RNA–Protein interactions for RNA: ENST00000589729.1

AC040963.1-202, humanhuman

TSL 5 BASIC

Gene AC040963.1, Length 644 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040963.1-202ENST00000589729 NISCHQ9Y2I1 1504 aa40.73■■■■■ 4.11
AC040963.1-202ENST00000589729 CCDC180Q9P1Z9 1646 aa36.18■■■■□ 3.38
AC040963.1-202ENST00000589729 ABCC9O60706 1549 aa35.32■■■■□ 3.25
AC040963.1-202ENST00000589729 ZCCHC6Q5VYS8 1495 aaKnown RBP34.01■■■■□ 3.03
AC040963.1-202ENST00000589729 DCAF8L2P0C7V8 631 aa33.93■■■■□ 3.02
AC040963.1-202ENST00000589729 RB1CC1Q8TDY2 1594 aa33.93■■■■□ 3.02
AC040963.1-202ENST00000589729 NACADO15069 1562 aa33.89■■■■□ 3.02
AC040963.1-202ENST00000589729 MYO15BQ96JP2 1530 aa33.64■■■□□ 2.98
AC040963.1-202ENST00000589729 DCAF1Q9Y4B6 1507 aa33.61■■■□□ 2.97
AC040963.1-202ENST00000589729 UNC13AQ9UPW8 1703 aa33.4■■■□□ 2.94
AC040963.1-202ENST00000589729 SCRIBQ14160 1630 aa33.17■■■□□ 2.9
AC040963.1-202ENST00000589729 BICRAQ9NZM4 1560 aa33.02■■■□□ 2.88
AC040963.1-202ENST00000589729 PABPN1Q86U42 306 aaKnown RBP eCLIP32.99■■■□□ 2.87
AC040963.1-202ENST00000589729 SHROOM4Q9ULL8 1493 aa32.44■■■□□ 2.78
AC040963.1-202ENST00000589729 DNAJC5BQ9UF47 199 aa32.25■■■□□ 2.75
AC040963.1-202ENST00000589729 EIF4G1Q04637 1599 aaKnown RBP32.1■■■□□ 2.73
AC040963.1-202ENST00000589729 CC2D2AQ9P2K1 1620 aa31.96■■■□□ 2.71
AC040963.1-202ENST00000589729 CECR2Q9BXF3 1484 aa31.81■■■□□ 2.68
AC040963.1-202ENST00000589729 SMARCA4P51532 1647 aa31.65■■■□□ 2.66
AC040963.1-202ENST00000589729 BAZ1AQ9NRL2 1556 aaPredicted RBP31.54■■■□□ 2.64
AC040963.1-202ENST00000589729 MROH2BQ7Z745 1585 aa31.48■■■□□ 2.63
AC040963.1-202ENST00000589729 ATAD2BQ9ULI0 1458 aa31.36■■■□□ 2.61
AC040963.1-202ENST00000589729 SMARCA2P51531 1590 aa31.29■■■□□ 2.6
AC040963.1-202ENST00000589729 PEG3Q9GZU2 1588 aa31.24■■■□□ 2.59
AC040963.1-202ENST00000589729 NCAPD3P42695 1498 aa31.23■■■□□ 2.59
AC040963.1-202ENST00000589729 WIZO95785 1651 aa31.22■■■□□ 2.59
AC040963.1-202ENST00000589729 HMGXB3Q12766 1538 aa31.18■■■□□ 2.58
AC040963.1-202ENST00000589729 BAZ1BQ9UIG0 1483 aaKnown RBP31.13■■■□□ 2.57
AC040963.1-202ENST00000589729 RSF1Q96T23 1441 aaPredicted RBP31.09■■■□□ 2.57
AC040963.1-202ENST00000589729 TOP2AP11388 1531 aaKnown RBP30.79■■■□□ 2.52
AC040963.1-202ENST00000589729 NESP48681 1621 aa30.65■■■□□ 2.5
AC040963.1-202ENST00000589729 LAMC3Q9Y6N6 1575 aa30.45■■■□□ 2.46
AC040963.1-202ENST00000589729 SUPT5HO00267 1087 aaKnown RBP30.44■■■□□ 2.46
AC040963.1-202ENST00000589729 CCDC88BA6NC98 1476 aa30.4■■■□□ 2.46
AC040963.1-202ENST00000589729 ERCC6Q03468 1493 aa30.36■■■□□ 2.45
AC040963.1-202ENST00000589729 KIF21AQ7Z4S6 1674 aa30.35■■■□□ 2.45
AC040963.1-202ENST00000589729 CADPSQ9ULU8 1353 aa30.34■■■□□ 2.45
AC040963.1-202ENST00000589729 CFTRP13569 1480 aa30.23■■■□□ 2.43
AC040963.1-202ENST00000589729 PRDM2Q13029 1718 aa30.19■■■□□ 2.42
AC040963.1-202ENST00000589729 THOC2Q8NI27 1593 aaKnown RBP30.16■■■□□ 2.42
AC040963.1-202ENST00000589729 PDS5BQ9NTI5 1447 aa30.15■■■□□ 2.42
AC040963.1-202ENST00000589729 FANCD2Q9BXW9 1451 aa30.08■■■□□ 2.41
AC040963.1-202ENST00000589729 CEP164Q9UPV0 1460 aa30.03■■■□□ 2.4
AC040963.1-202ENST00000589729 MRC2Q9UBG0 1479 aa29.95■■■□□ 2.39
AC040963.1-202ENST00000589729 CUX2O14529 1486 aa29.91■■■□□ 2.38
AC040963.1-202ENST00000589729 WDR62O43379 1518 aa29.88■■■□□ 2.37
AC040963.1-202ENST00000589729 URB2Q14146 1524 aaKnown RBP29.85■■■□□ 2.37
AC040963.1-202ENST00000589729 TOPBP1Q92547 1522 aa29.65■■■□□ 2.34
AC040963.1-202ENST00000589729 DNMBPQ6XZF7 1577 aa29.62■■■□□ 2.33
AC040963.1-202ENST00000589729 CUX1P39880 1505 aa29.54■■■□□ 2.32
AC040963.1-202ENST00000589729 ABCC8Q09428 1581 aa29.48■■■□□ 2.31
AC040963.1-202ENST00000589729 POLA1P09884 1462 aaPredicted RBP29.41■■■□□ 2.3
AC040963.1-202ENST00000589729 FGD5Q6ZNL6 1462 aa29.38■■■□□ 2.29
AC040963.1-202ENST00000589729 SYNJ1O43426 1573 aa29.38■■■□□ 2.29
AC040963.1-202ENST00000589729 ZNF608Q9ULD9 1512 aaPredicted RBP29.35■■■□□ 2.29
AC040963.1-202ENST00000589729 TARBP1Q13395 1621 aaKnown RBP29.34■■■□□ 2.29
AC040963.1-202ENST00000589729 IFT140Q96RY7 1462 aa29.34■■■□□ 2.29
AC040963.1-202ENST00000589729 RAD54L2Q9Y4B4 1467 aa29.32■■■□□ 2.28
AC040963.1-202ENST00000589729 BIVM-ERCC5R4GMW8 1640 aa29.3■■■□□ 2.28
AC040963.1-202ENST00000589729 WRNQ14191 1432 aaPredicted RBP eCLIP29.29■■■□□ 2.28
AC040963.1-202ENST00000589729 TOP2BQ02880 1626 aa29.27■■■□□ 2.28
AC040963.1-202ENST00000589729 EIF4G3O43432 1585 aaKnown RBP29.26■■■□□ 2.28
AC040963.1-202ENST00000589729 WDR97A6NE52 1622 aa29.22■■■□□ 2.27
AC040963.1-202ENST00000589729 SOGA1O94964 1423 aa29.2■■■□□ 2.26
AC040963.1-202ENST00000589729 AQRO60306 1485 aaKnown RBP eCLIP29.13■■■□□ 2.25
AC040963.1-202ENST00000589729 TDRD9Q8NDG6 1382 aaKnown RBP29.08■■■□□ 2.25
AC040963.1-202ENST00000589729 ABCA10Q8WWZ4 1543 aa29.03■■■□□ 2.24
AC040963.1-202ENST00000589729 ABCA5Q8WWZ7 1642 aa29.01■■■□□ 2.23
AC040963.1-202ENST00000589729 PBRM1Q86U86 1689 aa29■■■□□ 2.23
AC040963.1-202ENST00000589729 CHD1O14646 1710 aa28.91■■■□□ 2.22
AC040963.1-202ENST00000589729 GAPVD1Q14C86 1478 aa28.91■■■□□ 2.22
AC040963.1-202ENST00000589729 SNAPC4Q5SXM2 1469 aa28.91■■■□□ 2.22
AC040963.1-202ENST00000589729 GRIN2BQ13224 1484 aa28.85■■■□□ 2.21
AC040963.1-202ENST00000589729 DNAJC5Q9H3Z4 198 aa28.76■■■□□ 2.19
AC040963.1-202ENST00000589729 MAGI1Q96QZ7 1491 aaPredicted RBP28.76■■■□□ 2.19
AC040963.1-202ENST00000589729 ADAMTS12P58397 1594 aa28.74■■■□□ 2.19
AC040963.1-202ENST00000589729 FBLN2P98095 1184 aa28.69■■■□□ 2.18
AC040963.1-202ENST00000589729 ERICH3Q5RHP9 1530 aa28.67■■■□□ 2.18
AC040963.1-202ENST00000589729 SYNJ2O15056 1496 aa28.66■■■□□ 2.18
AC040963.1-202ENST00000589729 TRIM41Q8WV44 630 aa28.62■■■□□ 2.17
AC040963.1-202ENST00000589729 KIF27Q86VH2 1401 aa28.61■■■□□ 2.17
AC040963.1-202ENST00000589729 OSCARQ8IYS5 282 aa28.61■■■□□ 2.17
AC040963.1-202ENST00000589729 RUSC2Q8N2Y8 1516 aa28.59■■■□□ 2.17
AC040963.1-202ENST00000589729 CHMP7Q8WUX9 453 aaPredicted RBP28.56■■■□□ 2.16
AC040963.1-202ENST00000589729 GRIN2AQ12879 1464 aa28.53■■■□□ 2.16
AC040963.1-202ENST00000589729 FHAD1B1AJZ9 1412 aa28.53■■■□□ 2.16
AC040963.1-202ENST00000589729 CUL7Q14999 1698 aa28.5■■■□□ 2.15
AC040963.1-202ENST00000589729 CLASP1Q7Z460 1538 aa28.49■■■□□ 2.15
AC040963.1-202ENST00000589729 CEP170Q5SW79 1584 aa28.49■■■□□ 2.15
AC040963.1-202ENST00000589729 IGF1RP08069 1367 aa28.49■■■□□ 2.15
AC040963.1-202ENST00000589729 CHIC1Q5VXU3 224 aa28.44■■■□□ 2.14
AC040963.1-202ENST00000589729 RIMBP3CA6NJZ7 1639 aa28.4■■■□□ 2.14
AC040963.1-202ENST00000589729 RIMBP3BA6NNM3 1639 aa28.4■■■□□ 2.14
AC040963.1-202ENST00000589729 RIMBP3Q9UFD9 1639 aa28.4■■■□□ 2.14
AC040963.1-202ENST00000589729 NUP160Q12769 1436 aa28.37■■■□□ 2.13
AC040963.1-202ENST00000589729 ARHGEF11O15085 1522 aa28.34■■■□□ 2.13
AC040963.1-202ENST00000589729 CARMIL1Q5VZK9 1371 aa28.33■■■□□ 2.13
AC040963.1-202ENST00000589729 ERCC6L2Q5T890 1561 aa28.23■■■□□ 2.11
AC040963.1-202ENST00000589729 SHROOM2Q13796 1616 aa28.21■■■□□ 2.11
AC040963.1-202ENST00000589729 RAPGEF2Q9Y4G8 1499 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms