RNA–Protein interactions for RNA: ENST00000590684.5

TCF3-215, Transcript of transcription factor 3, humanhuman

TSL 3

Gene TCF3, Length 1,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-215ENST00000590684 SF3B1O75533 1304 aaKnown RBP eCLIP17.78■□□□□ 0.442e-7■■■■■ 67.4
TCF3-215ENST00000590684 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.62■□□□□ 0.416e-18■■■■■ 61.4
TCF3-215ENST00000590684 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.2■□□□□ 0.344e-6■■■■■ 54.5
TCF3-215ENST00000590684 METAP2P50579 478 aaKnown RBP eCLIP18.54■□□□□ 0.566e-11■■■■■ 41.8
TCF3-215ENST00000590684 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.27■□□□□ 0.22e-6■■■■■ 36.7
TCF3-215ENST00000590684 PCBP2Q15366 365 aaKnown RBP eCLIP15.05■□□□□ -01e-6■■■■■ 32
TCF3-215ENST00000590684 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.21■□□□□ 0.032e-8■■■■■ 30.1
TCF3-215ENST00000590684 EFTUD2Q15029 972 aaKnown RBP eCLIP15.19■□□□□ 0.021e-6■■■■■ 29.5
TCF3-215ENST00000590684 XRCC6P12956 609 aaKnown RBP eCLIP17.98■□□□□ 0.476e-6■■■■■ 27.6
TCF3-215ENST00000590684 TIA1P31483 386 aaKnown RBP eCLIP14.82□□□□□ -0.049e-10■■■■■ 27.6
TCF3-215ENST00000590684 PCBP1Q15365 356 aaKnown RBP eCLIP17.98■□□□□ 0.471e-7■■■■□ 23.7
TCF3-215ENST00000590684 GTF2F1P35269 517 aaKnown RBP eCLIP18.12■□□□□ 0.494e-7■■■■□ 23.1
TCF3-215ENST00000590684 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.56■□□□□ 0.723e-8■■■■□ 22.9
TCF3-215ENST00000590684 PRPF4O43172 522 aaKnown RBP eCLIP15.36■□□□□ 0.058e-7■■■■□ 22
TCF3-215ENST00000590684 HNRNPLP14866 589 aaKnown RBP eCLIP17.01■□□□□ 0.317e-8■■■■□ 21.9
TCF3-215ENST00000590684 SF3B4Q15427 424 aaKnown RBP eCLIP14.69□□□□□ -0.061e-6■■■■□ 20.1
TCF3-215ENST00000590684 HNRNPKP61978 463 aaKnown RBP eCLIP16.34■□□□□ 0.213e-6■■■■□ 19.4
TCF3-215ENST00000590684 AQRO60306 1485 aaKnown RBP eCLIP29.1■■■□□ 2.257e-7■■■□□ 18.9
TCF3-215ENST00000590684 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.02■□□□□ 0.84e-7■■■□□ 18.8
TCF3-215ENST00000590684 FXR2P51116 673 aaKnown RBP eCLIP17.96■□□□□ 0.461e-7■■■□□ 18.6
TCF3-215ENST00000590684 QKIQ96PU8 341 aaKnown RBP eCLIP16.01■□□□□ 0.154e-12■■■□□ 18.3
TCF3-215ENST00000590684 AGGF1Q8N302 714 aaeCLIP15.56■□□□□ 0.081e-6■■■□□ 16.6
TCF3-215ENST00000590684 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.76■□□□□ 0.756e-6■■■□□ 15.9
TCF3-215ENST00000590684 SF3A3Q12874 501 aaKnown RBP eCLIP14.06□□□□□ -0.161e-6■■■□□ 15.6
TCF3-215ENST00000590684 RBM15Q96T37 977 aaKnown RBP eCLIP16.21■□□□□ 0.191e-6■■□□□ 14.1
TCF3-215ENST00000590684 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.82□□□□□ -0.27e-9■■□□□ 14
TCF3-215ENST00000590684 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.53□□□□□ -0.084e-9■■□□□ 13.9
TCF3-215ENST00000590684 ZC3H11AO75152 810 aaKnown RBP eCLIP17.99■□□□□ 0.477e-6■■□□□ 13.7
TCF3-215ENST00000590684 FMR1Q06787 632 aaKnown RBP eCLIP20.64■□□□□ 0.897e-6■■□□□ 12.8
TCF3-215ENST00000590684 DDX6P26196 483 aaKnown RBP eCLIP17.29■□□□□ 0.361e-6■■□□□ 12.6
TCF3-215ENST00000590684 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.78□□□□□ -0.041e-29■□□□□ 11.2
TCF3-215ENST00000590684 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.91■□□□□ 0.141e-6■□□□□ 11
TCF3-215ENST00000590684 PUM1Q14671 1186 aaKnown RBP eCLIP17.02■□□□□ 0.322e-6■□□□□ 10.8
TCF3-215ENST00000590684 PPIGQ13427 754 aaKnown RBP eCLIP18.76■□□□□ 0.597e-7■□□□□ 10.5
TCF3-215ENST00000590684 PABPC4Q13310 644 aaKnown RBP eCLIP19.58■□□□□ 0.738e-7■□□□□ 10.3
TCF3-215ENST00000590684 ILF3Q12906 894 aaKnown RBP eCLIP16.11■□□□□ 0.174e-11■□□□□ 9.9
TCF3-215ENST00000590684 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.77■□□□□ 0.63e-6■□□□□ 9.5
TCF3-215ENST00000590684 YBX3P16989 372 aaKnown RBP eCLIP21.73■■□□□ 1.071e-10■□□□□ 9.4
TCF3-215ENST00000590684 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.39■□□□□ 0.697e-6■□□□□ 9.4
TCF3-215ENST00000590684 PABPN1Q86U42 306 aaKnown RBP eCLIP33.19■■■□□ 2.93e-7■□□□□ 8.9
TCF3-215ENST00000590684 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.04■■□□□ 1.64e-6■□□□□ 8.2
Retrieved 41 of 41 RNA–protein pairs in 10 ms