RNA–Protein interactions for RNA: ENST00000590935.1

DUSP3-204, Transcript of dual specificity phosphatase 3, humanhuman

TSL 5

Gene DUSP3, Length 3,666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP3-204ENST00000590935 NISCHQ9Y2I1 1504 aa19.67■□□□□ 0.74
DUSP3-204ENST00000590935 CCDC180Q9P1Z9 1646 aa17.09■□□□□ 0.33
DUSP3-204ENST00000590935 DCAF8L2P0C7V8 631 aa16.59■□□□□ 0.25
DUSP3-204ENST00000590935 ABCC9O60706 1549 aa16.52■□□□□ 0.23
DUSP3-204ENST00000590935 ZCCHC6Q5VYS8 1495 aaKnown RBP16.47■□□□□ 0.23
DUSP3-204ENST00000590935 DCAF1Q9Y4B6 1507 aa16.17■□□□□ 0.18
DUSP3-204ENST00000590935 SHROOM4Q9ULL8 1493 aa16.16■□□□□ 0.18
DUSP3-204ENST00000590935 NACADO15069 1562 aa16.03■□□□□ 0.16
DUSP3-204ENST00000590935 MYO15BQ96JP2 1530 aa16.02■□□□□ 0.16
DUSP3-204ENST00000590935 RB1CC1Q8TDY2 1594 aa15.94■□□□□ 0.14
DUSP3-204ENST00000590935 SCRIBQ14160 1630 aa15.85■□□□□ 0.13
DUSP3-204ENST00000590935 PABPN1Q86U42 306 aaKnown RBP eCLIP15.64■□□□□ 0.09
DUSP3-204ENST00000590935 UNC13AQ9UPW8 1703 aa15.55■□□□□ 0.08
DUSP3-204ENST00000590935 SUPT5HO00267 1087 aaKnown RBP15.52■□□□□ 0.07
DUSP3-204ENST00000590935 BICRAQ9NZM4 1560 aa15.45■□□□□ 0.06
DUSP3-204ENST00000590935 CECR2Q9BXF3 1484 aa15.37■□□□□ 0.05
DUSP3-204ENST00000590935 RSF1Q96T23 1441 aaPredicted RBP15.26■□□□□ 0.03
DUSP3-204ENST00000590935 MROH2BQ7Z745 1585 aa15.23■□□□□ 0.03
DUSP3-204ENST00000590935 BAZ1AQ9NRL2 1556 aaPredicted RBP15.19■□□□□ 0.02
DUSP3-204ENST00000590935 SMARCA4P51532 1647 aa15.12■□□□□ 0.01
DUSP3-204ENST00000590935 WIZO95785 1651 aa15.08■□□□□ 0
DUSP3-204ENST00000590935 EIF4G1Q04637 1599 aaKnown RBP15.03■□□□□ -0
DUSP3-204ENST00000590935 ATAD2BQ9ULI0 1458 aa14.96□□□□□ -0.01
DUSP3-204ENST00000590935 SMARCA2P51531 1590 aa14.91□□□□□ -0.02
DUSP3-204ENST00000590935 BAZ1BQ9UIG0 1483 aaKnown RBP14.89□□□□□ -0.03
DUSP3-204ENST00000590935 PEG3Q9GZU2 1588 aa14.89□□□□□ -0.03
DUSP3-204ENST00000590935 TOP2AP11388 1531 aaKnown RBP14.87□□□□□ -0.03
DUSP3-204ENST00000590935 CC2D2AQ9P2K1 1620 aa14.85□□□□□ -0.03
DUSP3-204ENST00000590935 NCAPD3P42695 1498 aa14.84□□□□□ -0.03
DUSP3-204ENST00000590935 CCDC88BA6NC98 1476 aa14.79□□□□□ -0.04
DUSP3-204ENST00000590935 DNAJC5BQ9UF47 199 aa14.75□□□□□ -0.05
DUSP3-204ENST00000590935 HMGXB3Q12766 1538 aa14.74□□□□□ -0.05
DUSP3-204ENST00000590935 CHIC1Q5VXU3 224 aa14.69□□□□□ -0.06
DUSP3-204ENST00000590935 TRIM41Q8WV44 630 aa14.55□□□□□ -0.08
DUSP3-204ENST00000590935 CADPSQ9ULU8 1353 aa14.5□□□□□ -0.09
DUSP3-204ENST00000590935 CFTRP13569 1480 aa14.48□□□□□ -0.09
DUSP3-204ENST00000590935 ABCC8Q09428 1581 aa14.45□□□□□ -0.1
DUSP3-204ENST00000590935 NESP48681 1621 aa14.44□□□□□ -0.1
DUSP3-204ENST00000590935 WRNQ14191 1432 aaPredicted RBP eCLIP14.38□□□□□ -0.11
DUSP3-204ENST00000590935 FAM9AQ8IZU1 332 aaPredicted RBP14.36□□□□□ -0.11
DUSP3-204ENST00000590935 FANCD2Q9BXW9 1451 aa14.33□□□□□ -0.12
DUSP3-204ENST00000590935 LAMC3Q9Y6N6 1575 aa14.32□□□□□ -0.12
DUSP3-204ENST00000590935 PDS5BQ9NTI5 1447 aa14.29□□□□□ -0.12
DUSP3-204ENST00000590935 SYNJ1O43426 1573 aa14.27□□□□□ -0.13
DUSP3-204ENST00000590935 CEP164Q9UPV0 1460 aa14.24□□□□□ -0.13
DUSP3-204ENST00000590935 PRDM2Q13029 1718 aa14.24□□□□□ -0.13
DUSP3-204ENST00000590935 EHMT2Q96KQ7 1210 aa14.23□□□□□ -0.13
DUSP3-204ENST00000590935 CUX1P39880 1505 aa14.23□□□□□ -0.13
DUSP3-204ENST00000590935 LOC105371045A0A1W2PR82 267 aa14.2□□□□□ -0.14
DUSP3-204ENST00000590935 TOP2BQ02880 1626 aa14.19□□□□□ -0.14
DUSP3-204ENST00000590935 SOGA1O94964 1423 aa14.19□□□□□ -0.14
DUSP3-204ENST00000590935 ERCC6Q03468 1493 aa14.18□□□□□ -0.14
DUSP3-204ENST00000590935 HRCP23327 699 aa14.17□□□□□ -0.14
DUSP3-204ENST00000590935 KIF21AQ7Z4S6 1674 aa14.16□□□□□ -0.14
DUSP3-204ENST00000590935 RUSC2Q8N2Y8 1516 aa14.14□□□□□ -0.15
DUSP3-204ENST00000590935 BIVM-ERCC5R4GMW8 1640 aa14.14□□□□□ -0.15
DUSP3-204ENST00000590935 URB2Q14146 1524 aaKnown RBP14.13□□□□□ -0.15
DUSP3-204ENST00000590935 TOPBP1Q92547 1522 aa14.13□□□□□ -0.15
DUSP3-204ENST00000590935 FGD5Q6ZNL6 1462 aa14.12□□□□□ -0.15
DUSP3-204ENST00000590935 DNMBPQ6XZF7 1577 aa14.11□□□□□ -0.15
DUSP3-204ENST00000590935 CSRNP3Q8WYN3 585 aa14.11□□□□□ -0.15
DUSP3-204ENST00000590935 PCGF6Q9BYE7 350 aa14.11□□□□□ -0.15
DUSP3-204ENST00000590935 MRC2Q9UBG0 1479 aa14.08□□□□□ -0.15
DUSP3-204ENST00000590935 RAD54L2Q9Y4B4 1467 aa14.07□□□□□ -0.16
DUSP3-204ENST00000590935 POLA1P09884 1462 aaPredicted RBP14.07□□□□□ -0.16
DUSP3-204ENST00000590935 EEA1Q15075 1411 aa14.04□□□□□ -0.16
DUSP3-204ENST00000590935 CUX2O14529 1486 aa14.04□□□□□ -0.16
DUSP3-204ENST00000590935 KIF27Q86VH2 1401 aa14.03□□□□□ -0.16
DUSP3-204ENST00000590935 TDRD9Q8NDG6 1382 aaKnown RBP13.99□□□□□ -0.17
DUSP3-204ENST00000590935 UBTFP17480 764 aaKnown RBP13.99□□□□□ -0.17
DUSP3-204ENST00000590935 PPARGC1BQ86YN6 1023 aaKnown RBP13.97□□□□□ -0.17
DUSP3-204ENST00000590935 WDR62O43379 1518 aa13.97□□□□□ -0.17
DUSP3-204ENST00000590935 ABCA10Q8WWZ4 1543 aa13.95□□□□□ -0.18
DUSP3-204ENST00000590935 THOC2Q8NI27 1593 aaKnown RBP13.94□□□□□ -0.18
DUSP3-204ENST00000590935 IGF1RP08069 1367 aa13.94□□□□□ -0.18
DUSP3-204ENST00000590935 AQRO60306 1485 aaKnown RBP eCLIP13.9□□□□□ -0.18
DUSP3-204ENST00000590935 IFT140Q96RY7 1462 aa13.89□□□□□ -0.19
DUSP3-204ENST00000590935 RANGAP1P46060 587 aaPredicted RBP13.89□□□□□ -0.19
DUSP3-204ENST00000590935 GAPVD1Q14C86 1478 aa13.88□□□□□ -0.19
DUSP3-204ENST00000590935 RAPGEF2Q9Y4G8 1499 aa13.88□□□□□ -0.19
DUSP3-204ENST00000590935 CARMIL1Q5VZK9 1371 aa13.88□□□□□ -0.19
DUSP3-204ENST00000590935 GOLGA3Q08378 1498 aa13.88□□□□□ -0.19
DUSP3-204ENST00000590935 TARBP1Q13395 1621 aaKnown RBP13.87□□□□□ -0.19
DUSP3-204ENST00000590935 ZNF608Q9ULD9 1512 aaPredicted RBP13.87□□□□□ -0.19
DUSP3-204ENST00000590935 PRXQ9BXM0 1461 aa13.86□□□□□ -0.19
DUSP3-204ENST00000590935 WDR97A6NE52 1622 aa13.82□□□□□ -0.2
DUSP3-204ENST00000590935 TNIKQ9UKE5 1360 aa13.82□□□□□ -0.2
DUSP3-204ENST00000590935 KIF21BO75037 1637 aa13.82□□□□□ -0.2
DUSP3-204ENST00000590935 ABCA5Q8WWZ7 1642 aa13.8□□□□□ -0.2
DUSP3-204ENST00000590935 GRIN2BQ13224 1484 aa13.78□□□□□ -0.2
DUSP3-204ENST00000590935 FBLN2P98095 1184 aa13.77□□□□□ -0.21
DUSP3-204ENST00000590935 ERICH3Q5RHP9 1530 aa13.77□□□□□ -0.21
DUSP3-204ENST00000590935 CEP162Q5TB80 1403 aa13.75□□□□□ -0.21
DUSP3-204ENST00000590935 EIF4G3O43432 1585 aaKnown RBP13.74□□□□□ -0.21
DUSP3-204ENST00000590935 CHMP7Q8WUX9 453 aaPredicted RBP13.72□□□□□ -0.21
DUSP3-204ENST00000590935 SNAPC4Q5SXM2 1469 aa13.72□□□□□ -0.21
DUSP3-204ENST00000590935 FHAD1B1AJZ9 1412 aa13.71□□□□□ -0.21
DUSP3-204ENST00000590935 CUL7Q14999 1698 aa13.71□□□□□ -0.21
DUSP3-204ENST00000590935 TRIM26Q12899 539 aaPredicted RBP13.71□□□□□ -0.22
DUSP3-204ENST00000590935 PBRM1Q86U86 1689 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms