RNA–Protein interactions for RNA: ENST00000590074.5

FAM20A-203, Transcript of FAM20A, golgi associated secretory pathway pseudokinase, humanhuman

TSL 2

Gene FAM20A, Length 1,642 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20A-203ENST00000590074 NISCHQ9Y2I1 1504 aa50.41■■■■■ 5.66
FAM20A-203ENST00000590074 CCDC180Q9P1Z9 1646 aa44.63■■■■■ 4.73
FAM20A-203ENST00000590074 ABCC9O60706 1549 aa43.13■■■■■ 4.5
FAM20A-203ENST00000590074 ZCCHC6Q5VYS8 1495 aaKnown RBP42.12■■■■■ 4.33
FAM20A-203ENST00000590074 DCAF8L2P0C7V8 631 aa41.81■■■■■ 4.28
FAM20A-203ENST00000590074 NACADO15069 1562 aa41.79■■■■■ 4.28
FAM20A-203ENST00000590074 DCAF1Q9Y4B6 1507 aa41.73■■■■■ 4.27
FAM20A-203ENST00000590074 MYO15BQ96JP2 1530 aa41.72■■■■■ 4.27
FAM20A-203ENST00000590074 RB1CC1Q8TDY2 1594 aa41.72■■■■■ 4.27
FAM20A-203ENST00000590074 UNC13AQ9UPW8 1703 aa40.91■■■■■ 4.14
FAM20A-203ENST00000590074 SCRIBQ14160 1630 aa40.77■■■■■ 4.12
FAM20A-203ENST00000590074 BICRAQ9NZM4 1560 aa40.5■■■■■ 4.07
FAM20A-203ENST00000590074 PABPN1Q86U42 306 aaKnown RBP eCLIP40.37■■■■■ 4.05
FAM20A-203ENST00000590074 SHROOM4Q9ULL8 1493 aa40.1■■■■■ 4.01
FAM20A-203ENST00000590074 EIF4G1Q04637 1599 aaKnown RBP39.36■■■■□ 3.89
FAM20A-203ENST00000590074 CECR2Q9BXF3 1484 aa39.23■■■■□ 3.87
FAM20A-203ENST00000590074 DNAJC5BQ9UF47 199 aa39.13■■■■□ 3.85
FAM20A-203ENST00000590074 CC2D2AQ9P2K1 1620 aa39.08■■■■□ 3.85
FAM20A-203ENST00000590074 BAZ1AQ9NRL2 1556 aaPredicted RBP39.04■■■■□ 3.84
FAM20A-203ENST00000590074 SMARCA4P51532 1647 aa39.04■■■■□ 3.84
FAM20A-203ENST00000590074 MROH2BQ7Z745 1585 aa38.88■■■■□ 3.81
FAM20A-203ENST00000590074 ATAD2BQ9ULI0 1458 aa38.66■■■■□ 3.78
FAM20A-203ENST00000590074 PEG3Q9GZU2 1588 aa38.66■■■■□ 3.78
FAM20A-203ENST00000590074 SMARCA2P51531 1590 aa38.64■■■■□ 3.78
FAM20A-203ENST00000590074 RSF1Q96T23 1441 aaPredicted RBP38.59■■■■□ 3.77
FAM20A-203ENST00000590074 NCAPD3P42695 1498 aa38.55■■■■□ 3.76
FAM20A-203ENST00000590074 WIZO95785 1651 aa38.52■■■■□ 3.76
FAM20A-203ENST00000590074 HMGXB3Q12766 1538 aa38.44■■■■□ 3.74
FAM20A-203ENST00000590074 BAZ1BQ9UIG0 1483 aaKnown RBP38.36■■■■□ 3.73
FAM20A-203ENST00000590074 TOP2AP11388 1531 aaKnown RBP38.1■■■■□ 3.69
FAM20A-203ENST00000590074 SUPT5HO00267 1087 aaKnown RBP37.94■■■■□ 3.66
FAM20A-203ENST00000590074 CCDC88BA6NC98 1476 aa37.64■■■■□ 3.62
FAM20A-203ENST00000590074 NESP48681 1621 aa37.51■■■■□ 3.6
FAM20A-203ENST00000590074 LAMC3Q9Y6N6 1575 aa37.47■■■■□ 3.59
FAM20A-203ENST00000590074 CADPSQ9ULU8 1353 aa37.44■■■■□ 3.58
FAM20A-203ENST00000590074 CFTRP13569 1480 aa37.36■■■■□ 3.57
FAM20A-203ENST00000590074 PRDM2Q13029 1718 aa37.2■■■■□ 3.55
FAM20A-203ENST00000590074 PDS5BQ9NTI5 1447 aa37.16■■■■□ 3.54
FAM20A-203ENST00000590074 KIF21AQ7Z4S6 1674 aa37.12■■■■□ 3.53
FAM20A-203ENST00000590074 ERCC6Q03468 1493 aa37.11■■■■□ 3.53
FAM20A-203ENST00000590074 FANCD2Q9BXW9 1451 aa37.03■■■■□ 3.52
FAM20A-203ENST00000590074 CEP164Q9UPV0 1460 aa36.93■■■■□ 3.5
FAM20A-203ENST00000590074 THOC2Q8NI27 1593 aaKnown RBP36.87■■■■□ 3.49
FAM20A-203ENST00000590074 MRC2Q9UBG0 1479 aa36.77■■■■□ 3.48
FAM20A-203ENST00000590074 WDR62O43379 1518 aa36.67■■■■□ 3.46
FAM20A-203ENST00000590074 URB2Q14146 1524 aaKnown RBP36.66■■■■□ 3.46
FAM20A-203ENST00000590074 CUX2O14529 1486 aa36.55■■■■□ 3.44
FAM20A-203ENST00000590074 DNMBPQ6XZF7 1577 aa36.52■■■■□ 3.44
FAM20A-203ENST00000590074 TOPBP1Q92547 1522 aa36.51■■■■□ 3.44
FAM20A-203ENST00000590074 ABCC8Q09428 1581 aa36.48■■■■□ 3.43
FAM20A-203ENST00000590074 CUX1P39880 1505 aa36.45■■■■□ 3.43
FAM20A-203ENST00000590074 WRNQ14191 1432 aaPredicted RBP eCLIP36.36■■■■□ 3.41
FAM20A-203ENST00000590074 SYNJ1O43426 1573 aa36.31■■■■□ 3.4
FAM20A-203ENST00000590074 BIVM-ERCC5R4GMW8 1640 aa36.28■■■■□ 3.4
FAM20A-203ENST00000590074 TOP2BQ02880 1626 aa36.27■■■■□ 3.4
FAM20A-203ENST00000590074 POLA1P09884 1462 aaPredicted RBP36.24■■■■□ 3.39
FAM20A-203ENST00000590074 FGD5Q6ZNL6 1462 aa36.22■■■■□ 3.39
FAM20A-203ENST00000590074 IFT140Q96RY7 1462 aa36.12■■■■□ 3.37
FAM20A-203ENST00000590074 TARBP1Q13395 1621 aaKnown RBP36.11■■■■□ 3.37
FAM20A-203ENST00000590074 RAD54L2Q9Y4B4 1467 aa36.07■■■■□ 3.36
FAM20A-203ENST00000590074 SOGA1O94964 1423 aa36.06■■■■□ 3.36
FAM20A-203ENST00000590074 WDR97A6NE52 1622 aa35.97■■■■□ 3.35
FAM20A-203ENST00000590074 ZNF608Q9ULD9 1512 aaPredicted RBP35.96■■■■□ 3.35
FAM20A-203ENST00000590074 ABCA10Q8WWZ4 1543 aa35.9■■■■□ 3.34
FAM20A-203ENST00000590074 EIF4G3O43432 1585 aaKnown RBP35.87■■■■□ 3.33
FAM20A-203ENST00000590074 AQRO60306 1485 aaKnown RBP eCLIP35.8■■■■□ 3.321e-6■■■■■ 27.8
FAM20A-203ENST00000590074 TDRD9Q8NDG6 1382 aaKnown RBP35.8■■■■□ 3.32
FAM20A-203ENST00000590074 TRIM41Q8WV44 630 aa35.79■■■■□ 3.32
FAM20A-203ENST00000590074 ABCA5Q8WWZ7 1642 aa35.75■■■■□ 3.31
FAM20A-203ENST00000590074 CHIC1Q5VXU3 224 aa35.72■■■■□ 3.31
FAM20A-203ENST00000590074 GAPVD1Q14C86 1478 aa35.67■■■■□ 3.3
FAM20A-203ENST00000590074 PBRM1Q86U86 1689 aa35.64■■■■□ 3.3
FAM20A-203ENST00000590074 GRIN2BQ13224 1484 aa35.59■■■■□ 3.29
FAM20A-203ENST00000590074 KIF27Q86VH2 1401 aa35.54■■■■□ 3.28
FAM20A-203ENST00000590074 SNAPC4Q5SXM2 1469 aa35.49■■■■□ 3.27
FAM20A-203ENST00000590074 ERICH3Q5RHP9 1530 aa35.48■■■■□ 3.27
FAM20A-203ENST00000590074 MAGI1Q96QZ7 1491 aaPredicted RBP35.46■■■■□ 3.27
FAM20A-203ENST00000590074 RUSC2Q8N2Y8 1516 aa35.43■■■■□ 3.26
FAM20A-203ENST00000590074 ADAMTS12P58397 1594 aa35.36■■■■□ 3.25
FAM20A-203ENST00000590074 IGF1RP08069 1367 aa35.34■■■■□ 3.25
FAM20A-203ENST00000590074 CHD1O14646 1710 aa35.34■■■■□ 3.25
FAM20A-203ENST00000590074 SYNJ2O15056 1496 aa35.3■■■■□ 3.24
FAM20A-203ENST00000590074 CUL7Q14999 1698 aa35.27■■■■□ 3.24
FAM20A-203ENST00000590074 FHAD1B1AJZ9 1412 aa35.26■■■■□ 3.24
FAM20A-203ENST00000590074 FBLN2P98095 1184 aa35.21■■■■□ 3.23
FAM20A-203ENST00000590074 EEA1Q15075 1411 aa35.19■■■■□ 3.22
FAM20A-203ENST00000590074 CHMP7Q8WUX9 453 aaPredicted RBP35.19■■■■□ 3.22
FAM20A-203ENST00000590074 GRIN2AQ12879 1464 aa35.15■■■■□ 3.22
FAM20A-203ENST00000590074 CARMIL1Q5VZK9 1371 aa35.13■■■■□ 3.21
FAM20A-203ENST00000590074 OSCARQ8IYS5 282 aa35.08■■■■□ 3.21
FAM20A-203ENST00000590074 FAM9AQ8IZU1 332 aaPredicted RBP35.06■■■■□ 3.2
FAM20A-203ENST00000590074 CSRNP3Q8WYN3 585 aa35.05■■■■□ 3.2
FAM20A-203ENST00000590074 PRXQ9BXM0 1461 aa35.02■■■■□ 3.2
FAM20A-203ENST00000590074 RAPGEF2Q9Y4G8 1499 aa35■■■■□ 3.19
FAM20A-203ENST00000590074 CEP170Q5SW79 1584 aa34.99■■■■□ 3.19
FAM20A-203ENST00000590074 NUP160Q12769 1436 aa34.97■■■■□ 3.19
FAM20A-203ENST00000590074 CLASP1Q7Z460 1538 aa34.93■■■■□ 3.18
FAM20A-203ENST00000590074 KIF21BO75037 1637 aa34.85■■■■□ 3.17
FAM20A-203ENST00000590074 DNAJC5Q9H3Z4 198 aa34.8■■■■□ 3.16
FAM20A-203ENST00000590074 KIAA0586Q9BVV6 1533 aa34.75■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms