RNA–Protein interactions for RNA: ENST00000590746.5

RTN2-209, Transcript of reticulon 2, humanhuman

TSL 3

Gene RTN2, Length 228 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-209ENST00000590746 NISCHQ9Y2I1 1504 aa22.93■■□□□ 1.26
RTN2-209ENST00000590746 CCDC180Q9P1Z9 1646 aa20.24■□□□□ 0.83
RTN2-209ENST00000590746 ABCC9O60706 1549 aa19.92■□□□□ 0.78
RTN2-209ENST00000590746 DCAF8L2P0C7V8 631 aa19.35■□□□□ 0.69
RTN2-209ENST00000590746 RB1CC1Q8TDY2 1594 aa19.1■□□□□ 0.65
RTN2-209ENST00000590746 NACADO15069 1562 aa19.09■□□□□ 0.65
RTN2-209ENST00000590746 ZCCHC6Q5VYS8 1495 aaKnown RBP19.09■□□□□ 0.65
RTN2-209ENST00000590746 MYO15BQ96JP2 1530 aa18.96■□□□□ 0.63
RTN2-209ENST00000590746 DCAF1Q9Y4B6 1507 aa18.91■□□□□ 0.62
RTN2-209ENST00000590746 PABPN1Q86U42 306 aaKnown RBP eCLIP18.72■□□□□ 0.59
RTN2-209ENST00000590746 UNC13AQ9UPW8 1703 aa18.6■□□□□ 0.57
RTN2-209ENST00000590746 SCRIBQ14160 1630 aa18.59■□□□□ 0.57
RTN2-209ENST00000590746 BICRAQ9NZM4 1560 aa18.52■□□□□ 0.56
RTN2-209ENST00000590746 DNAJC5BQ9UF47 199 aa18.31■□□□□ 0.52
RTN2-209ENST00000590746 SHROOM4Q9ULL8 1493 aa18.29■□□□□ 0.52
RTN2-209ENST00000590746 EIF4G1Q04637 1599 aaKnown RBP18.04■□□□□ 0.48
RTN2-209ENST00000590746 CC2D2AQ9P2K1 1620 aa17.96■□□□□ 0.47
RTN2-209ENST00000590746 CECR2Q9BXF3 1484 aa17.91■□□□□ 0.46
RTN2-209ENST00000590746 SMARCA4P51532 1647 aa17.75■□□□□ 0.43
RTN2-209ENST00000590746 BAZ1AQ9NRL2 1556 aaPredicted RBP17.74■□□□□ 0.43
RTN2-209ENST00000590746 MROH2BQ7Z745 1585 aa17.7■□□□□ 0.42
RTN2-209ENST00000590746 ATAD2BQ9ULI0 1458 aa17.69■□□□□ 0.42
RTN2-209ENST00000590746 NCAPD3P42695 1498 aa17.66■□□□□ 0.42
RTN2-209ENST00000590746 SMARCA2P51531 1590 aa17.63■□□□□ 0.41
RTN2-209ENST00000590746 BAZ1BQ9UIG0 1483 aaKnown RBP17.54■□□□□ 0.4
RTN2-209ENST00000590746 RSF1Q96T23 1441 aaPredicted RBP17.54■□□□□ 0.4
RTN2-209ENST00000590746 PEG3Q9GZU2 1588 aa17.53■□□□□ 0.4
RTN2-209ENST00000590746 HMGXB3Q12766 1538 aa17.52■□□□□ 0.39
RTN2-209ENST00000590746 WIZO95785 1651 aa17.48■□□□□ 0.39
RTN2-209ENST00000590746 SUPT5HO00267 1087 aaKnown RBP17.28■□□□□ 0.36
RTN2-209ENST00000590746 TOP2AP11388 1531 aaKnown RBP17.27■□□□□ 0.36
RTN2-209ENST00000590746 NESP48681 1621 aa17.25■□□□□ 0.35
RTN2-209ENST00000590746 CADPSQ9ULU8 1353 aa17.19■□□□□ 0.34
RTN2-209ENST00000590746 ERCC6Q03468 1493 aa17.17■□□□□ 0.34
RTN2-209ENST00000590746 CCDC88BA6NC98 1476 aa17.15■□□□□ 0.34
RTN2-209ENST00000590746 LAMC3Q9Y6N6 1575 aa17.13■□□□□ 0.33
RTN2-209ENST00000590746 PDS5BQ9NTI5 1447 aa17.1■□□□□ 0.33
RTN2-209ENST00000590746 CFTRP13569 1480 aa17.06■□□□□ 0.32
RTN2-209ENST00000590746 FANCD2Q9BXW9 1451 aa16.97■□□□□ 0.31
RTN2-209ENST00000590746 KIF21AQ7Z4S6 1674 aa16.95■□□□□ 0.3
RTN2-209ENST00000590746 CEP164Q9UPV0 1460 aa16.92■□□□□ 0.3
RTN2-209ENST00000590746 CUX2O14529 1486 aa16.89■□□□□ 0.29
RTN2-209ENST00000590746 MRC2Q9UBG0 1479 aa16.88■□□□□ 0.29
RTN2-209ENST00000590746 THOC2Q8NI27 1593 aaKnown RBP16.87■□□□□ 0.29
RTN2-209ENST00000590746 WDR62O43379 1518 aa16.79■□□□□ 0.28
RTN2-209ENST00000590746 PRDM2Q13029 1718 aa16.79■□□□□ 0.28
RTN2-209ENST00000590746 URB2Q14146 1524 aaKnown RBP16.78■□□□□ 0.28
RTN2-209ENST00000590746 TOPBP1Q92547 1522 aa16.69■□□□□ 0.26
RTN2-209ENST00000590746 ABCC8Q09428 1581 aa16.67■□□□□ 0.26
RTN2-209ENST00000590746 DNMBPQ6XZF7 1577 aa16.64■□□□□ 0.25
RTN2-209ENST00000590746 CUX1P39880 1505 aa16.59■□□□□ 0.25
RTN2-209ENST00000590746 IFT140Q96RY7 1462 aa16.57■□□□□ 0.24
RTN2-209ENST00000590746 POLA1P09884 1462 aaPredicted RBP16.55■□□□□ 0.24
RTN2-209ENST00000590746 SOGA1O94964 1423 aa16.54■□□□□ 0.24
RTN2-209ENST00000590746 WRNQ14191 1432 aaPredicted RBP eCLIP16.53■□□□□ 0.24
RTN2-209ENST00000590746 CHIC1Q5VXU3 224 aa16.53■□□□□ 0.24
RTN2-209ENST00000590746 FGD5Q6ZNL6 1462 aa16.53■□□□□ 0.24
RTN2-209ENST00000590746 RAD54L2Q9Y4B4 1467 aa16.53■□□□□ 0.24
RTN2-209ENST00000590746 ZNF608Q9ULD9 1512 aaPredicted RBP16.52■□□□□ 0.24
RTN2-209ENST00000590746 TDRD9Q8NDG6 1382 aaKnown RBP16.47■□□□□ 0.23
RTN2-209ENST00000590746 AQRO60306 1485 aaKnown RBP eCLIP16.47■□□□□ 0.23
RTN2-209ENST00000590746 TARBP1Q13395 1621 aaKnown RBP16.46■□□□□ 0.23
RTN2-209ENST00000590746 SYNJ1O43426 1573 aa16.44■□□□□ 0.22
RTN2-209ENST00000590746 TOP2BQ02880 1626 aa16.42■□□□□ 0.22
RTN2-209ENST00000590746 DNAJC5Q9H3Z4 198 aa16.41■□□□□ 0.22
RTN2-209ENST00000590746 BIVM-ERCC5R4GMW8 1640 aa16.38■□□□□ 0.21
RTN2-209ENST00000590746 EIF4G3O43432 1585 aaKnown RBP16.38■□□□□ 0.21
RTN2-209ENST00000590746 ABCA10Q8WWZ4 1543 aa16.35■□□□□ 0.21
RTN2-209ENST00000590746 FBLN2P98095 1184 aa16.34■□□□□ 0.21
RTN2-209ENST00000590746 OSCARQ8IYS5 282 aa16.33■□□□□ 0.2
RTN2-209ENST00000590746 GAPVD1Q14C86 1478 aa16.32■□□□□ 0.2
RTN2-209ENST00000590746 AEBP2Q6ZN18 517 aaPredicted RBP16.31■□□□□ 0.2
RTN2-209ENST00000590746 GRIN2BQ13224 1484 aa16.29■□□□□ 0.2
RTN2-209ENST00000590746 TRIM41Q8WV44 630 aa16.29■□□□□ 0.2
RTN2-209ENST00000590746 WDR97A6NE52 1622 aa16.27■□□□□ 0.2
RTN2-209ENST00000590746 CHMP7Q8WUX9 453 aaPredicted RBP16.27■□□□□ 0.2
RTN2-209ENST00000590746 SNAPC4Q5SXM2 1469 aa16.27■□□□□ 0.19
RTN2-209ENST00000590746 ABCA5Q8WWZ7 1642 aa16.23■□□□□ 0.19
RTN2-209ENST00000590746 MAGI1Q96QZ7 1491 aaPredicted RBP16.22■□□□□ 0.19
RTN2-209ENST00000590746 KIF27Q86VH2 1401 aa16.19■□□□□ 0.18
RTN2-209ENST00000590746 PBRM1Q86U86 1689 aa16.18■□□□□ 0.18
RTN2-209ENST00000590746 SYNJ2O15056 1496 aa16.16■□□□□ 0.18
RTN2-209ENST00000590746 IGF1RP08069 1367 aa16.15■□□□□ 0.18
RTN2-209ENST00000590746 CHD1O14646 1710 aa16.14■□□□□ 0.17
RTN2-209ENST00000590746 ERICH3Q5RHP9 1530 aa16.14■□□□□ 0.17
RTN2-209ENST00000590746 FHAD1B1AJZ9 1412 aa16.12■□□□□ 0.17
RTN2-209ENST00000590746 RUSC2Q8N2Y8 1516 aa16.09■□□□□ 0.17
RTN2-209ENST00000590746 ADAMTS12P58397 1594 aa16.09■□□□□ 0.17
RTN2-209ENST00000590746 GRIN2AQ12879 1464 aa16.07■□□□□ 0.16
RTN2-209ENST00000590746 CARMIL1Q5VZK9 1371 aa16.05■□□□□ 0.16
RTN2-209ENST00000590746 FAM9AQ8IZU1 332 aaPredicted RBP16■□□□□ 0.15
RTN2-209ENST00000590746 NUP160Q12769 1436 aa16■□□□□ 0.15
RTN2-209ENST00000590746 CLASP1Q7Z460 1538 aa15.99■□□□□ 0.15
RTN2-209ENST00000590746 CEP170Q5SW79 1584 aa15.97■□□□□ 0.15
RTN2-209ENST00000590746 ARHGEF11O15085 1522 aa15.97■□□□□ 0.15
RTN2-209ENST00000590746 CUL7Q14999 1698 aa15.96■□□□□ 0.15
RTN2-209ENST00000590746 CSRNP3Q8WYN3 585 aa15.96■□□□□ 0.15
RTN2-209ENST00000590746 CYB5RLQ6IPT4 315 aa15.95■□□□□ 0.14
RTN2-209ENST00000590746 JPH4Q96JJ6 628 aa15.94■□□□□ 0.14
RTN2-209ENST00000590746 RIMBP3CA6NJZ7 1639 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms