RNA–Protein interactions for RNA: ENST00000589440.1

AC009271.1-201, humanhuman

TSL 2 BASIC

Gene AC009271.1, Length 518 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009271.1-201ENST00000589440 NISCHQ9Y2I1 1504 aa27.3■■□□□ 1.96
AC009271.1-201ENST00000589440 CCDC180Q9P1Z9 1646 aa24.2■■□□□ 1.46
AC009271.1-201ENST00000589440 ABCC9O60706 1549 aa23.33■■□□□ 1.32
AC009271.1-201ENST00000589440 ZCCHC6Q5VYS8 1495 aaKnown RBP22.82■■□□□ 1.24
AC009271.1-201ENST00000589440 DCAF8L2P0C7V8 631 aa22.67■■□□□ 1.22
AC009271.1-201ENST00000589440 NACADO15069 1562 aa22.63■■□□□ 1.21
AC009271.1-201ENST00000589440 RB1CC1Q8TDY2 1594 aa22.6■■□□□ 1.21
AC009271.1-201ENST00000589440 DCAF1Q9Y4B6 1507 aa22.6■■□□□ 1.21
AC009271.1-201ENST00000589440 MYO15BQ96JP2 1530 aa22.57■■□□□ 1.2
AC009271.1-201ENST00000589440 SCRIBQ14160 1630 aa22.11■■□□□ 1.13
AC009271.1-201ENST00000589440 UNC13AQ9UPW8 1703 aa22.11■■□□□ 1.13
AC009271.1-201ENST00000589440 BICRAQ9NZM4 1560 aa21.86■■□□□ 1.09
AC009271.1-201ENST00000589440 PABPN1Q86U42 306 aaKnown RBP eCLIP21.8■■□□□ 1.08
AC009271.1-201ENST00000589440 SHROOM4Q9ULL8 1493 aa21.77■■□□□ 1.08
AC009271.1-201ENST00000589440 EIF4G1Q04637 1599 aaKnown RBP21.28■■□□□ 1
AC009271.1-201ENST00000589440 DNAJC5BQ9UF47 199 aa21.28■■□□□ 1
AC009271.1-201ENST00000589440 CECR2Q9BXF3 1484 aa21.2■□□□□ 0.98
AC009271.1-201ENST00000589440 BAZ1AQ9NRL2 1556 aaPredicted RBP21.17■□□□□ 0.98
AC009271.1-201ENST00000589440 SMARCA4P51532 1647 aa21.15■□□□□ 0.98
AC009271.1-201ENST00000589440 CC2D2AQ9P2K1 1620 aa21.12■□□□□ 0.97
AC009271.1-201ENST00000589440 MROH2BQ7Z745 1585 aa21.04■□□□□ 0.96
AC009271.1-201ENST00000589440 SMARCA2P51531 1590 aa20.95■□□□□ 0.94
AC009271.1-201ENST00000589440 PEG3Q9GZU2 1588 aa20.91■□□□□ 0.94
AC009271.1-201ENST00000589440 ATAD2BQ9ULI0 1458 aa20.9■□□□□ 0.94
AC009271.1-201ENST00000589440 RSF1Q96T23 1441 aaPredicted RBP20.89■□□□□ 0.94
AC009271.1-201ENST00000589440 WIZO95785 1651 aa20.86■□□□□ 0.93
AC009271.1-201ENST00000589440 NCAPD3P42695 1498 aa20.83■□□□□ 0.93
AC009271.1-201ENST00000589440 HMGXB3Q12766 1538 aa20.82■□□□□ 0.92
AC009271.1-201ENST00000589440 BAZ1BQ9UIG0 1483 aaKnown RBP20.8■□□□□ 0.92
AC009271.1-201ENST00000589440 TOP2AP11388 1531 aaKnown RBP20.67■□□□□ 0.9
AC009271.1-201ENST00000589440 SUPT5HO00267 1087 aaKnown RBP20.62■□□□□ 0.89
AC009271.1-201ENST00000589440 CCDC88BA6NC98 1476 aa20.37■□□□□ 0.85
AC009271.1-201ENST00000589440 LAMC3Q9Y6N6 1575 aa20.29■□□□□ 0.84
AC009271.1-201ENST00000589440 NESP48681 1621 aa20.26■□□□□ 0.83
AC009271.1-201ENST00000589440 CADPSQ9ULU8 1353 aa20.24■□□□□ 0.83
AC009271.1-201ENST00000589440 CFTRP13569 1480 aa20.2■□□□□ 0.82
AC009271.1-201ENST00000589440 PRDM2Q13029 1718 aa20.19■□□□□ 0.82
AC009271.1-201ENST00000589440 ERCC6Q03468 1493 aa20.12■□□□□ 0.81
AC009271.1-201ENST00000589440 PDS5BQ9NTI5 1447 aa20.12■□□□□ 0.81
AC009271.1-201ENST00000589440 KIF21AQ7Z4S6 1674 aa20.09■□□□□ 0.81
AC009271.1-201ENST00000589440 FANCD2Q9BXW9 1451 aa20.05■□□□□ 0.8
AC009271.1-201ENST00000589440 CEP164Q9UPV0 1460 aa20.03■□□□□ 0.8
AC009271.1-201ENST00000589440 THOC2Q8NI27 1593 aaKnown RBP19.93■□□□□ 0.78
AC009271.1-201ENST00000589440 MRC2Q9UBG0 1479 aa19.92■□□□□ 0.78
AC009271.1-201ENST00000589440 WDR62O43379 1518 aa19.84■□□□□ 0.77
AC009271.1-201ENST00000589440 URB2Q14146 1524 aaKnown RBP19.82■□□□□ 0.76
AC009271.1-201ENST00000589440 ABCC8Q09428 1581 aa19.79■□□□□ 0.76
AC009271.1-201ENST00000589440 DNMBPQ6XZF7 1577 aa19.79■□□□□ 0.76
AC009271.1-201ENST00000589440 TOPBP1Q92547 1522 aa19.76■□□□□ 0.75
AC009271.1-201ENST00000589440 CUX2O14529 1486 aa19.76■□□□□ 0.75
AC009271.1-201ENST00000589440 CUX1P39880 1505 aa19.73■□□□□ 0.75
AC009271.1-201ENST00000589440 WRNQ14191 1432 aaPredicted RBP eCLIP19.73■□□□□ 0.75
AC009271.1-201ENST00000589440 SYNJ1O43426 1573 aa19.68■□□□□ 0.74
AC009271.1-201ENST00000589440 BIVM-ERCC5R4GMW8 1640 aa19.68■□□□□ 0.74
AC009271.1-201ENST00000589440 TOP2BQ02880 1626 aa19.67■□□□□ 0.74
AC009271.1-201ENST00000589440 FGD5Q6ZNL6 1462 aa19.63■□□□□ 0.73
AC009271.1-201ENST00000589440 POLA1P09884 1462 aaPredicted RBP19.61■□□□□ 0.73
AC009271.1-201ENST00000589440 IFT140Q96RY7 1462 aa19.57■□□□□ 0.72
AC009271.1-201ENST00000589440 TARBP1Q13395 1621 aaKnown RBP19.53■□□□□ 0.72
AC009271.1-201ENST00000589440 SOGA1O94964 1423 aa19.52■□□□□ 0.72
AC009271.1-201ENST00000589440 RAD54L2Q9Y4B4 1467 aa19.52■□□□□ 0.72
AC009271.1-201ENST00000589440 WDR97A6NE52 1622 aa19.49■□□□□ 0.71
AC009271.1-201ENST00000589440 TRIM41Q8WV44 630 aa19.46■□□□□ 0.71
AC009271.1-201ENST00000589440 DNAJC5Q9H3Z4 198 aa19.46■□□□□ 0.71
AC009271.1-201ENST00000589440 ABCA10Q8WWZ4 1543 aa19.44■□□□□ 0.7
AC009271.1-201ENST00000589440 EIF4G3O43432 1585 aaKnown RBP19.44■□□□□ 0.7
AC009271.1-201ENST00000589440 ZNF608Q9ULD9 1512 aaPredicted RBP19.43■□□□□ 0.7
AC009271.1-201ENST00000589440 CHIC1Q5VXU3 224 aa19.38■□□□□ 0.69
AC009271.1-201ENST00000589440 ABCA5Q8WWZ7 1642 aa19.37■□□□□ 0.69
AC009271.1-201ENST00000589440 TDRD9Q8NDG6 1382 aaKnown RBP19.36■□□□□ 0.69
AC009271.1-201ENST00000589440 AQRO60306 1485 aaKnown RBP eCLIP19.35■□□□□ 0.69
AC009271.1-201ENST00000589440 PBRM1Q86U86 1689 aa19.33■□□□□ 0.69
AC009271.1-201ENST00000589440 GAPVD1Q14C86 1478 aa19.33■□□□□ 0.68
AC009271.1-201ENST00000589440 KIF27Q86VH2 1401 aa19.3■□□□□ 0.68
AC009271.1-201ENST00000589440 GRIN2BQ13224 1484 aa19.28■□□□□ 0.68
AC009271.1-201ENST00000589440 SNAPC4Q5SXM2 1469 aa19.23■□□□□ 0.67
AC009271.1-201ENST00000589440 ERICH3Q5RHP9 1530 aa19.23■□□□□ 0.67
AC009271.1-201ENST00000589440 MAGI1Q96QZ7 1491 aaPredicted RBP19.22■□□□□ 0.67
AC009271.1-201ENST00000589440 ADAMTS12P58397 1594 aa19.18■□□□□ 0.66
AC009271.1-201ENST00000589440 RUSC2Q8N2Y8 1516 aa19.17■□□□□ 0.66
AC009271.1-201ENST00000589440 CUL7Q14999 1698 aa19.16■□□□□ 0.66
AC009271.1-201ENST00000589440 EEA1Q15075 1411 aa19.15■□□□□ 0.66
AC009271.1-201ENST00000589440 CHD1O14646 1710 aa19.14■□□□□ 0.65
AC009271.1-201ENST00000589440 SYNJ2O15056 1496 aa19.12■□□□□ 0.65
AC009271.1-201ENST00000589440 FHAD1B1AJZ9 1412 aa19.11■□□□□ 0.65
AC009271.1-201ENST00000589440 IGF1RP08069 1367 aa19.11■□□□□ 0.65
AC009271.1-201ENST00000589440 FBLN2P98095 1184 aa19.09■□□□□ 0.65
AC009271.1-201ENST00000589440 CHMP7Q8WUX9 453 aaPredicted RBP19.07■□□□□ 0.64
AC009271.1-201ENST00000589440 FAM9AQ8IZU1 332 aaPredicted RBP19.06■□□□□ 0.64
AC009271.1-201ENST00000589440 GRIN2AQ12879 1464 aa19.04■□□□□ 0.64
AC009271.1-201ENST00000589440 CARMIL1Q5VZK9 1371 aa19.04■□□□□ 0.64
AC009271.1-201ENST00000589440 CSRNP3Q8WYN3 585 aa19.01■□□□□ 0.63
AC009271.1-201ENST00000589440 RAPGEF2Q9Y4G8 1499 aa18.99■□□□□ 0.63
AC009271.1-201ENST00000589440 PRXQ9BXM0 1461 aa18.97■□□□□ 0.63
AC009271.1-201ENST00000589440 OSCARQ8IYS5 282 aa18.95■□□□□ 0.62
AC009271.1-201ENST00000589440 CEP170Q5SW79 1584 aa18.94■□□□□ 0.62
AC009271.1-201ENST00000589440 KIF21BO75037 1637 aa18.94■□□□□ 0.62
AC009271.1-201ENST00000589440 NUP160Q12769 1436 aa18.91■□□□□ 0.62
AC009271.1-201ENST00000589440 CLASP1Q7Z460 1538 aa18.9■□□□□ 0.62
AC009271.1-201ENST00000589440 CTTNBP2Q8WZ74 1663 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms