RNA–Protein interactions for RNA: ENST00000589740.1

AC025048.4-201, humanhuman

TSL 3 BASIC

Gene AC025048.4, Length 699 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025048.4-201ENST00000589740 NISCHQ9Y2I1 1504 aa31.29■■■□□ 2.6
AC025048.4-201ENST00000589740 CCDC180Q9P1Z9 1646 aa27.75■■■□□ 2.03
AC025048.4-201ENST00000589740 ABCC9O60706 1549 aa26.65■■□□□ 1.86
AC025048.4-201ENST00000589740 ZCCHC6Q5VYS8 1495 aaKnown RBP26.17■■□□□ 1.78
AC025048.4-201ENST00000589740 NACADO15069 1562 aa25.95■■□□□ 1.74
AC025048.4-201ENST00000589740 DCAF1Q9Y4B6 1507 aa25.94■■□□□ 1.74
AC025048.4-201ENST00000589740 DCAF8L2P0C7V8 631 aa25.94■■□□□ 1.74
AC025048.4-201ENST00000589740 MYO15BQ96JP2 1530 aa25.9■■□□□ 1.74
AC025048.4-201ENST00000589740 RB1CC1Q8TDY2 1594 aa25.9■■□□□ 1.74
AC025048.4-201ENST00000589740 UNC13AQ9UPW8 1703 aa25.32■■□□□ 1.64
AC025048.4-201ENST00000589740 SCRIBQ14160 1630 aa25.3■■□□□ 1.64
AC025048.4-201ENST00000589740 BICRAQ9NZM4 1560 aa25.01■■□□□ 1.59
AC025048.4-201ENST00000589740 SHROOM4Q9ULL8 1493 aa24.93■■□□□ 1.58
AC025048.4-201ENST00000589740 PABPN1Q86U42 306 aaKnown RBP eCLIP24.91■■□□□ 1.58
AC025048.4-201ENST00000589740 EIF4G1Q04637 1599 aaKnown RBP24.36■■□□□ 1.49
AC025048.4-201ENST00000589740 CECR2Q9BXF3 1484 aa24.28■■□□□ 1.48
AC025048.4-201ENST00000589740 BAZ1AQ9NRL2 1556 aaPredicted RBP24.28■■□□□ 1.48
AC025048.4-201ENST00000589740 SMARCA4P51532 1647 aa24.24■■□□□ 1.47
AC025048.4-201ENST00000589740 CC2D2AQ9P2K1 1620 aa24.16■■□□□ 1.46
AC025048.4-201ENST00000589740 MROH2BQ7Z745 1585 aa24.1■■□□□ 1.45
AC025048.4-201ENST00000589740 SMARCA2P51531 1590 aa24.01■■□□□ 1.43
AC025048.4-201ENST00000589740 PEG3Q9GZU2 1588 aa23.99■■□□□ 1.43
AC025048.4-201ENST00000589740 RSF1Q96T23 1441 aaPredicted RBP23.96■■□□□ 1.43
AC025048.4-201ENST00000589740 DNAJC5BQ9UF47 199 aa23.96■■□□□ 1.43
AC025048.4-201ENST00000589740 ATAD2BQ9ULI0 1458 aa23.95■■□□□ 1.42
AC025048.4-201ENST00000589740 WIZO95785 1651 aa23.9■■□□□ 1.42
AC025048.4-201ENST00000589740 NCAPD3P42695 1498 aa23.87■■□□□ 1.41
AC025048.4-201ENST00000589740 HMGXB3Q12766 1538 aa23.86■■□□□ 1.41
AC025048.4-201ENST00000589740 BAZ1BQ9UIG0 1483 aaKnown RBP23.82■■□□□ 1.4
AC025048.4-201ENST00000589740 TOP2AP11388 1531 aaKnown RBP23.7■■□□□ 1.38
AC025048.4-201ENST00000589740 SUPT5HO00267 1087 aaKnown RBP23.65■■□□□ 1.38
AC025048.4-201ENST00000589740 CCDC88BA6NC98 1476 aa23.36■■□□□ 1.33
AC025048.4-201ENST00000589740 LAMC3Q9Y6N6 1575 aa23.25■■□□□ 1.31
AC025048.4-201ENST00000589740 CADPSQ9ULU8 1353 aa23.19■■□□□ 1.3
AC025048.4-201ENST00000589740 PRDM2Q13029 1718 aa23.16■■□□□ 1.3
AC025048.4-201ENST00000589740 NESP48681 1621 aa23.16■■□□□ 1.3
AC025048.4-201ENST00000589740 CFTRP13569 1480 aa23.15■■□□□ 1.3
AC025048.4-201ENST00000589740 PDS5BQ9NTI5 1447 aa23.05■■□□□ 1.28
AC025048.4-201ENST00000589740 ERCC6Q03468 1493 aa23■■□□□ 1.27
AC025048.4-201ENST00000589740 KIF21AQ7Z4S6 1674 aa23■■□□□ 1.27
AC025048.4-201ENST00000589740 FANCD2Q9BXW9 1451 aa22.96■■□□□ 1.27
AC025048.4-201ENST00000589740 CEP164Q9UPV0 1460 aa22.93■■□□□ 1.26
AC025048.4-201ENST00000589740 THOC2Q8NI27 1593 aaKnown RBP22.8■■□□□ 1.24
AC025048.4-201ENST00000589740 MRC2Q9UBG0 1479 aa22.79■■□□□ 1.24
AC025048.4-201ENST00000589740 WDR62O43379 1518 aa22.71■■□□□ 1.23
AC025048.4-201ENST00000589740 ABCC8Q09428 1581 aa22.71■■□□□ 1.23
AC025048.4-201ENST00000589740 DNMBPQ6XZF7 1577 aa22.68■■□□□ 1.22
AC025048.4-201ENST00000589740 URB2Q14146 1524 aaKnown RBP22.68■■□□□ 1.22
AC025048.4-201ENST00000589740 TOPBP1Q92547 1522 aa22.64■■□□□ 1.21
AC025048.4-201ENST00000589740 WRNQ14191 1432 aaPredicted RBP eCLIP22.63■■□□□ 1.21
AC025048.4-201ENST00000589740 CUX1P39880 1505 aa22.61■■□□□ 1.21
AC025048.4-201ENST00000589740 CUX2O14529 1486 aa22.6■■□□□ 1.21
AC025048.4-201ENST00000589740 BIVM-ERCC5R4GMW8 1640 aa22.58■■□□□ 1.21
AC025048.4-201ENST00000589740 TOP2BQ02880 1626 aa22.56■■□□□ 1.2
AC025048.4-201ENST00000589740 SYNJ1O43426 1573 aa22.55■■□□□ 1.2
AC025048.4-201ENST00000589740 FGD5Q6ZNL6 1462 aa22.48■■□□□ 1.19
AC025048.4-201ENST00000589740 POLA1P09884 1462 aaPredicted RBP22.47■■□□□ 1.19
AC025048.4-201ENST00000589740 IFT140Q96RY7 1462 aa22.41■■□□□ 1.18
AC025048.4-201ENST00000589740 TARBP1Q13395 1621 aaKnown RBP22.37■■□□□ 1.17
AC025048.4-201ENST00000589740 SOGA1O94964 1423 aa22.37■■□□□ 1.17
AC025048.4-201ENST00000589740 TRIM41Q8WV44 630 aa22.34■■□□□ 1.17
AC025048.4-201ENST00000589740 WDR97A6NE52 1622 aa22.33■■□□□ 1.17
AC025048.4-201ENST00000589740 RAD54L2Q9Y4B4 1467 aa22.33■■□□□ 1.16
AC025048.4-201ENST00000589740 ABCA10Q8WWZ4 1543 aa22.29■■□□□ 1.16
AC025048.4-201ENST00000589740 CHIC1Q5VXU3 224 aa22.28■■□□□ 1.16
AC025048.4-201ENST00000589740 EIF4G3O43432 1585 aaKnown RBP22.24■■□□□ 1.15
AC025048.4-201ENST00000589740 ZNF608Q9ULD9 1512 aaPredicted RBP22.21■■□□□ 1.15
AC025048.4-201ENST00000589740 ABCA5Q8WWZ7 1642 aa22.2■■□□□ 1.14
AC025048.4-201ENST00000589740 TDRD9Q8NDG6 1382 aaKnown RBP22.16■■□□□ 1.14
AC025048.4-201ENST00000589740 PBRM1Q86U86 1689 aa22.15■■□□□ 1.14
AC025048.4-201ENST00000589740 AQRO60306 1485 aaKnown RBP eCLIP22.14■■□□□ 1.13
AC025048.4-201ENST00000589740 GAPVD1Q14C86 1478 aa22.14■■□□□ 1.13
AC025048.4-201ENST00000589740 KIF27Q86VH2 1401 aa22.14■■□□□ 1.13
AC025048.4-201ENST00000589740 GRIN2BQ13224 1484 aa22.09■■□□□ 1.13
AC025048.4-201ENST00000589740 ERICH3Q5RHP9 1530 aa22.06■■□□□ 1.12
AC025048.4-201ENST00000589740 EEA1Q15075 1411 aa22.01■■□□□ 1.11
AC025048.4-201ENST00000589740 MAGI1Q96QZ7 1491 aaPredicted RBP22.01■■□□□ 1.11
AC025048.4-201ENST00000589740 SNAPC4Q5SXM2 1469 aa22■■□□□ 1.11
AC025048.4-201ENST00000589740 CUL7Q14999 1698 aa21.98■■□□□ 1.11
AC025048.4-201ENST00000589740 RUSC2Q8N2Y8 1516 aa21.97■■□□□ 1.11
AC025048.4-201ENST00000589740 ADAMTS12P58397 1594 aa21.96■■□□□ 1.11
AC025048.4-201ENST00000589740 IGF1RP08069 1367 aa21.91■■□□□ 1.1
AC025048.4-201ENST00000589740 CHD1O14646 1710 aa21.91■■□□□ 1.1
AC025048.4-201ENST00000589740 FHAD1B1AJZ9 1412 aa21.9■■□□□ 1.1
AC025048.4-201ENST00000589740 SYNJ2O15056 1496 aa21.9■■□□□ 1.1
AC025048.4-201ENST00000589740 FAM9AQ8IZU1 332 aaPredicted RBP21.84■■□□□ 1.09
AC025048.4-201ENST00000589740 CARMIL1Q5VZK9 1371 aa21.84■■□□□ 1.09
AC025048.4-201ENST00000589740 CHMP7Q8WUX9 453 aaPredicted RBP21.83■■□□□ 1.09
AC025048.4-201ENST00000589740 CSRNP3Q8WYN3 585 aa21.83■■□□□ 1.09
AC025048.4-201ENST00000589740 FBLN2P98095 1184 aa21.82■■□□□ 1.08
AC025048.4-201ENST00000589740 GRIN2AQ12879 1464 aa21.81■■□□□ 1.08
AC025048.4-201ENST00000589740 RAPGEF2Q9Y4G8 1499 aa21.78■■□□□ 1.08
AC025048.4-201ENST00000589740 PRXQ9BXM0 1461 aa21.77■■□□□ 1.08
AC025048.4-201ENST00000589740 KIF21BO75037 1637 aa21.77■■□□□ 1.07
AC025048.4-201ENST00000589740 CEP170Q5SW79 1584 aa21.68■■□□□ 1.06
AC025048.4-201ENST00000589740 NUP160Q12769 1436 aa21.67■■□□□ 1.06
AC025048.4-201ENST00000589740 OSCARQ8IYS5 282 aa21.67■■□□□ 1.06
AC025048.4-201ENST00000589740 CTTNBP2Q8WZ74 1663 aa21.66■■□□□ 1.06
AC025048.4-201ENST00000589740 GOLGA3Q08378 1498 aa21.64■■□□□ 1.06
AC025048.4-201ENST00000589740 CLASP1Q7Z460 1538 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms