RNA–Protein interactions for RNA: ENST00000591084.5

U2AF1L4-216, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 3

Gene U2AF1L4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-216ENST00000591084 NISCHQ9Y2I1 1504 aa32.96■■■□□ 2.87
U2AF1L4-216ENST00000591084 ABCC9O60706 1549 aa30.01■■■□□ 2.4
U2AF1L4-216ENST00000591084 CCDC180Q9P1Z9 1646 aa29.65■■■□□ 2.34
U2AF1L4-216ENST00000591084 DNAJC5BQ9UF47 199 aa28.46■■■□□ 2.15
U2AF1L4-216ENST00000591084 RB1CC1Q8TDY2 1594 aa28.37■■■□□ 2.13
U2AF1L4-216ENST00000591084 NACADO15069 1562 aa28.09■■■□□ 2.09
U2AF1L4-216ENST00000591084 DCAF8L2P0C7V8 631 aa28.05■■■□□ 2.08
U2AF1L4-216ENST00000591084 PABPN1Q86U42 306 aaKnown RBP eCLIP27.95■■■□□ 2.06
U2AF1L4-216ENST00000591084 UNC13AQ9UPW8 1703 aa27.83■■■□□ 2.05
U2AF1L4-216ENST00000591084 BICRAQ9NZM4 1560 aa27.61■■■□□ 2.01
U2AF1L4-216ENST00000591084 MYO15BQ96JP2 1530 aa27.57■■■□□ 2
U2AF1L4-216ENST00000591084 ZCCHC6Q5VYS8 1495 aaKnown RBP27.25■■□□□ 1.95
U2AF1L4-216ENST00000591084 DCAF1Q9Y4B6 1507 aa27.14■■□□□ 1.94
U2AF1L4-216ENST00000591084 SCRIBQ14160 1630 aa27.09■■□□□ 1.93
U2AF1L4-216ENST00000591084 CC2D2AQ9P2K1 1620 aa27.08■■□□□ 1.93
U2AF1L4-216ENST00000591084 SHROOM4Q9ULL8 1493 aa27.06■■□□□ 1.92
U2AF1L4-216ENST00000591084 CECR2Q9BXF3 1484 aa27.03■■□□□ 1.92
U2AF1L4-216ENST00000591084 EIF4G1Q04637 1599 aaKnown RBP26.92■■□□□ 1.9
U2AF1L4-216ENST00000591084 DNAJC5Q9H3Z4 198 aa26.24■■□□□ 1.79
U2AF1L4-216ENST00000591084 NCAPD3P42695 1498 aa25.95■■□□□ 1.74
U2AF1L4-216ENST00000591084 ERCC6Q03468 1493 aa25.89■■□□□ 1.73
U2AF1L4-216ENST00000591084 CUX2O14529 1486 aa25.88■■□□□ 1.73
U2AF1L4-216ENST00000591084 ATAD2BQ9ULI0 1458 aa25.87■■□□□ 1.73
U2AF1L4-216ENST00000591084 SMARCA4P51532 1647 aa25.78■■□□□ 1.72
U2AF1L4-216ENST00000591084 SMARCA2P51531 1590 aa25.74■■□□□ 1.71
U2AF1L4-216ENST00000591084 NESP48681 1621 aa25.74■■□□□ 1.71
U2AF1L4-216ENST00000591084 HMGXB3Q12766 1538 aa25.72■■□□□ 1.71
U2AF1L4-216ENST00000591084 BAZ1BQ9UIG0 1483 aaKnown RBP25.6■■□□□ 1.69
U2AF1L4-216ENST00000591084 BAZ1AQ9NRL2 1556 aaPredicted RBP25.57■■□□□ 1.68
U2AF1L4-216ENST00000591084 PEG3Q9GZU2 1588 aa25.48■■□□□ 1.67
U2AF1L4-216ENST00000591084 THOC2Q8NI27 1593 aaKnown RBP25.46■■□□□ 1.67
U2AF1L4-216ENST00000591084 MROH2BQ7Z745 1585 aa25.44■■□□□ 1.66
U2AF1L4-216ENST00000591084 LAMC3Q9Y6N6 1575 aa25.4■■□□□ 1.66
U2AF1L4-216ENST00000591084 KIF21AQ7Z4S6 1674 aa25.38■■□□□ 1.65
U2AF1L4-216ENST00000591084 PDS5BQ9NTI5 1447 aa25.27■■□□□ 1.64
U2AF1L4-216ENST00000591084 CADPSQ9ULU8 1353 aa25.17■■□□□ 1.62
U2AF1L4-216ENST00000591084 WIZO95785 1651 aa25.15■■□□□ 1.62
U2AF1L4-216ENST00000591084 MRC2Q9UBG0 1479 aa25.09■■□□□ 1.61
U2AF1L4-216ENST00000591084 TRIM41Q8WV44 630 aa25.05■■□□□ 1.6
U2AF1L4-216ENST00000591084 WDR62O43379 1518 aa25.02■■□□□ 1.6
U2AF1L4-216ENST00000591084 CEP164Q9UPV0 1460 aa24.93■■□□□ 1.58
U2AF1L4-216ENST00000591084 FANCD2Q9BXW9 1451 aa24.9■■□□□ 1.58
U2AF1L4-216ENST00000591084 CFTRP13569 1480 aa24.82■■□□□ 1.56
U2AF1L4-216ENST00000591084 RSF1Q96T23 1441 aaPredicted RBP24.8■■□□□ 1.56
U2AF1L4-216ENST00000591084 TOP2AP11388 1531 aaKnown RBP24.74■■□□□ 1.55
U2AF1L4-216ENST00000591084 URB2Q14146 1524 aaKnown RBP24.74■■□□□ 1.55
U2AF1L4-216ENST00000591084 OSCARQ8IYS5 282 aa24.71■■□□□ 1.55
U2AF1L4-216ENST00000591084 PRDM2Q13029 1718 aa24.57■■□□□ 1.52
U2AF1L4-216ENST00000591084 CCDC88BA6NC98 1476 aa24.51■■□□□ 1.51
U2AF1L4-216ENST00000591084 ZNF608Q9ULD9 1512 aaPredicted RBP24.5■■□□□ 1.51
U2AF1L4-216ENST00000591084 RIMBP3CA6NJZ7 1639 aa24.45■■□□□ 1.5
U2AF1L4-216ENST00000591084 RIMBP3BA6NNM3 1639 aa24.45■■□□□ 1.5
U2AF1L4-216ENST00000591084 RIMBP3Q9UFD9 1639 aa24.45■■□□□ 1.5
U2AF1L4-216ENST00000591084 IFT140Q96RY7 1462 aa24.43■■□□□ 1.5
U2AF1L4-216ENST00000591084 TOPBP1Q92547 1522 aa24.41■■□□□ 1.5
U2AF1L4-216ENST00000591084 ARHGEF11O15085 1522 aa24.31■■□□□ 1.48
U2AF1L4-216ENST00000591084 EIF4G3O43432 1585 aaKnown RBP24.31■■□□□ 1.48
U2AF1L4-216ENST00000591084 DNMBPQ6XZF7 1577 aa24.27■■□□□ 1.48
U2AF1L4-216ENST00000591084 ABCC8Q09428 1581 aa24.26■■□□□ 1.47
U2AF1L4-216ENST00000591084 AQRO60306 1485 aaKnown RBP eCLIP24.25■■□□□ 1.47
U2AF1L4-216ENST00000591084 CHD1O14646 1710 aa24.23■■□□□ 1.47
U2AF1L4-216ENST00000591084 TARBP1Q13395 1621 aaKnown RBP24.21■■□□□ 1.47
U2AF1L4-216ENST00000591084 CYB5RLQ6IPT4 315 aa24.2■■□□□ 1.46
U2AF1L4-216ENST00000591084 FBLN2P98095 1184 aa24.15■■□□□ 1.46
U2AF1L4-216ENST00000591084 POLA1P09884 1462 aaPredicted RBP24.13■■□□□ 1.45
U2AF1L4-216ENST00000591084 RAD54L2Q9Y4B4 1467 aa24.11■■□□□ 1.45
U2AF1L4-216ENST00000591084 ARAP1Q96P48 1450 aa24.07■■□□□ 1.44
U2AF1L4-216ENST00000591084 TDRD9Q8NDG6 1382 aaKnown RBP24.06■■□□□ 1.44
U2AF1L4-216ENST00000591084 SOGA1O94964 1423 aa24.03■■□□□ 1.44
U2AF1L4-216ENST00000591084 TRHP20396 242 aaPredicted RBP24.02■■□□□ 1.44
U2AF1L4-216ENST00000591084 SNAPC4Q5SXM2 1469 aa23.96■■□□□ 1.43
U2AF1L4-216ENST00000591084 FGD5Q6ZNL6 1462 aa23.96■■□□□ 1.43
U2AF1L4-216ENST00000591084 CUX1P39880 1505 aa23.91■■□□□ 1.42
U2AF1L4-216ENST00000591084 CHMP7Q8WUX9 453 aaPredicted RBP23.89■■□□□ 1.41
U2AF1L4-216ENST00000591084 CLASP1Q7Z460 1538 aa23.88■■□□□ 1.41
U2AF1L4-216ENST00000591084 WDR97A6NE52 1622 aa23.84■■□□□ 1.41
U2AF1L4-216ENST00000591084 SYNJ1O43426 1573 aa23.83■■□□□ 1.41
U2AF1L4-216ENST00000591084 GRIN2BQ13224 1484 aa23.82■■□□□ 1.4
U2AF1L4-216ENST00000591084 MAGI1Q96QZ7 1491 aaPredicted RBP23.82■■□□□ 1.4
U2AF1L4-216ENST00000591084 SYNJ2O15056 1496 aa23.77■■□□□ 1.4
U2AF1L4-216ENST00000591084 PBRM1Q86U86 1689 aa23.76■■□□□ 1.39
U2AF1L4-216ENST00000591084 GAPVD1Q14C86 1478 aa23.72■■□□□ 1.39
U2AF1L4-216ENST00000591084 ABCA5Q8WWZ7 1642 aa23.64■■□□□ 1.38
U2AF1L4-216ENST00000591084 ABCA10Q8WWZ4 1543 aa23.64■■□□□ 1.37
U2AF1L4-216ENST00000591084 SUPT5HO00267 1087 aaKnown RBP23.6■■□□□ 1.37
U2AF1L4-216ENST00000591084 ERCC6L2Q5T890 1561 aa23.57■■□□□ 1.36
U2AF1L4-216ENST00000591084 GRIN2AQ12879 1464 aa23.53■■□□□ 1.36
U2AF1L4-216ENST00000591084 WRNQ14191 1432 aaPredicted RBP eCLIP23.49■■□□□ 1.35
U2AF1L4-216ENST00000591084 ADAMTS12P58397 1594 aa23.48■■□□□ 1.35
U2AF1L4-216ENST00000591084 CEP170Q5SW79 1584 aa23.48■■□□□ 1.35
U2AF1L4-216ENST00000591084 AEBP2Q6ZN18 517 aaPredicted RBP23.48■■□□□ 1.35
U2AF1L4-216ENST00000591084 NUP160Q12769 1436 aa23.45■■□□□ 1.34
U2AF1L4-216ENST00000591084 BIVM-ERCC5R4GMW8 1640 aa23.43■■□□□ 1.34
U2AF1L4-216ENST00000591084 TOP2BQ02880 1626 aa23.42■■□□□ 1.34
U2AF1L4-216ENST00000591084 FHAD1B1AJZ9 1412 aa23.39■■□□□ 1.33
U2AF1L4-216ENST00000591084 SHROOM2Q13796 1616 aa23.38■■□□□ 1.33
U2AF1L4-216ENST00000591084 ERICH3Q5RHP9 1530 aa23.32■■□□□ 1.32
U2AF1L4-216ENST00000591084 PRG4Q92954 1404 aaPredicted RBP23.28■■□□□ 1.32
U2AF1L4-216ENST00000591084 KIF13AQ9H1H9 1805 aa23.27■■□□□ 1.32
U2AF1L4-216ENST00000591084 JPH4Q96JJ6 628 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms