51531 1590 aa36.12■■■■□ 3.37
ZNF235-205ENST00000591609 SMARCA4P51532 1647 aa36.07■■■■□ 3.36
ZNF235-205ENST00000591609 HMGXB3Q12766 1538 aa36.05■■■■□ 3.36
ZNF235-205ENST00000591609 NESP48681 1621 aa35.89■■■■□ 3.34
ZNF235-205ENST00000591609 BAZ1AQ9NRL2 1556 aaPredicted RBP35.89■■■■□ 3.34
ZNF235-205ENST00000591609 BAZ1BQ9UIG0 1483 aaKnown RBP35.88■■■■□ 3.33
ZNF235-205ENST00000591609 PEG3Q9GZU2 1588 aa35.7■■■■□ 3.31
ZNF235-205ENST00000591609 LAMC3Q9Y6N6 1575 aa35.61■■■■□ 3.29
ZNF235-205ENST00000591609 MROH2BQ7Z745 1585 aa35.55■■■■□ 3.28
ZNF235-205ENST00000591609 THOC2Q8NI27 1593 aaKnown RBP35.55■■■■□ 3.28
ZNF235-205ENST00000591609 PDS5BQ9NTI5 1447 aa35.49■■■■□ 3.27
ZNF235-205ENST00000591609 KIF21AQ7Z4S6 1674 aa35.4■■■■□ 3.26
ZNF235-205ENST00000591609 CADPSQ9ULU8 1353 aa35.29■■■■□ 3.24
ZNF235-205ENST00000591609 MRC2Q9UBG0 1479 aa35.15■■■■□ 3.22
ZNF235-205ENST00000591609 WIZO95785 1651 aa35.11■■■■□ 3.21
ZNF235-205ENST00000591609 WDR62O43379 1518 aa35.03■■■■□ 3.2
ZNF235-205ENST00000591609 TRIM41Q8WV44 630 aa34.99■■■■□ 3.19
ZNF235-205ENST00000591609 CEP164Q9UPV0 1460 aa34.96■■■■□ 3.19
ZNF235-205ENST00000591609 FANCD2Q9BXW9 1451 aa34.88■■■■□ 3.17
ZNF235-205ENST00000591609 CFTRP13569 1480 aa34.78■■■■□ 3.16
ZNF235-205ENST00000591609 RSF1Q96T23 1441 aaPredicted RBP34.72■■■■□ 3.15
ZNF235-205ENST00000591609 TOP2AP11388 1531 aaKnown RBP34.66■■■■□ 3.14
ZNF235-205ENST00000591609 OSCARQ8IYS5 282 aa34.66■■■■□ 3.14
ZNF235-205ENST00000591609 URB2Q14146 1524 aaKnown RBP34.57■■■■□ 3.12
ZNF235-205ENST00000591609 PRDM2Q13029 1718 aa34.35■■■■□ 3.09
ZNF235-205ENST00000591609 CCDC88BA6NC98 1476 aa34.29■■■■□ 3.08
ZNF235-205ENST00000591609 IFT140Q96RY7 1462 aa34.27■■■■□ 3.08
ZNF235-205ENST00000591609 ZNF608Q9ULD9 1512 aaPredicted RBP34.2■■■■□ 3.07
ZNF235-205ENST00000591609 TOPBP1Q92547 1522 aa34.16■■■■□ 3.06
ZNF235-205ENST00000591609 RIMBP3CA6NJZ7 1639 aa34.12■■■■□ 3.05
ZNF235-205ENST00000591609 RIMBP3BA6NNM3 1639 aa34.12■■■■□ 3.05
ZNF235-205ENST00000591609 RIMBP3Q9UFD9 1639 aa34.12■■■■□ 3.05
ZNF235-205ENST00000591609 ABCC8Q09428 1581 aa34.12■■■■□ 3.05
ZNF235-205ENST00000591609 DNMBPQ6XZF7 1577 aa34■■■■□ 3.03
ZNF235-205ENST00000591609 ARHGEF11O15085 1522 aa33.99■■■■□ 3.03
ZNF235-205ENST00000591609 EIF4G3O43432 1585 aaKnown RBP33.98■■■■□ 3.03
ZNF235-205ENST00000591609 AQRO60306 1485 aaKnown RBP eCLIP33.89■■■■□ 3.02
ZNF235-205ENST00000591609 CYB5RLQ6IPT4 315 aa33.86■■■■□ 3.01
ZNF235-205ENST00000591609 FBLN2P98095 1184 aa33.85■■■■□ 3.01
ZNF235-205ENST00000591609 TARBP1Q13395 1621 aaKnown RBP33.84■■■■□ 3.01
ZNF235-205ENST00000591609 CHD1O14646 1710 aa33.79■■■■□ 3
ZNF235-205ENST00000591609 POLA1P09884 1462 aaPredicted RBP33.78■■■■□ 3
ZNF235-205ENST00000591609 SOGA1O94964 1423 aa33.69■■■□□ 2.98
ZNF235-205ENST00000591609 RAD54L2Q9Y4B4 1467 aa33.68■■■□□ 2.98
ZNF235-205ENST00000591609 TDRD9Q8NDG6 1382 aaKnown RBP33.65■■■□□ 2.98
ZNF235-205ENST00000591609 TRHP20396 242 aaPredicted RBP33.65■■■□□ 2.98
ZNF235-205ENST00000591609 ARAP1Q96P48 1450 aa33.62■■■□□ 2.97
ZNF235-205ENST00000591609 CHMP7Q8WUX9 453 aaPredicted RBP33.54■■■□□ 2.96
ZNF235-205ENST00000591609 FGD5Q6ZNL6 1462 aa33.54■■■□□ 2.96
ZNF235-205ENST00000591609 SNAPC4Q5SXM2 1469 aa33.53■■■□□ 2.96
ZNF235-205ENST00000591609 WDR97A6NE52 1622 aa33.51■■■□□ 2.96
ZNF235-205ENST00000591609 MAGI1Q96QZ7 1491 aaPredicted RBP33.44■■■□□ 2.94
ZNF235-205ENST00000591609 CUX1P39880 1505 aa33.43■■■□□ 2.94
ZNF235-205ENST00000591609 SYNJ1O43426 1573 aa33.42■■■□□ 2.94
ZNF235-205ENST00000591609 GRIN2BQ13224 1484 aa33.41■■■□□ 2.94
ZNF235-205ENST00000591609 CLASP1Q7Z460 1538 aa33.39■■■□□ 2.94
ZNF235-205ENST00000591609 SYNJ2O15056 1496 aa33.33■■■□□ 2.93
ZNF235-205ENST00000591609 GAPVD1Q14C86 1478 aa33.25■■■□□ 2.91
ZNF235-205ENST00000591609 PBRM1Q86U86 1689 aa33.2■■■□□ 2.9
ZNF235-205ENST00000591609 ABCA10Q8WWZ4 1543 aa33.13■■■□□ 2.89
ZNF235-205ENST00000591609 ABCA5Q8WWZ7 1642 aa33.07■■■□□ 2.88
ZNF235-205ENST00000591609 SUPT5HO00267 1087 aaKnown RBP33.06■■■□□ 2.88
ZNF235-205ENST00000591609 WRNQ14191 1432 aaPredicted RBP eCLIP33■■■□□ 2.87
ZNF235-205ENST00000591609 GRIN2AQ12879 1464 aa32.96■■■□□ 2.87
ZNF235-205ENST00000591609 AEBP2Q6ZN18 517 aaPredicted RBP32.95■■■□□ 2.87
ZNF235-205ENST00000591609 ADAMTS12P58397 1594 aa32.86■■■□□ 2.85
ZNF235-205ENST00000591609 NUP160Q12769 1436 aa32.84■■■□□ 2.85
ZNF235-205ENST00000591609 ERCC6L2Q5T890 1561 aa32.83■■■□□ 2.85
ZNF235-205ENST00000591609 FHAD1B1AJZ9 1412 aa32.82■■■□□ 2.84
ZNF235-205ENST00000591609 CEP170Q5SW79 1584 aa32.82■■■□□ 2.84
ZNF235-205ENST00000591609 TOP2BQ02880 1626 aa32.81■■■□□ 2.84
ZNF235-205ENST00000591609 BIVM-ERCC5R4GMW8 1640 aa32.79■■■□□ 2.84
ZNF235-205ENST00000591609 ERICH3Q5RHP9 1530 aa32.72■■■□□ 2.83
ZNF235-205ENST00000591609 SHROOM2Q13796 1616 aa32.7■■■□□ 2.83
ZNF235-205ENST00000591609 PRG4Q92954 1404 aaPredicted RBP32.61■■■□□ 2.81
ZNF235-205ENST00000591609 JPH4Q96JJ6 628 aa32.59■■■□□ 2.81
ZNF235-205ENST00000591609 NPM1P06748 294 aaKnown RBP eCLIP32.47■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms