RNA–Protein interactions for RNA: ENST00000591574.5

CYTH1-216, Transcript of cytohesin 1, humanhuman

TSL 3

Gene CYTH1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH1-216ENST00000591574 NISCHQ9Y2I1 1504 aa60.42■■■■■ 7.26
CYTH1-216ENST00000591574 CCDC180Q9P1Z9 1646 aa54.08■■■■■ 6.25
CYTH1-216ENST00000591574 ABCC9O60706 1549 aa53.8■■■■■ 6.2
CYTH1-216ENST00000591574 RB1CC1Q8TDY2 1594 aa51.35■■■■■ 5.81
CYTH1-216ENST00000591574 NACADO15069 1562 aa51.06■■■■■ 5.77
CYTH1-216ENST00000591574 DCAF8L2P0C7V8 631 aa50.95■■■■■ 5.75
CYTH1-216ENST00000591574 MYO15BQ96JP2 1530 aa50.44■■■■■ 5.67
CYTH1-216ENST00000591574 UNC13AQ9UPW8 1703 aa50.17■■■■■ 5.62
CYTH1-216ENST00000591574 PABPN1Q86U42 306 aaKnown RBP eCLIP50.16■■■■■ 5.62
CYTH1-216ENST00000591574 DNAJC5BQ9UF47 199 aa50.16■■■■■ 5.62
CYTH1-216ENST00000591574 ZCCHC6Q5VYS8 1495 aaKnown RBP50.14■■■■■ 5.62
CYTH1-216ENST00000591574 DCAF1Q9Y4B6 1507 aa49.91■■■■■ 5.58
CYTH1-216ENST00000591574 BICRAQ9NZM4 1560 aa49.81■■■■■ 5.56
CYTH1-216ENST00000591574 SCRIBQ14160 1630 aa49.33■■■■■ 5.49
CYTH1-216ENST00000591574 SHROOM4Q9ULL8 1493 aa49.18■■■■■ 5.46
CYTH1-216ENST00000591574 CC2D2AQ9P2K1 1620 aa48.61■■■■■ 5.37
CYTH1-216ENST00000591574 EIF4G1Q04637 1599 aaKnown RBP48.58■■■■■ 5.37
CYTH1-216ENST00000591574 CECR2Q9BXF3 1484 aa48.43■■■■■ 5.34
CYTH1-216ENST00000591574 NCAPD3P42695 1498 aa47.13■■■■■ 5.13
CYTH1-216ENST00000591574 SMARCA4P51532 1647 aa47.08■■■■■ 5.13
CYTH1-216ENST00000591574 ATAD2BQ9ULI0 1458 aa47.04■■■■■ 5.12
CYTH1-216ENST00000591574 SMARCA2P51531 1590 aa46.94■■■■■ 5.1
CYTH1-216ENST00000591574 BAZ1AQ9NRL2 1556 aaPredicted RBP46.9■■■■■ 5.1
CYTH1-216ENST00000591574 HMGXB3Q12766 1538 aa46.81■■■■■ 5.08
CYTH1-216ENST00000591574 BAZ1BQ9UIG0 1483 aaKnown RBP46.63■■■■■ 5.05
CYTH1-216ENST00000591574 PEG3Q9GZU2 1588 aa46.59■■■■■ 5.05
CYTH1-216ENST00000591574 MROH2BQ7Z745 1585 aa46.56■■■■■ 5.04
CYTH1-216ENST00000591574 ERCC6Q03468 1493 aa46.46■■■■■ 5.03
CYTH1-216ENST00000591574 NESP48681 1621 aa46.3■■■■■ 5
CYTH1-216ENST00000591574 CUX2O14529 1486 aa46.23■■■■■ 4.99
CYTH1-216ENST00000591574 LAMC3Q9Y6N6 1575 aa46.03■■■■■ 4.96
CYTH1-216ENST00000591574 WIZO95785 1651 aa46.03■■■■■ 4.96
CYTH1-216ENST00000591574 DNAJC5Q9H3Z4 198 aa45.84■■■■■ 4.93
CYTH1-216ENST00000591574 PDS5BQ9NTI5 1447 aa45.77■■■■■ 4.92
CYTH1-216ENST00000591574 THOC2Q8NI27 1593 aaKnown RBP45.75■■■■■ 4.92
CYTH1-216ENST00000591574 CADPSQ9ULU8 1353 aa45.73■■■■■ 4.91
CYTH1-216ENST00000591574 RSF1Q96T23 1441 aaPredicted RBP45.72■■■■■ 4.91
CYTH1-216ENST00000591574 KIF21AQ7Z4S6 1674 aa45.72■■■■■ 4.91
CYTH1-216ENST00000591574 TOP2AP11388 1531 aaKnown RBP45.47■■■■■ 4.87
CYTH1-216ENST00000591574 MRC2Q9UBG0 1479 aa45.35■■■■■ 4.85
CYTH1-216ENST00000591574 CFTRP13569 1480 aa45.26■■■■■ 4.84
CYTH1-216ENST00000591574 CEP164Q9UPV0 1460 aa45.23■■■■■ 4.83
CYTH1-216ENST00000591574 FANCD2Q9BXW9 1451 aa45.22■■■■■ 4.83
CYTH1-216ENST00000591574 WDR62O43379 1518 aa45.21■■■■■ 4.83
CYTH1-216ENST00000591574 CCDC88BA6NC98 1476 aa44.96■■■■■ 4.79
CYTH1-216ENST00000591574 PRDM2Q13029 1718 aa44.84■■■■■ 4.77
CYTH1-216ENST00000591574 URB2Q14146 1524 aaKnown RBP44.8■■■■■ 4.76
CYTH1-216ENST00000591574 TOPBP1Q92547 1522 aa44.39■■■■■ 4.7
CYTH1-216ENST00000591574 ABCC8Q09428 1581 aa44.32■■■■■ 4.69
CYTH1-216ENST00000591574 IFT140Q96RY7 1462 aa44.32■■■■■ 4.69
CYTH1-216ENST00000591574 DNMBPQ6XZF7 1577 aa44.26■■■■■ 4.68
CYTH1-216ENST00000591574 ZNF608Q9ULD9 1512 aaPredicted RBP44.2■■■■■ 4.67
CYTH1-216ENST00000591574 OSCARQ8IYS5 282 aa44.2■■■■■ 4.67
CYTH1-216ENST00000591574 TRIM41Q8WV44 630 aa44.02■■■■■ 4.64
CYTH1-216ENST00000591574 SUPT5HO00267 1087 aaKnown RBP44■■■■■ 4.63
CYTH1-216ENST00000591574 EIF4G3O43432 1585 aaKnown RBP43.98■■■■■ 4.63
CYTH1-216ENST00000591574 POLA1P09884 1462 aaPredicted RBP43.96■■■■■ 4.63
CYTH1-216ENST00000591574 TARBP1Q13395 1621 aaKnown RBP43.95■■■■■ 4.63
CYTH1-216ENST00000591574 AQRO60306 1485 aaKnown RBP eCLIP43.86■■■■■ 4.619e-7■■■■■ 31.4
CYTH1-216ENST00000591574 RAD54L2Q9Y4B4 1467 aa43.8■■■■■ 4.6
CYTH1-216ENST00000591574 SOGA1O94964 1423 aa43.78■■■■■ 4.6
CYTH1-216ENST00000591574 CUX1P39880 1505 aa43.73■■■■■ 4.59
CYTH1-216ENST00000591574 FGD5Q6ZNL6 1462 aa43.73■■■■■ 4.59
CYTH1-216ENST00000591574 TDRD9Q8NDG6 1382 aaKnown RBP43.66■■■■■ 4.58
CYTH1-216ENST00000591574 CHD1O14646 1710 aa43.61■■■■■ 4.57
CYTH1-216ENST00000591574 RIMBP3CA6NJZ7 1639 aa43.56■■■■■ 4.56
CYTH1-216ENST00000591574 RIMBP3BA6NNM3 1639 aa43.56■■■■■ 4.56
CYTH1-216ENST00000591574 RIMBP3Q9UFD9 1639 aa43.56■■■■■ 4.56
CYTH1-216ENST00000591574 FBLN2P98095 1184 aa43.56■■■■■ 4.56
CYTH1-216ENST00000591574 WDR97A6NE52 1622 aa43.53■■■■■ 4.56
CYTH1-216ENST00000591574 ARHGEF11O15085 1522 aa43.47■■■■■ 4.55
CYTH1-216ENST00000591574 SNAPC4Q5SXM2 1469 aa43.42■■■■■ 4.54
CYTH1-216ENST00000591574 GRIN2BQ13224 1484 aa43.36■■■■■ 4.53
CYTH1-216ENST00000591574 MAGI1Q96QZ7 1491 aaPredicted RBP43.32■■■■■ 4.52
CYTH1-216ENST00000591574 CHMP7Q8WUX9 453 aaPredicted RBP43.28■■■■■ 4.52
CYTH1-216ENST00000591574 GAPVD1Q14C86 1478 aa43.25■■■■■ 4.51
CYTH1-216ENST00000591574 ABCA10Q8WWZ4 1543 aa43.25■■■■■ 4.51
CYTH1-216ENST00000591574 PBRM1Q86U86 1689 aa43.21■■■■■ 4.51
CYTH1-216ENST00000591574 SYNJ2O15056 1496 aa43.17■■■■■ 4.5
CYTH1-216ENST00000591574 CYB5RLQ6IPT4 315 aa43.16■■■■■ 4.5
CYTH1-216ENST00000591574 WRNQ14191 1432 aaPredicted RBP eCLIP43.15■■■■■ 4.52e-6■■■■■ 64.8
CYTH1-216ENST00000591574 ABCA5Q8WWZ7 1642 aa43.14■■■■■ 4.5
CYTH1-216ENST00000591574 SYNJ1O43426 1573 aa43.12■■■■■ 4.49
CYTH1-216ENST00000591574 TOP2BQ02880 1626 aa43.12■■■■■ 4.49
CYTH1-216ENST00000591574 BIVM-ERCC5R4GMW8 1640 aa43.11■■■■■ 4.49
CYTH1-216ENST00000591574 CLASP1Q7Z460 1538 aa43.09■■■■■ 4.49
CYTH1-216ENST00000591574 ARAP1Q96P48 1450 aa43.06■■■■■ 4.48
CYTH1-216ENST00000591574 ADAMTS12P58397 1594 aa42.81■■■■■ 4.44
CYTH1-216ENST00000591574 GRIN2AQ12879 1464 aa42.79■■■■■ 4.44
CYTH1-216ENST00000591574 FHAD1B1AJZ9 1412 aa42.71■■■■■ 4.43
CYTH1-216ENST00000591574 ERICH3Q5RHP9 1530 aa42.71■■■■■ 4.43
CYTH1-216ENST00000591574 NUP160Q12769 1436 aa42.63■■■■■ 4.41
CYTH1-216ENST00000591574 CEP170Q5SW79 1584 aa42.61■■■■■ 4.41
CYTH1-216ENST00000591574 TRHP20396 242 aaPredicted RBP42.61■■■■■ 4.41
CYTH1-216ENST00000591574 ERCC6L2Q5T890 1561 aa42.45■■■■■ 4.39
CYTH1-216ENST00000591574 SHROOM2Q13796 1616 aa42.39■■■■■ 4.38
CYTH1-216ENST00000591574 KIF27Q86VH2 1401 aa42.31■■■■■ 4.36
CYTH1-216ENST00000591574 IGF1RP08069 1367 aa42.25■■■■■ 4.35
CYTH1-216ENST00000591574 JPH4Q96JJ6 628 aa42.22■■■■■ 4.35
CYTH1-216ENST00000591574 PRG4Q92954 1404 aaPredicted RBP42.21■■■■■ 4.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms