RNA–Protein interactions for RNA: ENST00000590842.5

TPGS2-215, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

TSL 2 BASIC

Gene TPGS2, Length 1,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-215ENST00000590842 NISCHQ9Y2I1 1504 aa39.39■■■■□ 3.9
TPGS2-215ENST00000590842 CCDC180Q9P1Z9 1646 aa35.21■■■■□ 3.23
TPGS2-215ENST00000590842 ABCC9O60706 1549 aa34.94■■■■□ 3.18
TPGS2-215ENST00000590842 RB1CC1Q8TDY2 1594 aa33.39■■■□□ 2.94
TPGS2-215ENST00000590842 NACADO15069 1562 aa33.24■■■□□ 2.91
TPGS2-215ENST00000590842 DCAF8L2P0C7V8 631 aa33.12■■■□□ 2.89
TPGS2-215ENST00000590842 MYO15BQ96JP2 1530 aa32.9■■■□□ 2.86
TPGS2-215ENST00000590842 ZCCHC6Q5VYS8 1495 aaKnown RBP32.69■■■□□ 2.82
TPGS2-215ENST00000590842 UNC13AQ9UPW8 1703 aa32.6■■■□□ 2.81
TPGS2-215ENST00000590842 PABPN1Q86U42 306 aaKnown RBP eCLIP32.59■■■□□ 2.81
TPGS2-215ENST00000590842 DCAF1Q9Y4B6 1507 aa32.56■■■□□ 2.8
TPGS2-215ENST00000590842 DNAJC5BQ9UF47 199 aa32.55■■■□□ 2.8
TPGS2-215ENST00000590842 BICRAQ9NZM4 1560 aa32.41■■■□□ 2.78
TPGS2-215ENST00000590842 SCRIBQ14160 1630 aa32.08■■■□□ 2.73
TPGS2-215ENST00000590842 SHROOM4Q9ULL8 1493 aa32.03■■■□□ 2.72
TPGS2-215ENST00000590842 EIF4G1Q04637 1599 aaKnown RBP31.59■■■□□ 2.65
TPGS2-215ENST00000590842 CC2D2AQ9P2K1 1620 aa31.58■■■□□ 2.65
TPGS2-215ENST00000590842 CECR2Q9BXF3 1484 aa31.46■■■□□ 2.63
TPGS2-215ENST00000590842 NCAPD3P42695 1498 aa30.7■■■□□ 2.5
TPGS2-215ENST00000590842 SMARCA4P51532 1647 aa30.65■■■□□ 2.5
TPGS2-215ENST00000590842 ATAD2BQ9ULI0 1458 aa30.63■■■□□ 2.49
TPGS2-215ENST00000590842 SMARCA2P51531 1590 aa30.56■■■□□ 2.48
TPGS2-215ENST00000590842 BAZ1AQ9NRL2 1556 aaPredicted RBP30.55■■■□□ 2.48
TPGS2-215ENST00000590842 HMGXB3Q12766 1538 aa30.48■■■□□ 2.47
TPGS2-215ENST00000590842 PEG3Q9GZU2 1588 aa30.37■■■□□ 2.45
TPGS2-215ENST00000590842 MROH2BQ7Z745 1585 aa30.34■■■□□ 2.45
TPGS2-215ENST00000590842 BAZ1BQ9UIG0 1483 aaKnown RBP30.34■■■□□ 2.45
TPGS2-215ENST00000590842 ERCC6Q03468 1493 aa30.16■■■□□ 2.42
TPGS2-215ENST00000590842 NESP48681 1621 aa30.09■■■□□ 2.41
TPGS2-215ENST00000590842 CUX2O14529 1486 aa30.03■■■□□ 2.4
TPGS2-215ENST00000590842 WIZO95785 1651 aa29.98■■■□□ 2.39
TPGS2-215ENST00000590842 LAMC3Q9Y6N6 1575 aa29.94■■■□□ 2.38
TPGS2-215ENST00000590842 RSF1Q96T23 1441 aaPredicted RBP29.83■■■□□ 2.37
TPGS2-215ENST00000590842 PDS5BQ9NTI5 1447 aa29.78■■■□□ 2.36
TPGS2-215ENST00000590842 CADPSQ9ULU8 1353 aa29.77■■■□□ 2.36
TPGS2-215ENST00000590842 THOC2Q8NI27 1593 aaKnown RBP29.73■■■□□ 2.35
TPGS2-215ENST00000590842 DNAJC5Q9H3Z4 198 aa29.71■■■□□ 2.35
TPGS2-215ENST00000590842 KIF21AQ7Z4S6 1674 aa29.7■■■□□ 2.35
TPGS2-215ENST00000590842 TOP2AP11388 1531 aaKnown RBP29.63■■■□□ 2.33
TPGS2-215ENST00000590842 CFTRP13569 1480 aa29.49■■■□□ 2.31
TPGS2-215ENST00000590842 MRC2Q9UBG0 1479 aa29.49■■■□□ 2.31
TPGS2-215ENST00000590842 CEP164Q9UPV0 1460 aa29.42■■■□□ 2.3
TPGS2-215ENST00000590842 FANCD2Q9BXW9 1451 aa29.42■■■□□ 2.3
TPGS2-215ENST00000590842 WDR62O43379 1518 aa29.4■■■□□ 2.3
TPGS2-215ENST00000590842 CCDC88BA6NC98 1476 aa29.3■■■□□ 2.28
TPGS2-215ENST00000590842 PRDM2Q13029 1718 aa29.17■■■□□ 2.26
TPGS2-215ENST00000590842 URB2Q14146 1524 aaKnown RBP29.15■■■□□ 2.26
TPGS2-215ENST00000590842 TOPBP1Q92547 1522 aa28.89■■■□□ 2.22
TPGS2-215ENST00000590842 ABCC8Q09428 1581 aa28.88■■■□□ 2.21
TPGS2-215ENST00000590842 IFT140Q96RY7 1462 aa28.84■■■□□ 2.21
TPGS2-215ENST00000590842 DNMBPQ6XZF7 1577 aa28.81■■■□□ 2.2
TPGS2-215ENST00000590842 ZNF608Q9ULD9 1512 aaPredicted RBP28.74■■■□□ 2.19
TPGS2-215ENST00000590842 OSCARQ8IYS5 282 aa28.72■■■□□ 2.19
TPGS2-215ENST00000590842 SUPT5HO00267 1087 aaKnown RBP28.69■■■□□ 2.18
TPGS2-215ENST00000590842 POLA1P09884 1462 aaPredicted RBP28.61■■■□□ 2.17
TPGS2-215ENST00000590842 TARBP1Q13395 1621 aaKnown RBP28.61■■■□□ 2.17
TPGS2-215ENST00000590842 EIF4G3O43432 1585 aaKnown RBP28.59■■■□□ 2.17
TPGS2-215ENST00000590842 AQRO60306 1485 aaKnown RBP eCLIP28.53■■■□□ 2.161e-6■■□□□ 12.5
TPGS2-215ENST00000590842 RAD54L2Q9Y4B4 1467 aa28.5■■■□□ 2.15
TPGS2-215ENST00000590842 SOGA1O94964 1423 aa28.5■■■□□ 2.15
TPGS2-215ENST00000590842 TRIM41Q8WV44 630 aa28.49■■■□□ 2.15
TPGS2-215ENST00000590842 CUX1P39880 1505 aa28.48■■■□□ 2.15
TPGS2-215ENST00000590842 FGD5Q6ZNL6 1462 aa28.47■■■□□ 2.15
TPGS2-215ENST00000590842 TDRD9Q8NDG6 1382 aaKnown RBP28.41■■■□□ 2.14
TPGS2-215ENST00000590842 WDR97A6NE52 1622 aa28.36■■■□□ 2.13
TPGS2-215ENST00000590842 CHD1O14646 1710 aa28.32■■■□□ 2.12
TPGS2-215ENST00000590842 FBLN2P98095 1184 aa28.29■■■□□ 2.12
TPGS2-215ENST00000590842 RIMBP3CA6NJZ7 1639 aa28.27■■■□□ 2.12
TPGS2-215ENST00000590842 RIMBP3BA6NNM3 1639 aa28.27■■■□□ 2.12
TPGS2-215ENST00000590842 RIMBP3Q9UFD9 1639 aa28.27■■■□□ 2.12
TPGS2-215ENST00000590842 SNAPC4Q5SXM2 1469 aa28.24■■■□□ 2.11
TPGS2-215ENST00000590842 ARHGEF11O15085 1522 aa28.23■■■□□ 2.11
TPGS2-215ENST00000590842 GRIN2BQ13224 1484 aa28.22■■■□□ 2.11
TPGS2-215ENST00000590842 MAGI1Q96QZ7 1491 aaPredicted RBP28.2■■■□□ 2.1
TPGS2-215ENST00000590842 ABCA10Q8WWZ4 1543 aa28.18■■■□□ 2.1
TPGS2-215ENST00000590842 GAPVD1Q14C86 1478 aa28.15■■■□□ 2.1
TPGS2-215ENST00000590842 CHMP7Q8WUX9 453 aaPredicted RBP28.14■■■□□ 2.1
TPGS2-215ENST00000590842 WRNQ14191 1432 aaPredicted RBP eCLIP28.13■■■□□ 2.09
TPGS2-215ENST00000590842 TOP2BQ02880 1626 aa28.11■■■□□ 2.09
TPGS2-215ENST00000590842 BIVM-ERCC5R4GMW8 1640 aa28.1■■■□□ 2.09
TPGS2-215ENST00000590842 SYNJ2O15056 1496 aa28.1■■■□□ 2.09
TPGS2-215ENST00000590842 PBRM1Q86U86 1689 aa28.1■■■□□ 2.09
TPGS2-215ENST00000590842 ABCA5Q8WWZ7 1642 aa28.09■■■□□ 2.09
TPGS2-215ENST00000590842 SYNJ1O43426 1573 aa28.07■■■□□ 2.08
TPGS2-215ENST00000590842 CLASP1Q7Z460 1538 aa28.02■■■□□ 2.08
TPGS2-215ENST00000590842 CYB5RLQ6IPT4 315 aa28.01■■■□□ 2.07
TPGS2-215ENST00000590842 ARAP1Q96P48 1450 aa27.96■■■□□ 2.07
TPGS2-215ENST00000590842 GRIN2AQ12879 1464 aa27.86■■■□□ 2.05
TPGS2-215ENST00000590842 ADAMTS12P58397 1594 aa27.86■■■□□ 2.05
TPGS2-215ENST00000590842 ERICH3Q5RHP9 1530 aa27.83■■■□□ 2.05
TPGS2-215ENST00000590842 FHAD1B1AJZ9 1412 aa27.82■■■□□ 2.04
TPGS2-215ENST00000590842 NUP160Q12769 1436 aa27.75■■■□□ 2.03
TPGS2-215ENST00000590842 CEP170Q5SW79 1584 aa27.73■■■□□ 2.03
TPGS2-215ENST00000590842 TRHP20396 242 aaPredicted RBP27.61■■■□□ 2.01
TPGS2-215ENST00000590842 ERCC6L2Q5T890 1561 aa27.6■■■□□ 2.01
TPGS2-215ENST00000590842 SHROOM2Q13796 1616 aa27.59■■■□□ 2.01
TPGS2-215ENST00000590842 KIF27Q86VH2 1401 aa27.58■■■□□ 2.01
TPGS2-215ENST00000590842 IGF1RP08069 1367 aa27.55■■■□□ 2
TPGS2-215ENST00000590842 JPH4Q96JJ6 628 aa27.48■■□□□ 1.99
TPGS2-215ENST00000590842 PRG4Q92954 1404 aaPredicted RBP27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms