RNA–Protein interactions for RNA: ENST00000590448.5

ATP5A1-214, Transcript of ATP synthase subunit alpha, mitochondrial, humanhuman

TSL 2

Gene ATP5A1, Length 604 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP5A1-214ENST00000590448 NISCHQ9Y2I1 1504 aa31.64■■■□□ 2.66
ATP5A1-214ENST00000590448 ABCC9O60706 1549 aa28.33■■■□□ 2.13
ATP5A1-214ENST00000590448 CCDC180Q9P1Z9 1646 aa28.25■■■□□ 2.11
ATP5A1-214ENST00000590448 RB1CC1Q8TDY2 1594 aa26.87■■□□□ 1.89
ATP5A1-214ENST00000590448 DCAF8L2P0C7V8 631 aa26.75■■□□□ 1.87
ATP5A1-214ENST00000590448 NACADO15069 1562 aa26.7■■□□□ 1.86
ATP5A1-214ENST00000590448 DNAJC5BQ9UF47 199 aa26.54■■□□□ 1.84
ATP5A1-214ENST00000590448 PABPN1Q86U42 306 aaKnown RBP eCLIP26.43■■□□□ 1.82
ATP5A1-214ENST00000590448 MYO15BQ96JP2 1530 aa26.32■■□□□ 1.8
ATP5A1-214ENST00000590448 UNC13AQ9UPW8 1703 aa26.3■■□□□ 1.8
ATP5A1-214ENST00000590448 ZCCHC6Q5VYS8 1495 aaKnown RBP26.24■■□□□ 1.79
ATP5A1-214ENST00000590448 BICRAQ9NZM4 1560 aa26.18■■□□□ 1.78
ATP5A1-214ENST00000590448 DCAF1Q9Y4B6 1507 aa26.04■■□□□ 1.76
ATP5A1-214ENST00000590448 SCRIBQ14160 1630 aa25.89■■□□□ 1.74
ATP5A1-214ENST00000590448 SHROOM4Q9ULL8 1493 aa25.66■■□□□ 1.7
ATP5A1-214ENST00000590448 CC2D2AQ9P2K1 1620 aa25.53■■□□□ 1.68
ATP5A1-214ENST00000590448 EIF4G1Q04637 1599 aaKnown RBP25.49■■□□□ 1.67
ATP5A1-214ENST00000590448 CECR2Q9BXF3 1484 aa25.45■■□□□ 1.66
ATP5A1-214ENST00000590448 NCAPD3P42695 1498 aa24.69■■□□□ 1.54
ATP5A1-214ENST00000590448 ATAD2BQ9ULI0 1458 aa24.67■■□□□ 1.54
ATP5A1-214ENST00000590448 SMARCA4P51532 1647 aa24.65■■□□□ 1.54
ATP5A1-214ENST00000590448 SMARCA2P51531 1590 aa24.53■■□□□ 1.52
ATP5A1-214ENST00000590448 BAZ1AQ9NRL2 1556 aaPredicted RBP24.5■■□□□ 1.51
ATP5A1-214ENST00000590448 HMGXB3Q12766 1538 aa24.48■■□□□ 1.51
ATP5A1-214ENST00000590448 MROH2BQ7Z745 1585 aa24.44■■□□□ 1.5
ATP5A1-214ENST00000590448 BAZ1BQ9UIG0 1483 aaKnown RBP24.41■■□□□ 1.5
ATP5A1-214ENST00000590448 NESP48681 1621 aa24.39■■□□□ 1.49
ATP5A1-214ENST00000590448 ERCC6Q03468 1493 aa24.37■■□□□ 1.49
ATP5A1-214ENST00000590448 PEG3Q9GZU2 1588 aa24.36■■□□□ 1.49
ATP5A1-214ENST00000590448 CUX2O14529 1486 aa24.23■■□□□ 1.47
ATP5A1-214ENST00000590448 DNAJC5Q9H3Z4 198 aa24.17■■□□□ 1.46
ATP5A1-214ENST00000590448 WIZO95785 1651 aa24.14■■□□□ 1.45
ATP5A1-214ENST00000590448 LAMC3Q9Y6N6 1575 aa24.07■■□□□ 1.44
ATP5A1-214ENST00000590448 THOC2Q8NI27 1593 aaKnown RBP24.03■■□□□ 1.44
ATP5A1-214ENST00000590448 KIF21AQ7Z4S6 1674 aa23.99■■□□□ 1.43
ATP5A1-214ENST00000590448 RSF1Q96T23 1441 aaPredicted RBP23.96■■□□□ 1.43
ATP5A1-214ENST00000590448 CADPSQ9ULU8 1353 aa23.96■■□□□ 1.43
ATP5A1-214ENST00000590448 PDS5BQ9NTI5 1447 aa23.94■■□□□ 1.42
ATP5A1-214ENST00000590448 TOP2AP11388 1531 aaKnown RBP23.79■■□□□ 1.4
ATP5A1-214ENST00000590448 MRC2Q9UBG0 1479 aa23.78■■□□□ 1.4
ATP5A1-214ENST00000590448 FANCD2Q9BXW9 1451 aa23.71■■□□□ 1.39
ATP5A1-214ENST00000590448 WDR62O43379 1518 aa23.7■■□□□ 1.38
ATP5A1-214ENST00000590448 CFTRP13569 1480 aa23.7■■□□□ 1.38
ATP5A1-214ENST00000590448 CEP164Q9UPV0 1460 aa23.7■■□□□ 1.38
ATP5A1-214ENST00000590448 CCDC88BA6NC98 1476 aa23.56■■□□□ 1.36
ATP5A1-214ENST00000590448 URB2Q14146 1524 aaKnown RBP23.54■■□□□ 1.36
ATP5A1-214ENST00000590448 PRDM2Q13029 1718 aa23.39■■□□□ 1.33
ATP5A1-214ENST00000590448 TOPBP1Q92547 1522 aa23.28■■□□□ 1.32
ATP5A1-214ENST00000590448 ZNF608Q9ULD9 1512 aaPredicted RBP23.27■■□□□ 1.32
ATP5A1-214ENST00000590448 TRIM41Q8WV44 630 aa23.24■■□□□ 1.31
ATP5A1-214ENST00000590448 IFT140Q96RY7 1462 aa23.2■■□□□ 1.3
ATP5A1-214ENST00000590448 OSCARQ8IYS5 282 aa23.18■■□□□ 1.3
ATP5A1-214ENST00000590448 DNMBPQ6XZF7 1577 aa23.16■■□□□ 1.3
ATP5A1-214ENST00000590448 ABCC8Q09428 1581 aa23.11■■□□□ 1.29
ATP5A1-214ENST00000590448 EIF4G3O43432 1585 aaKnown RBP23.08■■□□□ 1.29
ATP5A1-214ENST00000590448 AQRO60306 1485 aaKnown RBP eCLIP23.05■■□□□ 1.285e-6■□□□□ 10.1
ATP5A1-214ENST00000590448 POLA1P09884 1462 aaPredicted RBP23.05■■□□□ 1.28
ATP5A1-214ENST00000590448 TARBP1Q13395 1621 aaKnown RBP23.05■■□□□ 1.28
ATP5A1-214ENST00000590448 SUPT5HO00267 1087 aaKnown RBP23.04■■□□□ 1.28
ATP5A1-214ENST00000590448 RAD54L2Q9Y4B4 1467 aa23.02■■□□□ 1.28
ATP5A1-214ENST00000590448 CUX1P39880 1505 aa22.95■■□□□ 1.26
ATP5A1-214ENST00000590448 TDRD9Q8NDG6 1382 aaKnown RBP22.94■■□□□ 1.26
ATP5A1-214ENST00000590448 FGD5Q6ZNL6 1462 aa22.93■■□□□ 1.26
ATP5A1-214ENST00000590448 SOGA1O94964 1423 aa22.93■■□□□ 1.26
ATP5A1-214ENST00000590448 RIMBP3CA6NJZ7 1639 aa22.91■■□□□ 1.26
ATP5A1-214ENST00000590448 RIMBP3BA6NNM3 1639 aa22.91■■□□□ 1.26
ATP5A1-214ENST00000590448 RIMBP3Q9UFD9 1639 aa22.91■■□□□ 1.26
ATP5A1-214ENST00000590448 FBLN2P98095 1184 aa22.87■■□□□ 1.25
ATP5A1-214ENST00000590448 CHD1O14646 1710 aa22.87■■□□□ 1.25
ATP5A1-214ENST00000590448 ARHGEF11O15085 1522 aa22.85■■□□□ 1.25
ATP5A1-214ENST00000590448 SNAPC4Q5SXM2 1469 aa22.8■■□□□ 1.24
ATP5A1-214ENST00000590448 WDR97A6NE52 1622 aa22.71■■□□□ 1.23
ATP5A1-214ENST00000590448 CYB5RLQ6IPT4 315 aa22.71■■□□□ 1.23
ATP5A1-214ENST00000590448 GRIN2BQ13224 1484 aa22.7■■□□□ 1.22
ATP5A1-214ENST00000590448 CHMP7Q8WUX9 453 aaPredicted RBP22.67■■□□□ 1.22
ATP5A1-214ENST00000590448 ARAP1Q96P48 1450 aa22.66■■□□□ 1.22
ATP5A1-214ENST00000590448 MAGI1Q96QZ7 1491 aaPredicted RBP22.66■■□□□ 1.22
ATP5A1-214ENST00000590448 GAPVD1Q14C86 1478 aa22.65■■□□□ 1.22
ATP5A1-214ENST00000590448 ABCA10Q8WWZ4 1543 aa22.62■■□□□ 1.21
ATP5A1-214ENST00000590448 CLASP1Q7Z460 1538 aa22.62■■□□□ 1.21
ATP5A1-214ENST00000590448 PBRM1Q86U86 1689 aa22.61■■□□□ 1.21
ATP5A1-214ENST00000590448 SYNJ2O15056 1496 aa22.6■■□□□ 1.21
ATP5A1-214ENST00000590448 ABCA5Q8WWZ7 1642 aa22.6■■□□□ 1.21
ATP5A1-214ENST00000590448 SYNJ1O43426 1573 aa22.59■■□□□ 1.21
ATP5A1-214ENST00000590448 WRNQ14191 1432 aaPredicted RBP eCLIP22.57■■□□□ 1.2
ATP5A1-214ENST00000590448 TOP2BQ02880 1626 aa22.53■■□□□ 1.2
ATP5A1-214ENST00000590448 BIVM-ERCC5R4GMW8 1640 aa22.53■■□□□ 1.2
ATP5A1-214ENST00000590448 ADAMTS12P58397 1594 aa22.43■■□□□ 1.18
ATP5A1-214ENST00000590448 GRIN2AQ12879 1464 aa22.43■■□□□ 1.18
ATP5A1-214ENST00000590448 TRHP20396 242 aaPredicted RBP22.4■■□□□ 1.18
ATP5A1-214ENST00000590448 CEP170Q5SW79 1584 aa22.38■■□□□ 1.17
ATP5A1-214ENST00000590448 ERCC6L2Q5T890 1561 aa22.38■■□□□ 1.17
ATP5A1-214ENST00000590448 FHAD1B1AJZ9 1412 aa22.35■■□□□ 1.17
ATP5A1-214ENST00000590448 NUP160Q12769 1436 aa22.34■■□□□ 1.17
ATP5A1-214ENST00000590448 ERICH3Q5RHP9 1530 aa22.31■■□□□ 1.16
ATP5A1-214ENST00000590448 SHROOM2Q13796 1616 aa22.2■■□□□ 1.15
ATP5A1-214ENST00000590448 PRG4Q92954 1404 aaPredicted RBP22.14■■□□□ 1.14
ATP5A1-214ENST00000590448 IGF1RP08069 1367 aa22.13■■□□□ 1.13
ATP5A1-214ENST00000590448 JPH4Q96JJ6 628 aa22.12■■□□□ 1.13
ATP5A1-214ENST00000590448 RUSC2Q8N2Y8 1516 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms