RNA–Protein interactions for RNA: ENST00000589508.1

LINC00663-205, long intergenic non-protein coding RNA 663, humanhuman

TSL 3 BASIC

Gene LINC00663, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00663-205ENST00000589508 NISCHQ9Y2I1 1504 aa21.27■■□□□ 1
LINC00663-205ENST00000589508 ABCC9O60706 1549 aa19.46■□□□□ 0.71
LINC00663-205ENST00000589508 CCDC180Q9P1Z9 1646 aa19.09■□□□□ 0.65
LINC00663-205ENST00000589508 DNAJC5BQ9UF47 199 aa18.62■□□□□ 0.57
LINC00663-205ENST00000589508 RB1CC1Q8TDY2 1594 aa18.36■□□□□ 0.53
LINC00663-205ENST00000589508 NACADO15069 1562 aa18.19■□□□□ 0.5
LINC00663-205ENST00000589508 PABPN1Q86U42 306 aaKnown RBP eCLIP18.16■□□□□ 0.5
LINC00663-205ENST00000589508 DCAF8L2P0C7V8 631 aa18.15■□□□□ 0.5
LINC00663-205ENST00000589508 MYO15BQ96JP2 1530 aa17.88■□□□□ 0.45
LINC00663-205ENST00000589508 BICRAQ9NZM4 1560 aa17.87■□□□□ 0.45
LINC00663-205ENST00000589508 UNC13AQ9UPW8 1703 aa17.85■□□□□ 0.45
LINC00663-205ENST00000589508 SHROOM4Q9ULL8 1493 aa17.58■□□□□ 0.41
LINC00663-205ENST00000589508 DCAF1Q9Y4B6 1507 aa17.56■□□□□ 0.4
LINC00663-205ENST00000589508 CECR2Q9BXF3 1484 aa17.56■□□□□ 0.4
LINC00663-205ENST00000589508 ZCCHC6Q5VYS8 1495 aaKnown RBP17.54■□□□□ 0.4
LINC00663-205ENST00000589508 CC2D2AQ9P2K1 1620 aa17.52■□□□□ 0.4
LINC00663-205ENST00000589508 EIF4G1Q04637 1599 aaKnown RBP17.43■□□□□ 0.38
LINC00663-205ENST00000589508 SCRIBQ14160 1630 aa17.4■□□□□ 0.38
LINC00663-205ENST00000589508 DNAJC5Q9H3Z4 198 aa17.28■□□□□ 0.36
LINC00663-205ENST00000589508 CUX2O14529 1486 aa16.87■□□□□ 0.29
LINC00663-205ENST00000589508 NCAPD3P42695 1498 aa16.87■□□□□ 0.29
LINC00663-205ENST00000589508 ERCC6Q03468 1493 aa16.79■□□□□ 0.28
LINC00663-205ENST00000589508 ATAD2BQ9ULI0 1458 aa16.75■□□□□ 0.27
LINC00663-205ENST00000589508 NESP48681 1621 aa16.64■□□□□ 0.25
LINC00663-205ENST00000589508 SMARCA2P51531 1590 aa16.64■□□□□ 0.25
LINC00663-205ENST00000589508 HMGXB3Q12766 1538 aa16.63■□□□□ 0.25
LINC00663-205ENST00000589508 SMARCA4P51532 1647 aa16.59■□□□□ 0.25
LINC00663-205ENST00000589508 BAZ1BQ9UIG0 1483 aaKnown RBP16.54■□□□□ 0.24
LINC00663-205ENST00000589508 BAZ1AQ9NRL2 1556 aaPredicted RBP16.49■□□□□ 0.23
LINC00663-205ENST00000589508 PEG3Q9GZU2 1588 aa16.47■□□□□ 0.23
LINC00663-205ENST00000589508 THOC2Q8NI27 1593 aaKnown RBP16.45■□□□□ 0.22
LINC00663-205ENST00000589508 LAMC3Q9Y6N6 1575 aa16.44■□□□□ 0.22
LINC00663-205ENST00000589508 PDS5BQ9NTI5 1447 aa16.43■□□□□ 0.22
LINC00663-205ENST00000589508 MROH2BQ7Z745 1585 aa16.38■□□□□ 0.21
LINC00663-205ENST00000589508 TRIM41Q8WV44 630 aa16.35■□□□□ 0.21
LINC00663-205ENST00000589508 CADPSQ9ULU8 1353 aa16.35■□□□□ 0.21
LINC00663-205ENST00000589508 KIF21AQ7Z4S6 1674 aa16.31■□□□□ 0.2
LINC00663-205ENST00000589508 MRC2Q9UBG0 1479 aa16.25■□□□□ 0.19
LINC00663-205ENST00000589508 WDR62O43379 1518 aa16.2■□□□□ 0.18
LINC00663-205ENST00000589508 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
LINC00663-205ENST00000589508 WIZO95785 1651 aa16.12■□□□□ 0.17
LINC00663-205ENST00000589508 CEP164Q9UPV0 1460 aa16.12■□□□□ 0.17
LINC00663-205ENST00000589508 FANCD2Q9BXW9 1451 aa16.11■□□□□ 0.17
LINC00663-205ENST00000589508 CFTRP13569 1480 aa16.09■□□□□ 0.17
LINC00663-205ENST00000589508 AEBP2Q6ZN18 517 aaPredicted RBP16.07■□□□□ 0.16
LINC00663-205ENST00000589508 RSF1Q96T23 1441 aaPredicted RBP16■□□□□ 0.15
LINC00663-205ENST00000589508 URB2Q14146 1524 aaKnown RBP15.99■□□□□ 0.15
LINC00663-205ENST00000589508 TOP2AP11388 1531 aaKnown RBP15.91■□□□□ 0.14
LINC00663-205ENST00000589508 ZNF608Q9ULD9 1512 aaPredicted RBP15.85■□□□□ 0.13
LINC00663-205ENST00000589508 IFT140Q96RY7 1462 aa15.84■□□□□ 0.13
LINC00663-205ENST00000589508 RIMBP3CA6NJZ7 1639 aa15.83■□□□□ 0.13
LINC00663-205ENST00000589508 RIMBP3BA6NNM3 1639 aa15.83■□□□□ 0.13
LINC00663-205ENST00000589508 RIMBP3Q9UFD9 1639 aa15.83■□□□□ 0.13
LINC00663-205ENST00000589508 CCDC88BA6NC98 1476 aa15.8■□□□□ 0.12
LINC00663-205ENST00000589508 ARHGEF11O15085 1522 aa15.78■□□□□ 0.12
LINC00663-205ENST00000589508 CYB5RLQ6IPT4 315 aa15.78■□□□□ 0.12
LINC00663-205ENST00000589508 TOPBP1Q92547 1522 aa15.77■□□□□ 0.11
LINC00663-205ENST00000589508 ABCC8Q09428 1581 aa15.73■□□□□ 0.11
LINC00663-205ENST00000589508 AQRO60306 1485 aaKnown RBP eCLIP15.71■□□□□ 0.1
LINC00663-205ENST00000589508 PRDM2Q13029 1718 aa15.69■□□□□ 0.1
LINC00663-205ENST00000589508 TRHP20396 242 aaPredicted RBP15.67■□□□□ 0.1
LINC00663-205ENST00000589508 FBLN2P98095 1184 aa15.66■□□□□ 0.1
LINC00663-205ENST00000589508 EIF4G3O43432 1585 aaKnown RBP15.66■□□□□ 0.1
LINC00663-205ENST00000589508 DNMBPQ6XZF7 1577 aa15.65■□□□□ 0.1
LINC00663-205ENST00000589508 TARBP1Q13395 1621 aaKnown RBP15.63■□□□□ 0.09
LINC00663-205ENST00000589508 ARAP1Q96P48 1450 aa15.63■□□□□ 0.09
LINC00663-205ENST00000589508 POLA1P09884 1462 aaPredicted RBP15.59■□□□□ 0.09
LINC00663-205ENST00000589508 TDRD9Q8NDG6 1382 aaKnown RBP15.58■□□□□ 0.08
LINC00663-205ENST00000589508 SOGA1O94964 1423 aa15.57■□□□□ 0.08
LINC00663-205ENST00000589508 RAD54L2Q9Y4B4 1467 aa15.57■□□□□ 0.08
LINC00663-205ENST00000589508 CHD1O14646 1710 aa15.56■□□□□ 0.08
LINC00663-205ENST00000589508 CHMP7Q8WUX9 453 aaPredicted RBP15.52■□□□□ 0.08
LINC00663-205ENST00000589508 SNAPC4Q5SXM2 1469 aa15.47■□□□□ 0.07
LINC00663-205ENST00000589508 CLASP1Q7Z460 1538 aa15.46■□□□□ 0.07
LINC00663-205ENST00000589508 FGD5Q6ZNL6 1462 aa15.45■□□□□ 0.06
LINC00663-205ENST00000589508 MAGI1Q96QZ7 1491 aaPredicted RBP15.43■□□□□ 0.06
LINC00663-205ENST00000589508 GRIN2BQ13224 1484 aa15.42■□□□□ 0.06
LINC00663-205ENST00000589508 WDR97A6NE52 1622 aa15.42■□□□□ 0.06
LINC00663-205ENST00000589508 CUX1P39880 1505 aa15.4■□□□□ 0.06
LINC00663-205ENST00000589508 SYNJ1O43426 1573 aa15.4■□□□□ 0.06
LINC00663-205ENST00000589508 SYNJ2O15056 1496 aa15.4■□□□□ 0.06
LINC00663-205ENST00000589508 GAPVD1Q14C86 1478 aa15.34■□□□□ 0.05
LINC00663-205ENST00000589508 ABCA10Q8WWZ4 1543 aa15.27■□□□□ 0.04
LINC00663-205ENST00000589508 GRIN2AQ12879 1464 aa15.21■□□□□ 0.03
LINC00663-205ENST00000589508 ERCC6L2Q5T890 1561 aa15.21■□□□□ 0.03
LINC00663-205ENST00000589508 PBRM1Q86U86 1689 aa15.21■□□□□ 0.03
LINC00663-205ENST00000589508 ABCA5Q8WWZ7 1642 aa15.21■□□□□ 0.02
LINC00663-205ENST00000589508 NUP160Q12769 1436 aa15.2■□□□□ 0.02
LINC00663-205ENST00000589508 WRNQ14191 1432 aaPredicted RBP eCLIP15.18■□□□□ 0.02
LINC00663-205ENST00000589508 CEP170Q5SW79 1584 aa15.15■□□□□ 0.02
LINC00663-205ENST00000589508 FHAD1B1AJZ9 1412 aa15.14■□□□□ 0.01
LINC00663-205ENST00000589508 JPH4Q96JJ6 628 aa15.12■□□□□ 0.01
LINC00663-205ENST00000589508 ADAMTS12P58397 1594 aa15.11■□□□□ 0.01
LINC00663-205ENST00000589508 SUPT5HO00267 1087 aaKnown RBP15.1■□□□□ 0.01
LINC00663-205ENST00000589508 SHROOM2Q13796 1616 aa15.1■□□□□ 0.01
LINC00663-205ENST00000589508 PRG4Q92954 1404 aaPredicted RBP15.09■□□□□ 0.01
LINC00663-205ENST00000589508 ERICH3Q5RHP9 1530 aa15.06■□□□□ 0
LINC00663-205ENST00000589508 TOP2BQ02880 1626 aa15.05■□□□□ -0
LINC00663-205ENST00000589508 FAM69CQ0P6D2 419 aa15.04■□□□□ -0
LINC00663-205ENST00000589508 BIVM-ERCC5R4GMW8 1640 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms