RNA–Protein interactions for RNA: ENST00000589369.2

AP3D1-207, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 3

Gene AP3D1, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-207ENST00000589369 NISCHQ9Y2I1 1504 aa42.71■■■■■ 4.43
AP3D1-207ENST00000589369 CCDC180Q9P1Z9 1646 aa38.23■■■■□ 3.71
AP3D1-207ENST00000589369 ABCC9O60706 1549 aa38.14■■■■□ 3.7
AP3D1-207ENST00000589369 RB1CC1Q8TDY2 1594 aa36.32■■■■□ 3.41
AP3D1-207ENST00000589369 NACADO15069 1562 aa36.11■■■■□ 3.37
AP3D1-207ENST00000589369 DCAF8L2P0C7V8 631 aa35.94■■■■□ 3.34
AP3D1-207ENST00000589369 DNAJC5BQ9UF47 199 aa35.7■■■■□ 3.31
AP3D1-207ENST00000589369 MYO15BQ96JP2 1530 aa35.67■■■■□ 3.3
AP3D1-207ENST00000589369 PABPN1Q86U42 306 aaKnown RBP eCLIP35.54■■■■□ 3.282e-10■■■■□ 20.6
AP3D1-207ENST00000589369 UNC13AQ9UPW8 1703 aa35.54■■■■□ 3.28
AP3D1-207ENST00000589369 ZCCHC6Q5VYS8 1495 aaKnown RBP35.43■■■■□ 3.26
AP3D1-207ENST00000589369 BICRAQ9NZM4 1560 aa35.32■■■■□ 3.24
AP3D1-207ENST00000589369 DCAF1Q9Y4B6 1507 aa35.27■■■■□ 3.24
AP3D1-207ENST00000589369 SCRIBQ14160 1630 aa34.88■■■■□ 3.17
AP3D1-207ENST00000589369 SHROOM4Q9ULL8 1493 aa34.79■■■■□ 3.16
AP3D1-207ENST00000589369 CC2D2AQ9P2K1 1620 aa34.45■■■■□ 3.11
AP3D1-207ENST00000589369 EIF4G1Q04637 1599 aaKnown RBP34.41■■■■□ 3.1
AP3D1-207ENST00000589369 CECR2Q9BXF3 1484 aa34.33■■■■□ 3.09
AP3D1-207ENST00000589369 NCAPD3P42695 1498 aa33.36■■■□□ 2.93
AP3D1-207ENST00000589369 ATAD2BQ9ULI0 1458 aa33.29■■■□□ 2.92
AP3D1-207ENST00000589369 SMARCA4P51532 1647 aa33.28■■■□□ 2.92
AP3D1-207ENST00000589369 SMARCA2P51531 1590 aa33.17■■■□□ 2.9
AP3D1-207ENST00000589369 HMGXB3Q12766 1538 aa33.12■■■□□ 2.89
AP3D1-207ENST00000589369 BAZ1AQ9NRL2 1556 aaPredicted RBP33.11■■■□□ 2.89
AP3D1-207ENST00000589369 PEG3Q9GZU2 1588 aa32.96■■■□□ 2.87
AP3D1-207ENST00000589369 BAZ1BQ9UIG0 1483 aaKnown RBP32.94■■■□□ 2.86
AP3D1-207ENST00000589369 MROH2BQ7Z745 1585 aa32.93■■■□□ 2.86
AP3D1-207ENST00000589369 ERCC6Q03468 1493 aa32.87■■■□□ 2.85
AP3D1-207ENST00000589369 NESP48681 1621 aa32.82■■■□□ 2.84
AP3D1-207ENST00000589369 CUX2O14529 1486 aa32.78■■■□□ 2.84
AP3D1-207ENST00000589369 DNAJC5Q9H3Z4 198 aa32.62■■■□□ 2.81
AP3D1-207ENST00000589369 LAMC3Q9Y6N6 1575 aa32.56■■■□□ 2.8
AP3D1-207ENST00000589369 WIZO95785 1651 aa32.53■■■□□ 2.8
AP3D1-207ENST00000589369 THOC2Q8NI27 1593 aaKnown RBP32.45■■■□□ 2.78
AP3D1-207ENST00000589369 KIF21AQ7Z4S6 1674 aa32.37■■■□□ 2.77
AP3D1-207ENST00000589369 PDS5BQ9NTI5 1447 aa32.35■■■□□ 2.77
AP3D1-207ENST00000589369 CADPSQ9ULU8 1353 aa32.34■■■□□ 2.77
AP3D1-207ENST00000589369 RSF1Q96T23 1441 aaPredicted RBP32.29■■■□□ 2.76
AP3D1-207ENST00000589369 TOP2AP11388 1531 aaKnown RBP32.11■■■□□ 2.73
AP3D1-207ENST00000589369 MRC2Q9UBG0 1479 aa32.1■■■□□ 2.73
AP3D1-207ENST00000589369 WDR62O43379 1518 aa32.03■■■□□ 2.72
AP3D1-207ENST00000589369 CFTRP13569 1480 aa32.02■■■□□ 2.72
AP3D1-207ENST00000589369 CEP164Q9UPV0 1460 aa31.99■■■□□ 2.71
AP3D1-207ENST00000589369 FANCD2Q9BXW9 1451 aa31.98■■■□□ 2.71
AP3D1-207ENST00000589369 CCDC88BA6NC98 1476 aa31.77■■■□□ 2.68
AP3D1-207ENST00000589369 URB2Q14146 1524 aaKnown RBP31.74■■■□□ 2.67
AP3D1-207ENST00000589369 PRDM2Q13029 1718 aa31.67■■■□□ 2.66
AP3D1-207ENST00000589369 TOPBP1Q92547 1522 aa31.4■■■□□ 2.62
AP3D1-207ENST00000589369 IFT140Q96RY7 1462 aa31.35■■■□□ 2.61
AP3D1-207ENST00000589369 ZNF608Q9ULD9 1512 aaPredicted RBP31.33■■■□□ 2.61
AP3D1-207ENST00000589369 OSCARQ8IYS5 282 aa31.29■■■□□ 2.6
AP3D1-207ENST00000589369 ABCC8Q09428 1581 aa31.29■■■□□ 2.6
AP3D1-207ENST00000589369 DNMBPQ6XZF7 1577 aa31.29■■■□□ 2.6
AP3D1-207ENST00000589369 TRIM41Q8WV44 630 aa31.24■■■□□ 2.59
AP3D1-207ENST00000589369 EIF4G3O43432 1585 aaKnown RBP31.13■■■□□ 2.57
AP3D1-207ENST00000589369 TARBP1Q13395 1621 aaKnown RBP31.13■■■□□ 2.57
AP3D1-207ENST00000589369 POLA1P09884 1462 aaPredicted RBP31.09■■■□□ 2.57
AP3D1-207ENST00000589369 AQRO60306 1485 aaKnown RBP eCLIP31.05■■■□□ 2.562e-13■■■■■ 27.3
AP3D1-207ENST00000589369 RAD54L2Q9Y4B4 1467 aa30.99■■■□□ 2.55
AP3D1-207ENST00000589369 SOGA1O94964 1423 aa30.93■■■□□ 2.54
AP3D1-207ENST00000589369 SUPT5HO00267 1087 aaKnown RBP30.93■■■□□ 2.54
AP3D1-207ENST00000589369 CUX1P39880 1505 aa30.93■■■□□ 2.54
AP3D1-207ENST00000589369 RIMBP3CA6NJZ7 1639 aa30.91■■■□□ 2.54
AP3D1-207ENST00000589369 RIMBP3BA6NNM3 1639 aa30.91■■■□□ 2.54
AP3D1-207ENST00000589369 RIMBP3Q9UFD9 1639 aa30.91■■■□□ 2.54
AP3D1-207ENST00000589369 FGD5Q6ZNL6 1462 aa30.91■■■□□ 2.54
AP3D1-207ENST00000589369 TDRD9Q8NDG6 1382 aaKnown RBP30.88■■■□□ 2.53
AP3D1-207ENST00000589369 CHD1O14646 1710 aa30.87■■■□□ 2.53
AP3D1-207ENST00000589369 ARHGEF11O15085 1522 aa30.83■■■□□ 2.53
AP3D1-207ENST00000589369 FBLN2P98095 1184 aa30.77■■■□□ 2.52
AP3D1-207ENST00000589369 WDR97A6NE52 1622 aa30.76■■■□□ 2.52
AP3D1-207ENST00000589369 SNAPC4Q5SXM2 1469 aa30.73■■■□□ 2.51
AP3D1-207ENST00000589369 GRIN2BQ13224 1484 aa30.64■■■□□ 2.5
AP3D1-207ENST00000589369 MAGI1Q96QZ7 1491 aaPredicted RBP30.63■■■□□ 2.49
AP3D1-207ENST00000589369 CYB5RLQ6IPT4 315 aa30.58■■■□□ 2.49
AP3D1-207ENST00000589369 ABCA10Q8WWZ4 1543 aa30.57■■■□□ 2.48
AP3D1-207ENST00000589369 GAPVD1Q14C86 1478 aa30.57■■■□□ 2.48
AP3D1-207ENST00000589369 CHMP7Q8WUX9 453 aaPredicted RBP30.56■■■□□ 2.48
AP3D1-207ENST00000589369 ARAP1Q96P48 1450 aa30.55■■■□□ 2.48
AP3D1-207ENST00000589369 CLASP1Q7Z460 1538 aa30.54■■■□□ 2.48
AP3D1-207ENST00000589369 PBRM1Q86U86 1689 aa30.54■■■□□ 2.48
AP3D1-207ENST00000589369 SYNJ2O15056 1496 aa30.53■■■□□ 2.48
AP3D1-207ENST00000589369 ABCA5Q8WWZ7 1642 aa30.52■■■□□ 2.48
AP3D1-207ENST00000589369 SYNJ1O43426 1573 aa30.49■■■□□ 2.47
AP3D1-207ENST00000589369 BIVM-ERCC5R4GMW8 1640 aa30.45■■■□□ 2.47
AP3D1-207ENST00000589369 WRNQ14191 1432 aaPredicted RBP eCLIP30.45■■■□□ 2.46
AP3D1-207ENST00000589369 TOP2BQ02880 1626 aa30.44■■■□□ 2.46
AP3D1-207ENST00000589369 ADAMTS12P58397 1594 aa30.28■■■□□ 2.44
AP3D1-207ENST00000589369 GRIN2AQ12879 1464 aa30.26■■■□□ 2.44
AP3D1-207ENST00000589369 FHAD1B1AJZ9 1412 aa30.18■■■□□ 2.42
AP3D1-207ENST00000589369 CEP170Q5SW79 1584 aa30.17■■■□□ 2.42
AP3D1-207ENST00000589369 NUP160Q12769 1436 aa30.17■■■□□ 2.42
AP3D1-207ENST00000589369 ERICH3Q5RHP9 1530 aa30.17■■■□□ 2.42
AP3D1-207ENST00000589369 TRHP20396 242 aaPredicted RBP30.16■■■□□ 2.42
AP3D1-207ENST00000589369 ERCC6L2Q5T890 1561 aa30.11■■■□□ 2.41
AP3D1-207ENST00000589369 SHROOM2Q13796 1616 aa30.02■■■□□ 2.4
AP3D1-207ENST00000589369 IGF1RP08069 1367 aa29.85■■■□□ 2.37
AP3D1-207ENST00000589369 PRG4Q92954 1404 aaPredicted RBP29.85■■■□□ 2.37
AP3D1-207ENST00000589369 RUSC2Q8N2Y8 1516 aa29.85■■■□□ 2.37
AP3D1-207ENST00000589369 JPH4Q96JJ6 628 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms