RNA–Protein interactions for RNA: ENST00000590953.5

RANBP3-219, Transcript of RAN binding protein 3, humanhuman

TSL 3

Gene RANBP3, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-219ENST00000590953 NISCHQ9Y2I1 1504 aa23.65■■□□□ 1.38
RANBP3-219ENST00000590953 CCDC180Q9P1Z9 1646 aa20.94■□□□□ 0.94
RANBP3-219ENST00000590953 ABCC9O60706 1549 aa20.28■□□□□ 0.84
RANBP3-219ENST00000590953 ZCCHC6Q5VYS8 1495 aaKnown RBP19.74■□□□□ 0.75
RANBP3-219ENST00000590953 DCAF8L2P0C7V8 631 aa19.71■□□□□ 0.75
RANBP3-219ENST00000590953 NACADO15069 1562 aa19.66■□□□□ 0.74
RANBP3-219ENST00000590953 RB1CC1Q8TDY2 1594 aa19.63■□□□□ 0.73
RANBP3-219ENST00000590953 MYO15BQ96JP2 1530 aa19.61■□□□□ 0.73
RANBP3-219ENST00000590953 DCAF1Q9Y4B6 1507 aa19.61■□□□□ 0.73
RANBP3-219ENST00000590953 UNC13AQ9UPW8 1703 aa19.13■□□□□ 0.65
RANBP3-219ENST00000590953 SCRIBQ14160 1630 aa19.11■□□□□ 0.65
RANBP3-219ENST00000590953 PABPN1Q86U42 306 aaKnown RBP eCLIP19■□□□□ 0.63
RANBP3-219ENST00000590953 BICRAQ9NZM4 1560 aa18.98■□□□□ 0.63
RANBP3-219ENST00000590953 SHROOM4Q9ULL8 1493 aa18.87■□□□□ 0.61
RANBP3-219ENST00000590953 EIF4G1Q04637 1599 aaKnown RBP18.49■□□□□ 0.55
RANBP3-219ENST00000590953 DNAJC5BQ9UF47 199 aa18.41■□□□□ 0.54
RANBP3-219ENST00000590953 CECR2Q9BXF3 1484 aa18.38■□□□□ 0.53
RANBP3-219ENST00000590953 CC2D2AQ9P2K1 1620 aa18.36■□□□□ 0.53
RANBP3-219ENST00000590953 BAZ1AQ9NRL2 1556 aaPredicted RBP18.34■□□□□ 0.53
RANBP3-219ENST00000590953 SMARCA4P51532 1647 aa18.31■□□□□ 0.52
RANBP3-219ENST00000590953 MROH2BQ7Z745 1585 aa18.21■□□□□ 0.51
RANBP3-219ENST00000590953 SMARCA2P51531 1590 aa18.17■□□□□ 0.5
RANBP3-219ENST00000590953 ATAD2BQ9ULI0 1458 aa18.16■□□□□ 0.5
RANBP3-219ENST00000590953 NCAPD3P42695 1498 aa18.14■□□□□ 0.49
RANBP3-219ENST00000590953 PEG3Q9GZU2 1588 aa18.13■□□□□ 0.49
RANBP3-219ENST00000590953 RSF1Q96T23 1441 aaPredicted RBP18.09■□□□□ 0.49
RANBP3-219ENST00000590953 HMGXB3Q12766 1538 aa18.06■□□□□ 0.48
RANBP3-219ENST00000590953 BAZ1BQ9UIG0 1483 aaKnown RBP18.03■□□□□ 0.48
RANBP3-219ENST00000590953 WIZO95785 1651 aa18.03■□□□□ 0.48
RANBP3-219ENST00000590953 TOP2AP11388 1531 aaKnown RBP17.87■□□□□ 0.45
RANBP3-219ENST00000590953 SUPT5HO00267 1087 aaKnown RBP17.8■□□□□ 0.44
RANBP3-219ENST00000590953 CCDC88BA6NC98 1476 aa17.65■□□□□ 0.42
RANBP3-219ENST00000590953 CADPSQ9ULU8 1353 aa17.63■□□□□ 0.41
RANBP3-219ENST00000590953 LAMC3Q9Y6N6 1575 aa17.62■□□□□ 0.41
RANBP3-219ENST00000590953 NESP48681 1621 aa17.6■□□□□ 0.41
RANBP3-219ENST00000590953 CFTRP13569 1480 aa17.55■□□□□ 0.4
RANBP3-219ENST00000590953 PDS5BQ9NTI5 1447 aa17.53■□□□□ 0.4
RANBP3-219ENST00000590953 ERCC6Q03468 1493 aa17.5■□□□□ 0.39
RANBP3-219ENST00000590953 PRDM2Q13029 1718 aa17.41■□□□□ 0.38
RANBP3-219ENST00000590953 FANCD2Q9BXW9 1451 aa17.41■□□□□ 0.38
RANBP3-219ENST00000590953 KIF21AQ7Z4S6 1674 aa17.39■□□□□ 0.37
RANBP3-219ENST00000590953 CEP164Q9UPV0 1460 aa17.38■□□□□ 0.37
RANBP3-219ENST00000590953 MRC2Q9UBG0 1479 aa17.31■□□□□ 0.36
RANBP3-219ENST00000590953 THOC2Q8NI27 1593 aaKnown RBP17.29■□□□□ 0.36
RANBP3-219ENST00000590953 CUX2O14529 1486 aa17.24■□□□□ 0.35
RANBP3-219ENST00000590953 WDR62O43379 1518 aa17.23■□□□□ 0.35
RANBP3-219ENST00000590953 URB2Q14146 1524 aaKnown RBP17.21■□□□□ 0.34
RANBP3-219ENST00000590953 ABCC8Q09428 1581 aa17.2■□□□□ 0.34
RANBP3-219ENST00000590953 DNMBPQ6XZF7 1577 aa17.15■□□□□ 0.34
RANBP3-219ENST00000590953 TOPBP1Q92547 1522 aa17.14■□□□□ 0.33
RANBP3-219ENST00000590953 CUX1P39880 1505 aa17.08■□□□□ 0.32
RANBP3-219ENST00000590953 WRNQ14191 1432 aaPredicted RBP eCLIP17.07■□□□□ 0.325e-6■■■■■ 29.2
RANBP3-219ENST00000590953 POLA1P09884 1462 aaPredicted RBP17.02■□□□□ 0.32
RANBP3-219ENST00000590953 IFT140Q96RY7 1462 aa17.01■□□□□ 0.31
RANBP3-219ENST00000590953 FGD5Q6ZNL6 1462 aa17■□□□□ 0.31
RANBP3-219ENST00000590953 TOP2BQ02880 1626 aa17■□□□□ 0.31
RANBP3-219ENST00000590953 BIVM-ERCC5R4GMW8 1640 aa16.99■□□□□ 0.31
RANBP3-219ENST00000590953 SYNJ1O43426 1573 aa16.98■□□□□ 0.31
RANBP3-219ENST00000590953 SOGA1O94964 1423 aa16.96■□□□□ 0.31
RANBP3-219ENST00000590953 TARBP1Q13395 1621 aaKnown RBP16.93■□□□□ 0.3
RANBP3-219ENST00000590953 RAD54L2Q9Y4B4 1467 aa16.93■□□□□ 0.3
RANBP3-219ENST00000590953 ZNF608Q9ULD9 1512 aaPredicted RBP16.88■□□□□ 0.29
RANBP3-219ENST00000590953 ABCA10Q8WWZ4 1543 aa16.86■□□□□ 0.29
RANBP3-219ENST00000590953 WDR97A6NE52 1622 aa16.85■□□□□ 0.29
RANBP3-219ENST00000590953 EIF4G3O43432 1585 aaKnown RBP16.83■□□□□ 0.28
RANBP3-219ENST00000590953 TDRD9Q8NDG6 1382 aaKnown RBP16.83■□□□□ 0.28
RANBP3-219ENST00000590953 TRIM41Q8WV44 630 aa16.83■□□□□ 0.28
RANBP3-219ENST00000590953 AQRO60306 1485 aaKnown RBP eCLIP16.82■□□□□ 0.287e-8■■■■□ 25.8
RANBP3-219ENST00000590953 GAPVD1Q14C86 1478 aa16.78■□□□□ 0.28
RANBP3-219ENST00000590953 GRIN2BQ13224 1484 aa16.75■□□□□ 0.27
RANBP3-219ENST00000590953 ABCA5Q8WWZ7 1642 aa16.75■□□□□ 0.27
RANBP3-219ENST00000590953 CHIC1Q5VXU3 224 aa16.73■□□□□ 0.27
RANBP3-219ENST00000590953 KIF27Q86VH2 1401 aa16.72■□□□□ 0.27
RANBP3-219ENST00000590953 PBRM1Q86U86 1689 aa16.69■□□□□ 0.26
RANBP3-219ENST00000590953 SNAPC4Q5SXM2 1469 aa16.68■□□□□ 0.26
RANBP3-219ENST00000590953 MAGI1Q96QZ7 1491 aaPredicted RBP16.68■□□□□ 0.26
RANBP3-219ENST00000590953 ERICH3Q5RHP9 1530 aa16.67■□□□□ 0.26
RANBP3-219ENST00000590953 FBLN2P98095 1184 aa16.61■□□□□ 0.25
RANBP3-219ENST00000590953 CHMP7Q8WUX9 453 aaPredicted RBP16.61■□□□□ 0.25
RANBP3-219ENST00000590953 SYNJ2O15056 1496 aa16.61■□□□□ 0.25
RANBP3-219ENST00000590953 IGF1RP08069 1367 aa16.6■□□□□ 0.25
RANBP3-219ENST00000590953 FHAD1B1AJZ9 1412 aa16.6■□□□□ 0.25
RANBP3-219ENST00000590953 OSCARQ8IYS5 282 aa16.59■□□□□ 0.25
RANBP3-219ENST00000590953 ADAMTS12P58397 1594 aa16.58■□□□□ 0.24
RANBP3-219ENST00000590953 RUSC2Q8N2Y8 1516 aa16.57■□□□□ 0.24
RANBP3-219ENST00000590953 CHD1O14646 1710 aa16.56■□□□□ 0.24
RANBP3-219ENST00000590953 CUL7Q14999 1698 aa16.56■□□□□ 0.24
RANBP3-219ENST00000590953 EEA1Q15075 1411 aa16.55■□□□□ 0.24
RANBP3-219ENST00000590953 CARMIL1Q5VZK9 1371 aa16.52■□□□□ 0.24
RANBP3-219ENST00000590953 GRIN2AQ12879 1464 aa16.52■□□□□ 0.23
RANBP3-219ENST00000590953 CSRNP3Q8WYN3 585 aa16.48■□□□□ 0.23
RANBP3-219ENST00000590953 DNAJC5Q9H3Z4 198 aa16.47■□□□□ 0.23
RANBP3-219ENST00000590953 RAPGEF2Q9Y4G8 1499 aa16.45■□□□□ 0.22
RANBP3-219ENST00000590953 FAM9AQ8IZU1 332 aaPredicted RBP16.44■□□□□ 0.22
RANBP3-219ENST00000590953 NUP160Q12769 1436 aa16.44■□□□□ 0.22
RANBP3-219ENST00000590953 PRXQ9BXM0 1461 aa16.42■□□□□ 0.22
RANBP3-219ENST00000590953 CLASP1Q7Z460 1538 aa16.4■□□□□ 0.22
RANBP3-219ENST00000590953 CEP170Q5SW79 1584 aa16.4■□□□□ 0.22
RANBP3-219ENST00000590953 KIAA0586Q9BVV6 1533 aa16.35■□□□□ 0.21
RANBP3-219ENST00000590953 KIF21BO75037 1637 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms