RNA–Protein interactions for RNA: ENST00000590909.1

MARK4-207, Transcript of microtubule affinity regulating kinase 4, humanhuman

TSL 5

Gene MARK4, Length 594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK4-207ENST00000590909 NISCHQ9Y2I1 1504 aa30.91■■■□□ 2.54
MARK4-207ENST00000590909 CCDC180Q9P1Z9 1646 aa27.6■■■□□ 2.01
MARK4-207ENST00000590909 ABCC9O60706 1549 aa27.5■■□□□ 1.99
MARK4-207ENST00000590909 RB1CC1Q8TDY2 1594 aa26.2■■□□□ 1.79
MARK4-207ENST00000590909 NACADO15069 1562 aa26.08■■□□□ 1.77
MARK4-207ENST00000590909 DCAF8L2P0C7V8 631 aa25.98■■□□□ 1.75
MARK4-207ENST00000590909 MYO15BQ96JP2 1530 aa25.81■■□□□ 1.72
MARK4-207ENST00000590909 DNAJC5BQ9UF47 199 aa25.76■■□□□ 1.71
MARK4-207ENST00000590909 PABPN1Q86U42 306 aaKnown RBP eCLIP25.66■■□□□ 1.7
MARK4-207ENST00000590909 ZCCHC6Q5VYS8 1495 aaKnown RBP25.65■■□□□ 1.7
MARK4-207ENST00000590909 UNC13AQ9UPW8 1703 aa25.61■■□□□ 1.69
MARK4-207ENST00000590909 DCAF1Q9Y4B6 1507 aa25.53■■□□□ 1.68
MARK4-207ENST00000590909 BICRAQ9NZM4 1560 aa25.5■■□□□ 1.67
MARK4-207ENST00000590909 SCRIBQ14160 1630 aa25.18■■□□□ 1.62
MARK4-207ENST00000590909 SHROOM4Q9ULL8 1493 aa25.13■■□□□ 1.61
MARK4-207ENST00000590909 CC2D2AQ9P2K1 1620 aa24.83■■□□□ 1.57
MARK4-207ENST00000590909 EIF4G1Q04637 1599 aaKnown RBP24.83■■□□□ 1.57
MARK4-207ENST00000590909 CECR2Q9BXF3 1484 aa24.76■■□□□ 1.55
MARK4-207ENST00000590909 NCAPD3P42695 1498 aa24.13■■□□□ 1.45
MARK4-207ENST00000590909 ATAD2BQ9ULI0 1458 aa24.07■■□□□ 1.44
MARK4-207ENST00000590909 SMARCA4P51532 1647 aa24.05■■□□□ 1.44
MARK4-207ENST00000590909 SMARCA2P51531 1590 aa23.96■■□□□ 1.43
MARK4-207ENST00000590909 BAZ1AQ9NRL2 1556 aaPredicted RBP23.95■■□□□ 1.42
MARK4-207ENST00000590909 HMGXB3Q12766 1538 aa23.92■■□□□ 1.42
MARK4-207ENST00000590909 PEG3Q9GZU2 1588 aa23.84■■□□□ 1.41
MARK4-207ENST00000590909 MROH2BQ7Z745 1585 aa23.83■■□□□ 1.41
MARK4-207ENST00000590909 BAZ1BQ9UIG0 1483 aaKnown RBP23.8■■□□□ 1.4
MARK4-207ENST00000590909 NESP48681 1621 aa23.7■■□□□ 1.38
MARK4-207ENST00000590909 ERCC6Q03468 1493 aa23.68■■□□□ 1.38
MARK4-207ENST00000590909 CUX2O14529 1486 aa23.62■■□□□ 1.37
MARK4-207ENST00000590909 WIZO95785 1651 aa23.51■■□□□ 1.35
MARK4-207ENST00000590909 LAMC3Q9Y6N6 1575 aa23.49■■□□□ 1.35
MARK4-207ENST00000590909 DNAJC5Q9H3Z4 198 aa23.49■■□□□ 1.35
MARK4-207ENST00000590909 RSF1Q96T23 1441 aaPredicted RBP23.41■■□□□ 1.34
MARK4-207ENST00000590909 CADPSQ9ULU8 1353 aa23.4■■□□□ 1.34
MARK4-207ENST00000590909 THOC2Q8NI27 1593 aaKnown RBP23.39■■□□□ 1.33
MARK4-207ENST00000590909 PDS5BQ9NTI5 1447 aa23.37■■□□□ 1.33
MARK4-207ENST00000590909 KIF21AQ7Z4S6 1674 aa23.32■■□□□ 1.32
MARK4-207ENST00000590909 TOP2AP11388 1531 aaKnown RBP23.23■■□□□ 1.31
MARK4-207ENST00000590909 MRC2Q9UBG0 1479 aa23.17■■□□□ 1.3
MARK4-207ENST00000590909 CFTRP13569 1480 aa23.16■■□□□ 1.3
MARK4-207ENST00000590909 WDR62O43379 1518 aa23.11■■□□□ 1.29
MARK4-207ENST00000590909 FANCD2Q9BXW9 1451 aa23.11■■□□□ 1.29
MARK4-207ENST00000590909 CEP164Q9UPV0 1460 aa23.09■■□□□ 1.29
MARK4-207ENST00000590909 CCDC88BA6NC98 1476 aa23■■□□□ 1.27
MARK4-207ENST00000590909 URB2Q14146 1524 aaKnown RBP22.93■■□□□ 1.26
MARK4-207ENST00000590909 PRDM2Q13029 1718 aa22.84■■□□□ 1.25
MARK4-207ENST00000590909 TOPBP1Q92547 1522 aa22.69■■□□□ 1.22
MARK4-207ENST00000590909 IFT140Q96RY7 1462 aa22.65■■□□□ 1.22
MARK4-207ENST00000590909 ZNF608Q9ULD9 1512 aaPredicted RBP22.63■■□□□ 1.21
MARK4-207ENST00000590909 ABCC8Q09428 1581 aa22.62■■□□□ 1.21
MARK4-207ENST00000590909 DNMBPQ6XZF7 1577 aa22.6■■□□□ 1.21
MARK4-207ENST00000590909 OSCARQ8IYS5 282 aa22.59■■□□□ 1.21
MARK4-207ENST00000590909 TARBP1Q13395 1621 aaKnown RBP22.48■■□□□ 1.19
MARK4-207ENST00000590909 POLA1P09884 1462 aaPredicted RBP22.47■■□□□ 1.19
MARK4-207ENST00000590909 TRIM41Q8WV44 630 aa22.46■■□□□ 1.19
MARK4-207ENST00000590909 SUPT5HO00267 1087 aaKnown RBP22.45■■□□□ 1.18
MARK4-207ENST00000590909 EIF4G3O43432 1585 aaKnown RBP22.45■■□□□ 1.18
MARK4-207ENST00000590909 AQRO60306 1485 aaKnown RBP eCLIP22.44■■□□□ 1.186e-7■■■■■ 26.9
MARK4-207ENST00000590909 RAD54L2Q9Y4B4 1467 aa22.41■■□□□ 1.18
MARK4-207ENST00000590909 CUX1P39880 1505 aa22.37■■□□□ 1.17
MARK4-207ENST00000590909 SOGA1O94964 1423 aa22.37■■□□□ 1.17
MARK4-207ENST00000590909 FGD5Q6ZNL6 1462 aa22.34■■□□□ 1.17
MARK4-207ENST00000590909 TDRD9Q8NDG6 1382 aaKnown RBP22.32■■□□□ 1.16
MARK4-207ENST00000590909 RIMBP3CA6NJZ7 1639 aa22.25■■□□□ 1.15
MARK4-207ENST00000590909 RIMBP3BA6NNM3 1639 aa22.25■■□□□ 1.15
MARK4-207ENST00000590909 RIMBP3Q9UFD9 1639 aa22.25■■□□□ 1.15
MARK4-207ENST00000590909 CHD1O14646 1710 aa22.24■■□□□ 1.15
MARK4-207ENST00000590909 ARHGEF11O15085 1522 aa22.21■■□□□ 1.15
MARK4-207ENST00000590909 WDR97A6NE52 1622 aa22.21■■□□□ 1.15
MARK4-207ENST00000590909 FBLN2P98095 1184 aa22.2■■□□□ 1.14
MARK4-207ENST00000590909 SNAPC4Q5SXM2 1469 aa22.19■■□□□ 1.14
MARK4-207ENST00000590909 GRIN2BQ13224 1484 aa22.15■■□□□ 1.14
MARK4-207ENST00000590909 MAGI1Q96QZ7 1491 aaPredicted RBP22.13■■□□□ 1.13
MARK4-207ENST00000590909 ABCA10Q8WWZ4 1543 aa22.11■■□□□ 1.13
MARK4-207ENST00000590909 GAPVD1Q14C86 1478 aa22.09■■□□□ 1.13
MARK4-207ENST00000590909 CHMP7Q8WUX9 453 aaPredicted RBP22.09■■□□□ 1.13
MARK4-207ENST00000590909 SYNJ2O15056 1496 aa22.05■■□□□ 1.12
MARK4-207ENST00000590909 CYB5RLQ6IPT4 315 aa22.05■■□□□ 1.12
MARK4-207ENST00000590909 ABCA5Q8WWZ7 1642 aa22.05■■□□□ 1.12
MARK4-207ENST00000590909 CLASP1Q7Z460 1538 aa22.05■■□□□ 1.12
MARK4-207ENST00000590909 WRNQ14191 1432 aaPredicted RBP eCLIP22.04■■□□□ 1.12
MARK4-207ENST00000590909 ARAP1Q96P48 1450 aa22.03■■□□□ 1.12
MARK4-207ENST00000590909 TOP2BQ02880 1626 aa22.02■■□□□ 1.12
MARK4-207ENST00000590909 SYNJ1O43426 1573 aa22.02■■□□□ 1.12
MARK4-207ENST00000590909 PBRM1Q86U86 1689 aa22.01■■□□□ 1.11
MARK4-207ENST00000590909 BIVM-ERCC5R4GMW8 1640 aa22.01■■□□□ 1.11
MARK4-207ENST00000590909 ADAMTS12P58397 1594 aa21.87■■□□□ 1.09
MARK4-207ENST00000590909 GRIN2AQ12879 1464 aa21.86■■□□□ 1.09
MARK4-207ENST00000590909 FHAD1B1AJZ9 1412 aa21.82■■□□□ 1.08
MARK4-207ENST00000590909 ERICH3Q5RHP9 1530 aa21.82■■□□□ 1.08
MARK4-207ENST00000590909 NUP160Q12769 1436 aa21.81■■□□□ 1.08
MARK4-207ENST00000590909 CEP170Q5SW79 1584 aa21.78■■□□□ 1.08
MARK4-207ENST00000590909 ERCC6L2Q5T890 1561 aa21.74■■□□□ 1.07
MARK4-207ENST00000590909 TRHP20396 242 aaPredicted RBP21.7■■□□□ 1.06
MARK4-207ENST00000590909 SHROOM2Q13796 1616 aa21.67■■□□□ 1.06
MARK4-207ENST00000590909 IGF1RP08069 1367 aa21.63■■□□□ 1.05
MARK4-207ENST00000590909 KIF27Q86VH2 1401 aa21.6■■□□□ 1.05
MARK4-207ENST00000590909 JPH4Q96JJ6 628 aa21.59■■□□□ 1.05
MARK4-207ENST00000590909 PRG4Q92954 1404 aaPredicted RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms