RNA–Protein interactions for RNA: ENST00000589958.1

AC006116.2-201, humanhuman

BASIC

Gene AC006116.2, Length 988 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006116.2-201ENST00000589958 NISCHQ9Y2I1 1504 aa32.51■■■□□ 2.79
AC006116.2-201ENST00000589958 ABCC9O60706 1549 aa29.2■■■□□ 2.27
AC006116.2-201ENST00000589958 CCDC180Q9P1Z9 1646 aa29.12■■■□□ 2.25
AC006116.2-201ENST00000589958 RB1CC1Q8TDY2 1594 aa27.72■■■□□ 2.03
AC006116.2-201ENST00000589958 DCAF8L2P0C7V8 631 aa27.53■■■□□ 2
AC006116.2-201ENST00000589958 NACADO15069 1562 aa27.52■■■□□ 2
AC006116.2-201ENST00000589958 DNAJC5BQ9UF47 199 aa27.41■■□□□ 1.98
AC006116.2-201ENST00000589958 PABPN1Q86U42 306 aaKnown RBP eCLIP27.22■■□□□ 1.95
AC006116.2-201ENST00000589958 UNC13AQ9UPW8 1703 aa27.19■■□□□ 1.94
AC006116.2-201ENST00000589958 MYO15BQ96JP2 1530 aa27.08■■□□□ 1.93
AC006116.2-201ENST00000589958 BICRAQ9NZM4 1560 aa26.97■■□□□ 1.91
AC006116.2-201ENST00000589958 ZCCHC6Q5VYS8 1495 aaKnown RBP26.94■■□□□ 1.9
AC006116.2-201ENST00000589958 DCAF1Q9Y4B6 1507 aa26.78■■□□□ 1.88
AC006116.2-201ENST00000589958 SCRIBQ14160 1630 aa26.64■■□□□ 1.85
AC006116.2-201ENST00000589958 SHROOM4Q9ULL8 1493 aa26.45■■□□□ 1.82
AC006116.2-201ENST00000589958 CC2D2AQ9P2K1 1620 aa26.36■■□□□ 1.81
AC006116.2-201ENST00000589958 EIF4G1Q04637 1599 aaKnown RBP26.29■■□□□ 1.8
AC006116.2-201ENST00000589958 CECR2Q9BXF3 1484 aa26.26■■□□□ 1.79
AC006116.2-201ENST00000589958 NCAPD3P42695 1498 aa25.41■■□□□ 1.66
AC006116.2-201ENST00000589958 ATAD2BQ9ULI0 1458 aa25.38■■□□□ 1.65
AC006116.2-201ENST00000589958 SMARCA4P51532 1647 aa25.37■■□□□ 1.65
AC006116.2-201ENST00000589958 SMARCA2P51531 1590 aa25.27■■□□□ 1.64
AC006116.2-201ENST00000589958 HMGXB3Q12766 1538 aa25.22■■□□□ 1.63
AC006116.2-201ENST00000589958 BAZ1AQ9NRL2 1556 aaPredicted RBP25.2■■□□□ 1.62
AC006116.2-201ENST00000589958 ERCC6Q03468 1493 aa25.17■■□□□ 1.62
AC006116.2-201ENST00000589958 BAZ1BQ9UIG0 1483 aaKnown RBP25.13■■□□□ 1.61
AC006116.2-201ENST00000589958 NESP48681 1621 aa25.11■■□□□ 1.61
AC006116.2-201ENST00000589958 MROH2BQ7Z745 1585 aa25.09■■□□□ 1.61
AC006116.2-201ENST00000589958 PEG3Q9GZU2 1588 aa25.07■■□□□ 1.6
AC006116.2-201ENST00000589958 DNAJC5Q9H3Z4 198 aa25.06■■□□□ 1.6
AC006116.2-201ENST00000589958 CUX2O14529 1486 aa25.06■■□□□ 1.6
AC006116.2-201ENST00000589958 LAMC3Q9Y6N6 1575 aa24.83■■□□□ 1.57
AC006116.2-201ENST00000589958 WIZO95785 1651 aa24.81■■□□□ 1.56
AC006116.2-201ENST00000589958 THOC2Q8NI27 1593 aaKnown RBP24.8■■□□□ 1.56
AC006116.2-201ENST00000589958 KIF21AQ7Z4S6 1674 aa24.78■■□□□ 1.56
AC006116.2-201ENST00000589958 PDS5BQ9NTI5 1447 aa24.69■■□□□ 1.54
AC006116.2-201ENST00000589958 CADPSQ9ULU8 1353 aa24.66■■□□□ 1.54
AC006116.2-201ENST00000589958 RSF1Q96T23 1441 aaPredicted RBP24.55■■□□□ 1.52
AC006116.2-201ENST00000589958 MRC2Q9UBG0 1479 aa24.51■■□□□ 1.51
AC006116.2-201ENST00000589958 WDR62O43379 1518 aa24.44■■□□□ 1.5
AC006116.2-201ENST00000589958 TOP2AP11388 1531 aaKnown RBP24.44■■□□□ 1.5
AC006116.2-201ENST00000589958 CEP164Q9UPV0 1460 aa24.41■■□□□ 1.5
AC006116.2-201ENST00000589958 FANCD2Q9BXW9 1451 aa24.4■■□□□ 1.5
AC006116.2-201ENST00000589958 CFTRP13569 1480 aa24.38■■□□□ 1.49
AC006116.2-201ENST00000589958 URB2Q14146 1524 aaKnown RBP24.22■■□□□ 1.47
AC006116.2-201ENST00000589958 CCDC88BA6NC98 1476 aa24.19■■□□□ 1.46
AC006116.2-201ENST00000589958 PRDM2Q13029 1718 aa24.17■■□□□ 1.46
AC006116.2-201ENST00000589958 TRIM41Q8WV44 630 aa24.07■■□□□ 1.44
AC006116.2-201ENST00000589958 OSCARQ8IYS5 282 aa23.95■■□□□ 1.42
AC006116.2-201ENST00000589958 TOPBP1Q92547 1522 aa23.94■■□□□ 1.42
AC006116.2-201ENST00000589958 ZNF608Q9ULD9 1512 aaPredicted RBP23.94■■□□□ 1.42
AC006116.2-201ENST00000589958 IFT140Q96RY7 1462 aa23.91■■□□□ 1.42
AC006116.2-201ENST00000589958 DNMBPQ6XZF7 1577 aa23.84■■□□□ 1.41
AC006116.2-201ENST00000589958 ABCC8Q09428 1581 aa23.82■■□□□ 1.4
AC006116.2-201ENST00000589958 EIF4G3O43432 1585 aaKnown RBP23.78■■□□□ 1.4
AC006116.2-201ENST00000589958 TARBP1Q13395 1621 aaKnown RBP23.73■■□□□ 1.39
AC006116.2-201ENST00000589958 AQRO60306 1485 aaKnown RBP eCLIP23.73■■□□□ 1.39
AC006116.2-201ENST00000589958 POLA1P09884 1462 aaPredicted RBP23.71■■□□□ 1.39
AC006116.2-201ENST00000589958 RIMBP3CA6NJZ7 1639 aa23.69■■□□□ 1.38
AC006116.2-201ENST00000589958 RIMBP3BA6NNM3 1639 aa23.69■■□□□ 1.38
AC006116.2-201ENST00000589958 RIMBP3Q9UFD9 1639 aa23.69■■□□□ 1.38
AC006116.2-201ENST00000589958 RAD54L2Q9Y4B4 1467 aa23.68■■□□□ 1.38
AC006116.2-201ENST00000589958 CHD1O14646 1710 aa23.64■■□□□ 1.37
AC006116.2-201ENST00000589958 ARHGEF11O15085 1522 aa23.59■■□□□ 1.37
AC006116.2-201ENST00000589958 SOGA1O94964 1423 aa23.59■■□□□ 1.37
AC006116.2-201ENST00000589958 TDRD9Q8NDG6 1382 aaKnown RBP23.58■■□□□ 1.37
AC006116.2-201ENST00000589958 FBLN2P98095 1184 aa23.58■■□□□ 1.37
AC006116.2-201ENST00000589958 FGD5Q6ZNL6 1462 aa23.57■■□□□ 1.36
AC006116.2-201ENST00000589958 SUPT5HO00267 1087 aaKnown RBP23.57■■□□□ 1.36
AC006116.2-201ENST00000589958 CUX1P39880 1505 aa23.56■■□□□ 1.36
AC006116.2-201ENST00000589958 SNAPC4Q5SXM2 1469 aa23.46■■□□□ 1.35
AC006116.2-201ENST00000589958 CYB5RLQ6IPT4 315 aa23.46■■□□□ 1.35
AC006116.2-201ENST00000589958 WDR97A6NE52 1622 aa23.41■■□□□ 1.34
AC006116.2-201ENST00000589958 ARAP1Q96P48 1450 aa23.37■■□□□ 1.33
AC006116.2-201ENST00000589958 GRIN2BQ13224 1484 aa23.36■■□□□ 1.33
AC006116.2-201ENST00000589958 CHMP7Q8WUX9 453 aaPredicted RBP23.36■■□□□ 1.33
AC006116.2-201ENST00000589958 MAGI1Q96QZ7 1491 aaPredicted RBP23.34■■□□□ 1.33
AC006116.2-201ENST00000589958 PBRM1Q86U86 1689 aa23.33■■□□□ 1.33
AC006116.2-201ENST00000589958 CLASP1Q7Z460 1538 aa23.31■■□□□ 1.32
AC006116.2-201ENST00000589958 GAPVD1Q14C86 1478 aa23.3■■□□□ 1.32
AC006116.2-201ENST00000589958 SYNJ1O43426 1573 aa23.28■■□□□ 1.32
AC006116.2-201ENST00000589958 SYNJ2O15056 1496 aa23.28■■□□□ 1.32
AC006116.2-201ENST00000589958 ABCA10Q8WWZ4 1543 aa23.27■■□□□ 1.32
AC006116.2-201ENST00000589958 ABCA5Q8WWZ7 1642 aa23.25■■□□□ 1.31
AC006116.2-201ENST00000589958 TRHP20396 242 aaPredicted RBP23.19■■□□□ 1.3
AC006116.2-201ENST00000589958 BIVM-ERCC5R4GMW8 1640 aa23.17■■□□□ 1.3
AC006116.2-201ENST00000589958 WRNQ14191 1432 aaPredicted RBP eCLIP23.16■■□□□ 1.3
AC006116.2-201ENST00000589958 TOP2BQ02880 1626 aa23.16■■□□□ 1.3
AC006116.2-201ENST00000589958 GRIN2AQ12879 1464 aa23.08■■□□□ 1.29
AC006116.2-201ENST00000589958 ADAMTS12P58397 1594 aa23.08■■□□□ 1.29
AC006116.2-201ENST00000589958 CEP170Q5SW79 1584 aa23.03■■□□□ 1.28
AC006116.2-201ENST00000589958 ERCC6L2Q5T890 1561 aa23.03■■□□□ 1.28
AC006116.2-201ENST00000589958 FHAD1B1AJZ9 1412 aa22.99■■□□□ 1.27
AC006116.2-201ENST00000589958 NUP160Q12769 1436 aa22.99■■□□□ 1.27
AC006116.2-201ENST00000589958 ERICH3Q5RHP9 1530 aa22.96■■□□□ 1.27
AC006116.2-201ENST00000589958 SHROOM2Q13796 1616 aa22.89■■□□□ 1.25
AC006116.2-201ENST00000589958 PRG4Q92954 1404 aaPredicted RBP22.79■■□□□ 1.24
AC006116.2-201ENST00000589958 JPH4Q96JJ6 628 aa22.77■■□□□ 1.24
AC006116.2-201ENST00000589958 RUSC2Q8N2Y8 1516 aa22.75■■□□□ 1.23
AC006116.2-201ENST00000589958 IGF1RP08069 1367 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms