RNA–Protein interactions for RNA: ENST00000590881.1

RAD23A-206, Transcript of RAD23 homolog A, nucleotide excision repair protein, humanhuman

TSL 5

Gene RAD23A, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23A-206ENST00000590881 NISCHQ9Y2I1 1504 aa33.18■■■□□ 2.9
RAD23A-206ENST00000590881 CCDC180Q9P1Z9 1646 aa29.49■■■□□ 2.31
RAD23A-206ENST00000590881 ABCC9O60706 1549 aa28.53■■■□□ 2.16
RAD23A-206ENST00000590881 ZCCHC6Q5VYS8 1495 aaKnown RBP27.7■■■□□ 2.03
RAD23A-206ENST00000590881 NACADO15069 1562 aa27.6■■■□□ 2.01
RAD23A-206ENST00000590881 RB1CC1Q8TDY2 1594 aa27.57■■■□□ 2
RAD23A-206ENST00000590881 MYO15BQ96JP2 1530 aa27.51■■□□□ 1.99
RAD23A-206ENST00000590881 DCAF1Q9Y4B6 1507 aa27.48■■□□□ 1.99
RAD23A-206ENST00000590881 DCAF8L2P0C7V8 631 aa27.47■■□□□ 1.99
RAD23A-206ENST00000590881 UNC13AQ9UPW8 1703 aa27.14■■□□□ 1.94
RAD23A-206ENST00000590881 SCRIBQ14160 1630 aa26.87■■□□□ 1.89
RAD23A-206ENST00000590881 BICRAQ9NZM4 1560 aa26.8■■□□□ 1.88
RAD23A-206ENST00000590881 PABPN1Q86U42 306 aaKnown RBP eCLIP26.64■■□□□ 1.86
RAD23A-206ENST00000590881 SHROOM4Q9ULL8 1493 aa26.46■■□□□ 1.83
RAD23A-206ENST00000590881 EIF4G1Q04637 1599 aaKnown RBP26.03■■□□□ 1.76
RAD23A-206ENST00000590881 DNAJC5BQ9UF47 199 aa25.98■■□□□ 1.75
RAD23A-206ENST00000590881 CC2D2AQ9P2K1 1620 aa25.88■■□□□ 1.73
RAD23A-206ENST00000590881 CECR2Q9BXF3 1484 aa25.83■■□□□ 1.73
RAD23A-206ENST00000590881 SMARCA4P51532 1647 aa25.74■■□□□ 1.71
RAD23A-206ENST00000590881 BAZ1AQ9NRL2 1556 aaPredicted RBP25.7■■□□□ 1.71
RAD23A-206ENST00000590881 MROH2BQ7Z745 1585 aa25.59■■□□□ 1.69
RAD23A-206ENST00000590881 PEG3Q9GZU2 1588 aa25.49■■□□□ 1.67
RAD23A-206ENST00000590881 ATAD2BQ9ULI0 1458 aa25.48■■□□□ 1.67
RAD23A-206ENST00000590881 SMARCA2P51531 1590 aa25.48■■□□□ 1.67
RAD23A-206ENST00000590881 NCAPD3P42695 1498 aa25.43■■□□□ 1.66
RAD23A-206ENST00000590881 WIZO95785 1651 aa25.38■■□□□ 1.65
RAD23A-206ENST00000590881 HMGXB3Q12766 1538 aa25.37■■□□□ 1.65
RAD23A-206ENST00000590881 RSF1Q96T23 1441 aaPredicted RBP25.34■■□□□ 1.65
RAD23A-206ENST00000590881 BAZ1BQ9UIG0 1483 aaKnown RBP25.28■■□□□ 1.64
RAD23A-206ENST00000590881 TOP2AP11388 1531 aaKnown RBP25.07■■□□□ 1.6
RAD23A-206ENST00000590881 NESP48681 1621 aa24.79■■□□□ 1.56
RAD23A-206ENST00000590881 SUPT5HO00267 1087 aaKnown RBP24.77■■□□□ 1.56
RAD23A-206ENST00000590881 LAMC3Q9Y6N6 1575 aa24.76■■□□□ 1.55
RAD23A-206ENST00000590881 CCDC88BA6NC98 1476 aa24.74■■□□□ 1.55
RAD23A-206ENST00000590881 CADPSQ9ULU8 1353 aa24.67■■□□□ 1.54
RAD23A-206ENST00000590881 PRDM2Q13029 1718 aa24.62■■□□□ 1.53
RAD23A-206ENST00000590881 CFTRP13569 1480 aa24.61■■□□□ 1.53
RAD23A-206ENST00000590881 KIF21AQ7Z4S6 1674 aa24.59■■□□□ 1.53
RAD23A-206ENST00000590881 ERCC6Q03468 1493 aa24.53■■□□□ 1.52
RAD23A-206ENST00000590881 PDS5BQ9NTI5 1447 aa24.51■■□□□ 1.51
RAD23A-206ENST00000590881 THOC2Q8NI27 1593 aaKnown RBP24.42■■□□□ 1.5
RAD23A-206ENST00000590881 FANCD2Q9BXW9 1451 aa24.42■■□□□ 1.5
RAD23A-206ENST00000590881 CEP164Q9UPV0 1460 aa24.37■■□□□ 1.49
RAD23A-206ENST00000590881 MRC2Q9UBG0 1479 aa24.28■■□□□ 1.48
RAD23A-206ENST00000590881 WDR62O43379 1518 aa24.25■■□□□ 1.47
RAD23A-206ENST00000590881 CUX2O14529 1486 aa24.23■■□□□ 1.47
RAD23A-206ENST00000590881 URB2Q14146 1524 aaKnown RBP24.2■■□□□ 1.46
RAD23A-206ENST00000590881 DNMBPQ6XZF7 1577 aa24.08■■□□□ 1.45
RAD23A-206ENST00000590881 TOPBP1Q92547 1522 aa24.08■■□□□ 1.45
RAD23A-206ENST00000590881 ABCC8Q09428 1581 aa24.04■■□□□ 1.44
RAD23A-206ENST00000590881 CUX1P39880 1505 aa24■■□□□ 1.43
RAD23A-206ENST00000590881 BIVM-ERCC5R4GMW8 1640 aa23.9■■□□□ 1.42
RAD23A-206ENST00000590881 POLA1P09884 1462 aaPredicted RBP23.88■■□□□ 1.41
RAD23A-206ENST00000590881 SYNJ1O43426 1573 aa23.88■■□□□ 1.41
RAD23A-206ENST00000590881 WRNQ14191 1432 aaPredicted RBP eCLIP23.86■■□□□ 1.41
RAD23A-206ENST00000590881 TOP2BQ02880 1626 aa23.86■■□□□ 1.41
RAD23A-206ENST00000590881 TARBP1Q13395 1621 aaKnown RBP23.86■■□□□ 1.41
RAD23A-206ENST00000590881 FGD5Q6ZNL6 1462 aa23.85■■□□□ 1.41
RAD23A-206ENST00000590881 IFT140Q96RY7 1462 aa23.84■■□□□ 1.41
RAD23A-206ENST00000590881 WDR97A6NE52 1622 aa23.77■■□□□ 1.4
RAD23A-206ENST00000590881 RAD54L2Q9Y4B4 1467 aa23.76■■□□□ 1.39
RAD23A-206ENST00000590881 ZNF608Q9ULD9 1512 aaPredicted RBP23.74■■□□□ 1.39
RAD23A-206ENST00000590881 SOGA1O94964 1423 aa23.74■■□□□ 1.39
RAD23A-206ENST00000590881 EIF4G3O43432 1585 aaKnown RBP23.71■■□□□ 1.39
RAD23A-206ENST00000590881 ABCA10Q8WWZ4 1543 aa23.64■■□□□ 1.37
RAD23A-206ENST00000590881 AQRO60306 1485 aaKnown RBP eCLIP23.6■■□□□ 1.376e-8■■■■■ 42.8
RAD23A-206ENST00000590881 ABCA5Q8WWZ7 1642 aa23.59■■□□□ 1.37
RAD23A-206ENST00000590881 TDRD9Q8NDG6 1382 aaKnown RBP23.57■■□□□ 1.36
RAD23A-206ENST00000590881 PBRM1Q86U86 1689 aa23.56■■□□□ 1.36
RAD23A-206ENST00000590881 GAPVD1Q14C86 1478 aa23.49■■□□□ 1.35
RAD23A-206ENST00000590881 GRIN2BQ13224 1484 aa23.45■■□□□ 1.34
RAD23A-206ENST00000590881 CHD1O14646 1710 aa23.43■■□□□ 1.34
RAD23A-206ENST00000590881 SNAPC4Q5SXM2 1469 aa23.41■■□□□ 1.34
RAD23A-206ENST00000590881 MAGI1Q96QZ7 1491 aaPredicted RBP23.38■■□□□ 1.33
RAD23A-206ENST00000590881 TRIM41Q8WV44 630 aa23.37■■□□□ 1.33
RAD23A-206ENST00000590881 ERICH3Q5RHP9 1530 aa23.36■■□□□ 1.33
RAD23A-206ENST00000590881 ADAMTS12P58397 1594 aa23.33■■□□□ 1.33
RAD23A-206ENST00000590881 KIF27Q86VH2 1401 aa23.33■■□□□ 1.32
RAD23A-206ENST00000590881 SYNJ2O15056 1496 aa23.29■■□□□ 1.32
RAD23A-206ENST00000590881 CHIC1Q5VXU3 224 aa23.27■■□□□ 1.32
RAD23A-206ENST00000590881 RUSC2Q8N2Y8 1516 aa23.26■■□□□ 1.31
RAD23A-206ENST00000590881 CUL7Q14999 1698 aa23.23■■□□□ 1.31
RAD23A-206ENST00000590881 IGF1RP08069 1367 aa23.22■■□□□ 1.31
RAD23A-206ENST00000590881 FHAD1B1AJZ9 1412 aa23.22■■□□□ 1.31
RAD23A-206ENST00000590881 FBLN2P98095 1184 aa23.19■■□□□ 1.3
RAD23A-206ENST00000590881 OSCARQ8IYS5 282 aa23.18■■□□□ 1.3
RAD23A-206ENST00000590881 DNAJC5Q9H3Z4 198 aa23.18■■□□□ 1.3
RAD23A-206ENST00000590881 GRIN2AQ12879 1464 aa23.17■■□□□ 1.3
RAD23A-206ENST00000590881 CHMP7Q8WUX9 453 aaPredicted RBP23.17■■□□□ 1.3
RAD23A-206ENST00000590881 CLASP1Q7Z460 1538 aa23.12■■□□□ 1.29
RAD23A-206ENST00000590881 CEP170Q5SW79 1584 aa23.1■■□□□ 1.29
RAD23A-206ENST00000590881 CARMIL1Q5VZK9 1371 aa23.06■■□□□ 1.28
RAD23A-206ENST00000590881 NUP160Q12769 1436 aa23.06■■□□□ 1.28
RAD23A-206ENST00000590881 EEA1Q15075 1411 aa23.02■■□□□ 1.28
RAD23A-206ENST00000590881 AEBP2Q6ZN18 517 aaPredicted RBP22.98■■□□□ 1.27
RAD23A-206ENST00000590881 PRXQ9BXM0 1461 aa22.98■■□□□ 1.27
RAD23A-206ENST00000590881 RAPGEF2Q9Y4G8 1499 aa22.98■■□□□ 1.27
RAD23A-206ENST00000590881 RIMBP3CA6NJZ7 1639 aa22.94■■□□□ 1.26
RAD23A-206ENST00000590881 RIMBP3BA6NNM3 1639 aa22.94■■□□□ 1.26
RAD23A-206ENST00000590881 SHROOM2Q13796 1616 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms