RNA–Protein interactions for RNA: ENST00000589717.1

ZNF253-203, Transcript of zinc finger protein 253, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF253, Length 3,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253-203ENST00000589717 NISCHQ9Y2I1 1504 aa12□□□□□ -0.49
ZNF253-203ENST00000589717 MYO15BQ96JP2 1530 aa10.43□□□□□ -0.74
ZNF253-203ENST00000589717 ZCCHC6Q5VYS8 1495 aaKnown RBP10.32□□□□□ -0.76
ZNF253-203ENST00000589717 CCDC180Q9P1Z9 1646 aa10.28□□□□□ -0.76
ZNF253-203ENST00000589717 HRCP23327 699 aa10.24□□□□□ -0.77
ZNF253-203ENST00000589717 DCAF1Q9Y4B6 1507 aa10.14□□□□□ -0.79
ZNF253-203ENST00000589717 CHIC1Q5VXU3 224 aa9.98□□□□□ -0.81
ZNF253-203ENST00000589717 SHROOM4Q9ULL8 1493 aa9.89□□□□□ -0.83
ZNF253-203ENST00000589717 PPARGC1BQ86YN6 1023 aaKnown RBP9.87□□□□□ -0.83
ZNF253-203ENST00000589717 ABCC9O60706 1549 aa9.86□□□□□ -0.83
ZNF253-203ENST00000589717 EIF4G1Q04637 1599 aaKnown RBP9.77□□□□□ -0.85
ZNF253-203ENST00000589717 PCGF6Q9BYE7 350 aa9.71□□□□□ -0.85
ZNF253-203ENST00000589717 SUPT5HO00267 1087 aaKnown RBP9.7□□□□□ -0.86
ZNF253-203ENST00000589717 SCAF1Q9H7N4 1312 aaKnown RBP9.69□□□□□ -0.86
ZNF253-203ENST00000589717 PELP1Q8IZL8 1130 aaKnown RBP9.65□□□□□ -0.87
ZNF253-203ENST00000589717 RB1CC1Q8TDY2 1594 aa9.6□□□□□ -0.87
ZNF253-203ENST00000589717 TRIM26Q12899 539 aaPredicted RBP9.6□□□□□ -0.87
ZNF253-203ENST00000589717 DCAF8L2P0C7V8 631 aa9.59□□□□□ -0.87
ZNF253-203ENST00000589717 RSF1Q96T23 1441 aaPredicted RBP9.55□□□□□ -0.88
ZNF253-203ENST00000589717 LOC105371045A0A1W2PR82 267 aa9.55□□□□□ -0.88
ZNF253-203ENST00000589717 NACADO15069 1562 aa9.45□□□□□ -0.9
ZNF253-203ENST00000589717 ZEB1P37275 1124 aaPredicted RBP9.44□□□□□ -0.9
ZNF253-203ENST00000589717 WRNQ14191 1432 aaPredicted RBP eCLIP9.42□□□□□ -0.9
ZNF253-203ENST00000589717 BAZ1AQ9NRL2 1556 aaPredicted RBP9.41□□□□□ -0.9
ZNF253-203ENST00000589717 WIZO95785 1651 aa9.35□□□□□ -0.91
ZNF253-203ENST00000589717 ACIN1Q9UKV3 1341 aaKnown RBP9.35□□□□□ -0.91
ZNF253-203ENST00000589717 SCRIBQ14160 1630 aa9.35□□□□□ -0.91
ZNF253-203ENST00000589717 MROH2BQ7Z745 1585 aa9.33□□□□□ -0.92
ZNF253-203ENST00000589717 NEUROD1Q13562 356 aa9.33□□□□□ -0.92
ZNF253-203ENST00000589717 TRIM41Q8WV44 630 aa9.28□□□□□ -0.92
ZNF253-203ENST00000589717 CECR2Q9BXF3 1484 aa9.26□□□□□ -0.93
ZNF253-203ENST00000589717 UNC13AQ9UPW8 1703 aa9.22□□□□□ -0.93
ZNF253-203ENST00000589717 SMARCA2P51531 1590 aa9.22□□□□□ -0.93
ZNF253-203ENST00000589717 MYT1Q01538 1121 aa9.21□□□□□ -0.93
ZNF253-203ENST00000589717 TOP2AP11388 1531 aaKnown RBP9.21□□□□□ -0.94
ZNF253-203ENST00000589717 ABCC8Q09428 1581 aa9.17□□□□□ -0.94
ZNF253-203ENST00000589717 KIF21BO75037 1637 aa9.16□□□□□ -0.94
ZNF253-203ENST00000589717 CCDC88BA6NC98 1476 aa9.14□□□□□ -0.95
ZNF253-203ENST00000589717 PEG3Q9GZU2 1588 aa9.13□□□□□ -0.95
ZNF253-203ENST00000589717 SMARCA4P51532 1647 aa9.13□□□□□ -0.95
ZNF253-203ENST00000589717 GTF3C3Q9Y5Q9 886 aa9.13□□□□□ -0.95
ZNF253-203ENST00000589717 CEP162Q5TB80 1403 aa9.1□□□□□ -0.95
ZNF253-203ENST00000589717 TNIKQ9UKE5 1360 aa9.1□□□□□ -0.95
ZNF253-203ENST00000589717 CUX2O14529 1486 aa9.07□□□□□ -0.96
ZNF253-203ENST00000589717 RUSC2Q8N2Y8 1516 aa9.06□□□□□ -0.96
ZNF253-203ENST00000589717 DIEXFQ68CQ4 756 aaKnown RBP9.05□□□□□ -0.96
ZNF253-203ENST00000589717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.04□□□□□ -0.96
ZNF253-203ENST00000589717 SYNJ1O43426 1573 aa9.03□□□□□ -0.96
ZNF253-203ENST00000589717 SOGA1O94964 1423 aa9.03□□□□□ -0.96
ZNF253-203ENST00000589717 EEA1Q15075 1411 aa9.03□□□□□ -0.96
ZNF253-203ENST00000589717 BIVM-ERCC5R4GMW8 1640 aa9□□□□□ -0.97
ZNF253-203ENST00000589717 PABPN1Q86U42 306 aaKnown RBP eCLIP8.99□□□□□ -0.97
ZNF253-203ENST00000589717 BAZ1BQ9UIG0 1483 aaKnown RBP8.99□□□□□ -0.97
ZNF253-203ENST00000589717 ZNF316A6NFI3 1004 aaPredicted RBP8.97□□□□□ -0.97
ZNF253-203ENST00000589717 GOLGA3Q08378 1498 aa8.96□□□□□ -0.98
ZNF253-203ENST00000589717 BICRAQ9NZM4 1560 aa8.94□□□□□ -0.98
ZNF253-203ENST00000589717 MIER1Q8N108 512 aa8.93□□□□□ -0.98
ZNF253-203ENST00000589717 CENPBP07199 599 aaPredicted RBP8.92□□□□□ -0.98
ZNF253-203ENST00000589717 MAPKBP1O60336 1514 aa8.91□□□□□ -0.98
ZNF253-203ENST00000589717 CLIP1P30622 1438 aa8.91□□□□□ -0.98
ZNF253-203ENST00000589717 TOP2BQ02880 1626 aa8.91□□□□□ -0.98
ZNF253-203ENST00000589717 VPS8Q8N3P4 1428 aa8.9□□□□□ -0.98
ZNF253-203ENST00000589717 ERICH3Q5RHP9 1530 aa8.9□□□□□ -0.98
ZNF253-203ENST00000589717 ARAP1Q96P48 1450 aa8.9□□□□□ -0.99
ZNF253-203ENST00000589717 RRBP1Q9P2E9 1410 aaKnown RBP8.89□□□□□ -0.99
ZNF253-203ENST00000589717 DHX57Q6P158 1386 aaKnown RBP8.88□□□□□ -0.99
ZNF253-203ENST00000589717 CEP164Q9UPV0 1460 aa8.88□□□□□ -0.99
ZNF253-203ENST00000589717 CCER1Q8TC90 406 aaPredicted RBP8.88□□□□□ -0.99
ZNF253-203ENST00000589717 CLSPNQ9HAW4 1339 aa8.87□□□□□ -0.99
ZNF253-203ENST00000589717 FAM9AQ8IZU1 332 aaPredicted RBP8.86□□□□□ -0.99
ZNF253-203ENST00000589717 SUPT16HQ9Y5B9 1047 aaKnown RBP8.86□□□□□ -0.99
ZNF253-203ENST00000589717 TSHZ2Q9NRE2 1034 aa8.85□□□□□ -0.99
ZNF253-203ENST00000589717 PRDM2Q13029 1718 aa8.84□□□□□ -0.99
ZNF253-203ENST00000589717 PRXQ9BXM0 1461 aa8.84□□□□□ -0.99
ZNF253-203ENST00000589717 RAPGEF2Q9Y4G8 1499 aa8.83□□□□□ -1
ZNF253-203ENST00000589717 KDM5BQ9UGL1 1544 aa8.82□□□□□ -1
ZNF253-203ENST00000589717 CFAP43Q8NDM7 1665 aa8.82□□□□□ -1
ZNF253-203ENST00000589717 MAP3K1Q13233 1512 aa8.8□□□□□ -1
ZNF253-203ENST00000589717 TTBK1Q5TCY1 1321 aaPredicted RBP8.77□□□□□ -1
ZNF253-203ENST00000589717 ANP32EQ9BTT0 268 aa8.76□□□□□ -1.01
ZNF253-203ENST00000589717 CSRNP3Q8WYN3 585 aa8.75□□□□□ -1.01
ZNF253-203ENST00000589717 LRRIQ1Q96JM4 1722 aa8.74□□□□□ -1.01
ZNF253-203ENST00000589717 WDR97A6NE52 1622 aa8.73□□□□□ -1.01
ZNF253-203ENST00000589717 POLR1AO95602 1720 aaPredicted RBP8.72□□□□□ -1.01
ZNF253-203ENST00000589717 BCL11AQ9H165 835 aa8.72□□□□□ -1.01
ZNF253-203ENST00000589717 TIAM1Q13009 1591 aa8.71□□□□□ -1.02
ZNF253-203ENST00000589717 ARHGAP35Q9NRY4 1499 aa8.69□□□□□ -1.02
ZNF253-203ENST00000589717 CUX1P39880 1505 aa8.69□□□□□ -1.02
ZNF253-203ENST00000589717 ATAD2BQ9ULI0 1458 aa8.67□□□□□ -1.02
ZNF253-203ENST00000589717 MSH5O43196 834 aa8.66□□□□□ -1.02
ZNF253-203ENST00000589717 ABCA5Q8WWZ7 1642 aa8.66□□□□□ -1.02
ZNF253-203ENST00000589717 NCAPD3P42695 1498 aa8.64□□□□□ -1.03
ZNF253-203ENST00000589717 PPP1R15AO75807 674 aaPredicted RBP8.63□□□□□ -1.03
ZNF253-203ENST00000589717 KCNH8Q96L42 1107 aa8.63□□□□□ -1.03
ZNF253-203ENST00000589717 HMGXB3Q12766 1538 aa8.62□□□□□ -1.03
ZNF253-203ENST00000589717 DENND4BO75064 1496 aaPredicted RBP8.62□□□□□ -1.03
ZNF253-203ENST00000589717 EHMT2Q96KQ7 1210 aa8.62□□□□□ -1.03
ZNF253-203ENST00000589717 YTHDC1Q96MU7 727 aaKnown RBP8.62□□□□□ -1.03
ZNF253-203ENST00000589717 PCF11O94913 1555 aaKnown RBP8.59□□□□□ -1.03
ZNF253-203ENST00000589717 KANK4Q5T7N3 995 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms