RNA–Protein interactions for RNA: ENST00000589543.5

ROGDI-211, Transcript of rogdi homolog, humanhuman

TSL 5

Gene ROGDI, Length 713 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROGDI-211ENST00000589543 NISCHQ9Y2I1 1504 aa40.38■■■■■ 4.06
ROGDI-211ENST00000589543 CCDC180Q9P1Z9 1646 aa36.03■■■■□ 3.36
ROGDI-211ENST00000589543 ABCC9O60706 1549 aa35.29■■■■□ 3.24
ROGDI-211ENST00000589543 RB1CC1Q8TDY2 1594 aa34.03■■■■□ 3.04
ROGDI-211ENST00000589543 NACADO15069 1562 aa33.96■■■■□ 3.03
ROGDI-211ENST00000589543 DCAF8L2P0C7V8 631 aa33.88■■■■□ 3.01
ROGDI-211ENST00000589543 MYO15BQ96JP2 1530 aa33.74■■■□□ 2.99
ROGDI-211ENST00000589543 ZCCHC6Q5VYS8 1495 aaKnown RBP33.56■■■□□ 2.96
ROGDI-211ENST00000589543 DCAF1Q9Y4B6 1507 aa33.49■■■□□ 2.95
ROGDI-211ENST00000589543 UNC13AQ9UPW8 1703 aa33.03■■■□□ 2.88
ROGDI-211ENST00000589543 PABPN1Q86U42 306 aaKnown RBP eCLIP32.95■■■□□ 2.87
ROGDI-211ENST00000589543 BICRAQ9NZM4 1560 aa32.79■■■□□ 2.84
ROGDI-211ENST00000589543 SHROOM4Q9ULL8 1493 aa32.74■■■□□ 2.83
ROGDI-211ENST00000589543 SCRIBQ14160 1630 aa32.72■■■□□ 2.83
ROGDI-211ENST00000589543 DNAJC5BQ9UF47 199 aa32.44■■■□□ 2.78
ROGDI-211ENST00000589543 EIF4G1Q04637 1599 aaKnown RBP32.04■■■□□ 2.72
ROGDI-211ENST00000589543 CC2D2AQ9P2K1 1620 aa31.93■■■□□ 2.7
ROGDI-211ENST00000589543 CECR2Q9BXF3 1484 aa31.8■■■□□ 2.68
ROGDI-211ENST00000589543 BAZ1AQ9NRL2 1556 aaPredicted RBP31.38■■■□□ 2.61
ROGDI-211ENST00000589543 SMARCA4P51532 1647 aa31.34■■■□□ 2.61
ROGDI-211ENST00000589543 NCAPD3P42695 1498 aa31.31■■■□□ 2.6
ROGDI-211ENST00000589543 SMARCA2P51531 1590 aa31.3■■■□□ 2.6
ROGDI-211ENST00000589543 ATAD2BQ9ULI0 1458 aa31.23■■■□□ 2.59
ROGDI-211ENST00000589543 HMGXB3Q12766 1538 aa31.13■■■□□ 2.57
ROGDI-211ENST00000589543 PEG3Q9GZU2 1588 aa31.09■■■□□ 2.57
ROGDI-211ENST00000589543 BAZ1BQ9UIG0 1483 aaKnown RBP31.02■■■□□ 2.56
ROGDI-211ENST00000589543 MROH2BQ7Z745 1585 aa31.02■■■□□ 2.56
ROGDI-211ENST00000589543 RSF1Q96T23 1441 aaPredicted RBP30.67■■■□□ 2.5
ROGDI-211ENST00000589543 WIZO95785 1651 aa30.67■■■□□ 2.5
ROGDI-211ENST00000589543 ERCC6Q03468 1493 aa30.57■■■□□ 2.48
ROGDI-211ENST00000589543 LAMC3Q9Y6N6 1575 aa30.53■■■□□ 2.48
ROGDI-211ENST00000589543 TOP2AP11388 1531 aaKnown RBP30.43■■■□□ 2.46
ROGDI-211ENST00000589543 NESP48681 1621 aa30.42■■■□□ 2.46
ROGDI-211ENST00000589543 CADPSQ9ULU8 1353 aa30.4■■■□□ 2.46
ROGDI-211ENST00000589543 PDS5BQ9NTI5 1447 aa30.39■■■□□ 2.46
ROGDI-211ENST00000589543 CUX2O14529 1486 aa30.33■■■□□ 2.45
ROGDI-211ENST00000589543 CFTRP13569 1480 aa30.14■■■□□ 2.42
ROGDI-211ENST00000589543 KIF21AQ7Z4S6 1674 aa30.09■■■□□ 2.41
ROGDI-211ENST00000589543 CCDC88BA6NC98 1476 aa30.06■■■□□ 2.4
ROGDI-211ENST00000589543 THOC2Q8NI27 1593 aaKnown RBP30.03■■■□□ 2.4
ROGDI-211ENST00000589543 CEP164Q9UPV0 1460 aa30.01■■■□□ 2.4
ROGDI-211ENST00000589543 FANCD2Q9BXW9 1451 aa30■■■□□ 2.39
ROGDI-211ENST00000589543 MRC2Q9UBG0 1479 aa29.99■■■□□ 2.39
ROGDI-211ENST00000589543 PRDM2Q13029 1718 aa29.88■■■□□ 2.37
ROGDI-211ENST00000589543 WDR62O43379 1518 aa29.86■■■□□ 2.37
ROGDI-211ENST00000589543 SUPT5HO00267 1087 aaKnown RBP29.81■■■□□ 2.36
ROGDI-211ENST00000589543 ABCC8Q09428 1581 aa29.67■■■□□ 2.34
ROGDI-211ENST00000589543 URB2Q14146 1524 aaKnown RBP29.61■■■□□ 2.33
ROGDI-211ENST00000589543 DNAJC5Q9H3Z4 198 aa29.56■■■□□ 2.32
ROGDI-211ENST00000589543 TOPBP1Q92547 1522 aa29.47■■■□□ 2.31
ROGDI-211ENST00000589543 DNMBPQ6XZF7 1577 aa29.46■■■□□ 2.31
ROGDI-211ENST00000589543 IFT140Q96RY7 1462 aa29.42■■■□□ 2.3
ROGDI-211ENST00000589543 POLA1P09884 1462 aaPredicted RBP29.2■■■□□ 2.26
ROGDI-211ENST00000589543 SOGA1O94964 1423 aa29.17■■■□□ 2.26
ROGDI-211ENST00000589543 CUX1P39880 1505 aa29.12■■■□□ 2.25
ROGDI-211ENST00000589543 ZNF608Q9ULD9 1512 aaPredicted RBP29.12■■■□□ 2.25
ROGDI-211ENST00000589543 TARBP1Q13395 1621 aaKnown RBP29.12■■■□□ 2.25
ROGDI-211ENST00000589543 OSCARQ8IYS5 282 aa29.11■■■□□ 2.25
ROGDI-211ENST00000589543 FGD5Q6ZNL6 1462 aa29.1■■■□□ 2.25
ROGDI-211ENST00000589543 WDR97A6NE52 1622 aa29.08■■■□□ 2.25
ROGDI-211ENST00000589543 EIF4G3O43432 1585 aaKnown RBP29.05■■■□□ 2.24
ROGDI-211ENST00000589543 RAD54L2Q9Y4B4 1467 aa29.02■■■□□ 2.24
ROGDI-211ENST00000589543 AQRO60306 1485 aaKnown RBP eCLIP29■■■□□ 2.231e-6■■■■■ 31.5
ROGDI-211ENST00000589543 WRNQ14191 1432 aaPredicted RBP eCLIP29■■■□□ 2.23
ROGDI-211ENST00000589543 TDRD9Q8NDG6 1382 aaKnown RBP28.94■■■□□ 2.22
ROGDI-211ENST00000589543 TOP2BQ02880 1626 aa28.91■■■□□ 2.22
ROGDI-211ENST00000589543 BIVM-ERCC5R4GMW8 1640 aa28.89■■■□□ 2.22
ROGDI-211ENST00000589543 ABCA10Q8WWZ4 1543 aa28.87■■■□□ 2.21
ROGDI-211ENST00000589543 GRIN2BQ13224 1484 aa28.85■■■□□ 2.21
ROGDI-211ENST00000589543 GAPVD1Q14C86 1478 aa28.81■■■□□ 2.2
ROGDI-211ENST00000589543 MAGI1Q96QZ7 1491 aaPredicted RBP28.81■■■□□ 2.2
ROGDI-211ENST00000589543 FBLN2P98095 1184 aa28.81■■■□□ 2.2
ROGDI-211ENST00000589543 SYNJ1O43426 1573 aa28.79■■■□□ 2.2
ROGDI-211ENST00000589543 CHMP7Q8WUX9 453 aaPredicted RBP28.76■■■□□ 2.19
ROGDI-211ENST00000589543 SNAPC4Q5SXM2 1469 aa28.74■■■□□ 2.19
ROGDI-211ENST00000589543 ABCA5Q8WWZ7 1642 aa28.69■■■□□ 2.18
ROGDI-211ENST00000589543 CHD1O14646 1710 aa28.69■■■□□ 2.18
ROGDI-211ENST00000589543 SYNJ2O15056 1496 aa28.67■■■□□ 2.18
ROGDI-211ENST00000589543 PBRM1Q86U86 1689 aa28.67■■■□□ 2.18
ROGDI-211ENST00000589543 ERICH3Q5RHP9 1530 aa28.57■■■□□ 2.16
ROGDI-211ENST00000589543 FHAD1B1AJZ9 1412 aa28.51■■■□□ 2.15
ROGDI-211ENST00000589543 KIF27Q86VH2 1401 aa28.47■■■□□ 2.15
ROGDI-211ENST00000589543 TRIM41Q8WV44 630 aa28.47■■■□□ 2.15
ROGDI-211ENST00000589543 ARHGEF11O15085 1522 aa28.46■■■□□ 2.15
ROGDI-211ENST00000589543 RIMBP3CA6NJZ7 1639 aa28.45■■■□□ 2.14
ROGDI-211ENST00000589543 RIMBP3BA6NNM3 1639 aa28.45■■■□□ 2.14
ROGDI-211ENST00000589543 RIMBP3Q9UFD9 1639 aa28.45■■■□□ 2.14
ROGDI-211ENST00000589543 ADAMTS12P58397 1594 aa28.43■■■□□ 2.14
ROGDI-211ENST00000589543 GRIN2AQ12879 1464 aa28.42■■■□□ 2.14
ROGDI-211ENST00000589543 CLASP1Q7Z460 1538 aa28.41■■■□□ 2.14
ROGDI-211ENST00000589543 NUP160Q12769 1436 aa28.3■■■□□ 2.12
ROGDI-211ENST00000589543 IGF1RP08069 1367 aa28.29■■■□□ 2.12
ROGDI-211ENST00000589543 CYB5RLQ6IPT4 315 aa28.28■■■□□ 2.12
ROGDI-211ENST00000589543 CUL7Q14999 1698 aa28.27■■■□□ 2.12
ROGDI-211ENST00000589543 CEP170Q5SW79 1584 aa28.2■■■□□ 2.11
ROGDI-211ENST00000589543 ARAP1Q96P48 1450 aa28.17■■■□□ 2.1
ROGDI-211ENST00000589543 CARMIL1Q5VZK9 1371 aa28.17■■■□□ 2.1
ROGDI-211ENST00000589543 JPH4Q96JJ6 628 aa28.1■■■□□ 2.09
ROGDI-211ENST00000589543 SHROOM2Q13796 1616 aa28.07■■■□□ 2.08
ROGDI-211ENST00000589543 KIAA0586Q9BVV6 1533 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms